RNA–Protein interactions for RNA: ENST00000566772.1

KARS-208, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-208ENST00000566772 RASGRP4Q8TDF6 673 aa8.39□□□□□ -1.07
KARS-208ENST00000566772 SRCIN1Q9C0H9 1055 aa8.39□□□□□ -1.07
KARS-208ENST00000566772 KCNMB2Q9Y691 235 aa8.39□□□□□ -1.07
KARS-208ENST00000566772 WASF2Q9Y6W5 498 aa8.39□□□□□ -1.07
KARS-208ENST00000566772 UNC13AQ9UPW8 1703 aa8.39□□□□□ -1.07
KARS-208ENST00000566772 PHKA2P46019 1235 aa8.38□□□□□ -1.07
KARS-208ENST00000566772 ARSDP51689 593 aa8.38□□□□□ -1.07
KARS-208ENST00000566772 NBPF1Q3BBV0 1214 aa8.38□□□□□ -1.07
KARS-208ENST00000566772 SLC27A3Q5K4L6 730 aa8.38□□□□□ -1.07
KARS-208ENST00000566772 GALNT12Q8IXK2 581 aa8.38□□□□□ -1.07
KARS-208ENST00000566772 CKAP2LQ8IYA6 745 aa8.38□□□□□ -1.07
KARS-208ENST00000566772 GPATCH3Q96I76 525 aa8.38□□□□□ -1.07
KARS-208ENST00000566772 SPON2Q9BUD6 331 aa8.38□□□□□ -1.07
KARS-208ENST00000566772 CWC22Q9HCG8 908 aaKnown RBP8.38□□□□□ -1.07
KARS-208ENST00000566772 MRPL42Q9Y6G3 142 aaKnown RBP8.38□□□□□ -1.07
KARS-208ENST00000566772 F6X3S4 739 aa8.37□□□□□ -1.07
KARS-208ENST00000566772 K7ELQ4 463 aaPredicted RBP8.37□□□□□ -1.07
KARS-208ENST00000566772 EREGO14944 169 aa8.37□□□□□ -1.07
KARS-208ENST00000566772 GRM2Q14416 872 aa8.37□□□□□ -1.07
KARS-208ENST00000566772 NFE2L2Q16236 605 aa8.37□□□□□ -1.07
KARS-208ENST00000566772 C1orf127Q8N9H9 656 aa8.37□□□□□ -1.07
KARS-208ENST00000566772 MRFAP1L1Q96HT8 127 aa8.37□□□□□ -1.07
KARS-208ENST00000566772 SEC16BQ96JE7 1060 aa8.37□□□□□ -1.07
KARS-208ENST00000566772 CHRDQ9H2X0 955 aa8.37□□□□□ -1.07
KARS-208ENST00000566772 ZDHHC3Q9NYG2 299 aa8.37□□□□□ -1.07
KARS-208ENST00000566772 CNTN3Q9P232 1028 aa8.37□□□□□ -1.07
KARS-208ENST00000566772 ADAMTS1Q9UHI8 967 aa8.37□□□□□ -1.07
KARS-208ENST00000566772 SSBP05455 408 aaKnown RBP eCLIP8.36□□□□□ -1.07
KARS-208ENST00000566772 SERINC3Q13530 473 aa8.36□□□□□ -1.07
KARS-208ENST00000566772 BTLAQ7Z6A9 289 aa8.36□□□□□ -1.07
KARS-208ENST00000566772 KIAA0825Q8IV33 1275 aa8.36□□□□□ -1.07
KARS-208ENST00000566772 RSRP1Q9BUV0 290 aa8.36□□□□□ -1.07
KARS-208ENST00000566772 NOC4LQ9BVI4 516 aaKnown RBP8.36□□□□□ -1.07
KARS-208ENST00000566772 SUV39H2Q9H5I1 410 aa8.36□□□□□ -1.07
KARS-208ENST00000566772 ANKIB1Q9P2G1 1089 aa8.36□□□□□ -1.07
KARS-208ENST00000566772 TTF2Q9UNY4 1162 aaKnown RBP8.36□□□□□ -1.07
KARS-208ENST00000566772 MINDY4BA8MYZ0 360 aa8.35□□□□□ -1.07
KARS-208ENST00000566772 TATP17735 454 aaPredicted RBP8.35□□□□□ -1.07
KARS-208ENST00000566772 GRNP28799 593 aaKnown RBP8.35□□□□□ -1.07
KARS-208ENST00000566772 NASPP49321 788 aaPredicted RBP8.35□□□□□ -1.07
KARS-208ENST00000566772 WDR4P57081 412 aaKnown RBP8.35□□□□□ -1.07
KARS-208ENST00000566772 BICDL1Q6ZP65 573 aa8.35□□□□□ -1.07
KARS-208ENST00000566772 TRIM56Q9BRZ2 755 aaKnown RBP8.35□□□□□ -1.07
KARS-208ENST00000566772 IRX2Q9BZI1 471 aaPredicted RBP8.35□□□□□ -1.07
KARS-208ENST00000566772 ZNF408Q9H9D4 720 aa8.35□□□□□ -1.07
KARS-208ENST00000566772 POTECB2RU33 542 aa8.34□□□□□ -1.07
KARS-208ENST00000566772 HSD3B2P26439 372 aa8.34□□□□□ -1.07
KARS-208ENST00000566772 GSTT1P30711 240 aa8.34□□□□□ -1.07
KARS-208ENST00000566772 GPC1P35052 558 aa8.34□□□□□ -1.07
KARS-208ENST00000566772 ETFBP38117 255 aa8.34□□□□□ -1.07
KARS-208ENST00000566772 SLC19A1P41440 591 aa8.34□□□□□ -1.07
KARS-208ENST00000566772 RNF144AP50876 292 aaPredicted RBP8.34□□□□□ -1.07
KARS-208ENST00000566772 MAP3K10Q02779 954 aa8.34□□□□□ -1.07
KARS-208ENST00000566772 NFX1Q12986 1120 aaKnown RBP8.34□□□□□ -1.07
KARS-208ENST00000566772 NBPF10Q6P3W6 841 aaKnown RBP8.34□□□□□ -1.07
KARS-208ENST00000566772 RELL1Q8IUW5 271 aa8.34□□□□□ -1.07
KARS-208ENST00000566772 EFR3BQ9Y2G0 817 aa8.34□□□□□ -1.07
KARS-208ENST00000566772 GPC6Q9Y625 555 aaPredicted RBP8.34□□□□□ -1.07
KARS-208ENST00000566772 MRVI1Q9Y6F6 885 aa8.34□□□□□ -1.07
KARS-208ENST00000566772 XRCC5P13010 732 aaKnown RBP8.33□□□□□ -1.08
KARS-208ENST00000566772 TIMP2P16035 220 aa8.33□□□□□ -1.08
KARS-208ENST00000566772 PTPROQ16827 1216 aa8.33□□□□□ -1.08
KARS-208ENST00000566772 NBPF6Q5VWK0 638 aa8.33□□□□□ -1.08
KARS-208ENST00000566772 LRRC69Q6ZNQ3 347 aa8.33□□□□□ -1.08
KARS-208ENST00000566772 C3orf58Q8NDZ4 430 aa8.33□□□□□ -1.08
KARS-208ENST00000566772 GLIS3Q8NEA6 775 aa8.33□□□□□ -1.08
KARS-208ENST00000566772 EAF1Q96JC9 268 aaPredicted RBP8.33□□□□□ -1.08
KARS-208ENST00000566772 NBPF4Q96M43 638 aa8.33□□□□□ -1.08
KARS-208ENST00000566772 ZIC5Q96T25 663 aa8.33□□□□□ -1.08
KARS-208ENST00000566772 INSM2Q96T92 566 aaPredicted RBP8.33□□□□□ -1.08
KARS-208ENST00000566772 GINM1Q9NU53 330 aa8.33□□□□□ -1.08
KARS-208ENST00000566772 XYLBO75191 536 aa8.32□□□□□ -1.08
KARS-208ENST00000566772 GBP2P32456 591 aaPredicted RBP8.32□□□□□ -1.08
KARS-208ENST00000566772 EIF4A3P38919 411 aaKnown RBP8.32□□□□□ -1.08
KARS-208ENST00000566772 CCDC85BQ15834 202 aaPredicted RBP8.32□□□□□ -1.08
KARS-208ENST00000566772 ANKS3Q6ZW76 656 aa8.32□□□□□ -1.08
KARS-208ENST00000566772 ZNF296Q8WUU4 475 aaPredicted RBP8.32□□□□□ -1.08
KARS-208ENST00000566772 MKL1Q969V6 931 aa8.32□□□□□ -1.08
KARS-208ENST00000566772 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.32□□□□□ -1.08
KARS-208ENST00000566772 ATP4AP20648 1035 aa8.31□□□□□ -1.08
KARS-208ENST00000566772 POU4F2Q12837 409 aa8.31□□□□□ -1.08
KARS-208ENST00000566772 FOXC1Q12948 553 aa8.31□□□□□ -1.08
KARS-208ENST00000566772 KIAA0319Q5VV43 1072 aa8.31□□□□□ -1.08
KARS-208ENST00000566772 TMEM74Q96NL1 305 aa8.31□□□□□ -1.08
KARS-208ENST00000566772 EHD4Q9H223 541 aa8.31□□□□□ -1.08
KARS-208ENST00000566772 LATS2Q9NRM7 1088 aa8.31□□□□□ -1.08
KARS-208ENST00000566772 PPP4R2Q9NY27 417 aa8.31□□□□□ -1.08
KARS-208ENST00000566772 ABI2Q9NYB9 513 aaPredicted RBP8.31□□□□□ -1.08
KARS-208ENST00000566772 A0A1W2PP55 124 aa8.3□□□□□ -1.08
KARS-208ENST00000566772 SPATA31C2B4DYI2 1134 aa8.3□□□□□ -1.08
KARS-208ENST00000566772 J3QL48 77 aa8.3□□□□□ -1.08
KARS-208ENST00000566772 RAB11FIP3O75154 756 aa8.3□□□□□ -1.08
KARS-208ENST00000566772 CLSTN1O94985 981 aa8.3□□□□□ -1.08
KARS-208ENST00000566772 CES1P23141 567 aa8.3□□□□□ -1.08
KARS-208ENST00000566772 FCGRTP55899 365 aa8.3□□□□□ -1.08
KARS-208ENST00000566772 IGBP1P78318 339 aa8.3□□□□□ -1.08
KARS-208ENST00000566772 PWP1Q13610 501 aa8.3□□□□□ -1.08
KARS-208ENST00000566772 MAP3K11Q16584 847 aa8.3□□□□□ -1.08
KARS-208ENST00000566772 ARSJQ5FYB0 599 aaPredicted RBP8.3□□□□□ -1.08
KARS-208ENST00000566772 SNIP1Q8TAD8 396 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms