RNA–Protein interactions for RNA: ENST00000566723.1

SMPD3-208, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-208ENST00000566723 DPP8Q6V1X1 898 aaPredicted RBP19.66■□□□□ 0.74
SMPD3-208ENST00000566723 TMC4Q7Z404 712 aa19.66■□□□□ 0.74
SMPD3-208ENST00000566723 FAM89AQ96GI7 184 aa19.66■□□□□ 0.74
SMPD3-208ENST00000566723 CLEC11AQ9Y240 323 aa19.66■□□□□ 0.74
SMPD3-208ENST00000566723 COL4A1P02462 1669 aa19.65■□□□□ 0.74
SMPD3-208ENST00000566723 SCNN1DP51172 638 aa19.65■□□□□ 0.74
SMPD3-208ENST00000566723 MPNDQ8N594 471 aa19.65■□□□□ 0.74
SMPD3-208ENST00000566723 C8orf58Q8NAV2 365 aa19.65■□□□□ 0.74
SMPD3-208ENST00000566723 PHAXQ9H814 394 aaKnown RBP19.65■□□□□ 0.74
SMPD3-208ENST00000566723 TRPM7Q96QT4 1865 aa19.65■□□□□ 0.74
SMPD3-208ENST00000566723 ITGBL1O95965 494 aaPredicted RBP19.64■□□□□ 0.73
SMPD3-208ENST00000566723 RIC3Q7Z5B4 369 aa19.64■□□□□ 0.73
SMPD3-208ENST00000566723 MYH3P11055 1940 aa19.64■□□□□ 0.73
SMPD3-208ENST00000566723 CACNA1FO60840 1977 aa19.64■□□□□ 0.73
SMPD3-208ENST00000566723 KIAA2012Q0VF49 1180 aa19.63■□□□□ 0.73
SMPD3-208ENST00000566723 SF3B3Q15393 1217 aaKnown RBP19.63■□□□□ 0.73
SMPD3-208ENST00000566723 CHMP4AQ9BY43 222 aa19.63■□□□□ 0.73
SMPD3-208ENST00000566723 ZNRF3Q9ULT6 936 aa19.63■□□□□ 0.73
SMPD3-208ENST00000566723 IRS4O14654 1257 aaPredicted RBP19.62■□□□□ 0.73
SMPD3-208ENST00000566723 CCDC27Q2M243 656 aa19.62■□□□□ 0.73
SMPD3-208ENST00000566723 RTL5Q5HYW3 569 aaPredicted RBP19.62■□□□□ 0.73
SMPD3-208ENST00000566723 CCDC30Q5VVM6 783 aa19.62■□□□□ 0.73
SMPD3-208ENST00000566723 MAP1SQ66K74 1059 aaPredicted RBP19.62■□□□□ 0.73
SMPD3-208ENST00000566723 MKRN1Q9UHC7 482 aaKnown RBP19.62■□□□□ 0.73
SMPD3-208ENST00000566723 CNTNAP1P78357 1384 aa19.61■□□□□ 0.73
SMPD3-208ENST00000566723 TMEM88BA6NKF7 163 aa19.61■□□□□ 0.73
SMPD3-208ENST00000566723 EPS15P42566 896 aa19.61■□□□□ 0.73
SMPD3-208ENST00000566723 CNTROBQ8N137 903 aa19.61■□□□□ 0.73
SMPD3-208ENST00000566723 ZBTB38Q8NAP3 1195 aaPredicted RBP19.61■□□□□ 0.73
SMPD3-208ENST00000566723 CELF1Q92879 486 aaKnown RBP19.61■□□□□ 0.73
SMPD3-208ENST00000566723 HSPA1AP0DMV8 641 aaKnown RBP19.6■□□□□ 0.73
SMPD3-208ENST00000566723 HSPA1BP0DMV9 641 aaKnown RBP19.6■□□□□ 0.73
SMPD3-208ENST00000566723 CXCL9Q07325 125 aa19.6■□□□□ 0.73
SMPD3-208ENST00000566723 TSPYL6Q8N831 410 aa19.6■□□□□ 0.73
SMPD3-208ENST00000566723 TSR2Q969E8 191 aaKnown RBP19.6■□□□□ 0.73
SMPD3-208ENST00000566723 MYD88Q99836 296 aa19.6■□□□□ 0.73
SMPD3-208ENST00000566723 DDX58O95786 925 aaKnown RBP19.59■□□□□ 0.73
SMPD3-208ENST00000566723 USP50Q70EL3 339 aaPredicted RBP19.59■□□□□ 0.73
SMPD3-208ENST00000566723 WWC1Q8IX03 1113 aa19.59■□□□□ 0.73
SMPD3-208ENST00000566723 CCDC191Q8NCU4 936 aa19.59■□□□□ 0.73
SMPD3-208ENST00000566723 GPRC5DQ9NZD1 345 aa19.59■□□□□ 0.73
SMPD3-208ENST00000566723 CDHR2Q9BYE9 1310 aa19.58■□□□□ 0.73
SMPD3-208ENST00000566723 HSP90B1P14625 803 aaKnown RBP19.58■□□□□ 0.72
SMPD3-208ENST00000566723 CIAPIN1Q6FI81 312 aa19.58■□□□□ 0.72
SMPD3-208ENST00000566723 METTL22Q9BUU2 404 aaPredicted RBP19.58■□□□□ 0.72
SMPD3-208ENST00000566723 MRS2Q9HD23 443 aa19.58■□□□□ 0.72
SMPD3-208ENST00000566723 SPEF2Q9C093 1822 aa19.58■□□□□ 0.72
SMPD3-208ENST00000566723 IL16Q14005 1332 aa19.57■□□□□ 0.72
SMPD3-208ENST00000566723 PCCAP05165 728 aaPredicted RBP19.57■□□□□ 0.72
SMPD3-208ENST00000566723 ADARB2Q9NS39 739 aaKnown RBP19.57■□□□□ 0.72
SMPD3-208ENST00000566723 CWC25Q9NXE8 425 aaPredicted RBP19.57■□□□□ 0.72
SMPD3-208ENST00000566723 ZNF316A6NFI3 1004 aaPredicted RBP19.56■□□□□ 0.72
SMPD3-208ENST00000566723 ANP32CO43423 234 aa19.56■□□□□ 0.72
SMPD3-208ENST00000566723 RAD17O75943 681 aa19.56■□□□□ 0.72
SMPD3-208ENST00000566723 GMPSP49915 693 aaPredicted RBP19.56■□□□□ 0.72
SMPD3-208ENST00000566723 TNIP1Q15025 636 aa19.56■□□□□ 0.72
SMPD3-208ENST00000566723 NCBP3Q53F19 620 aaKnown RBP19.56■□□□□ 0.72
SMPD3-208ENST00000566723 SCN9AQ15858 1988 aa19.55■□□□□ 0.72
SMPD3-208ENST00000566723 YDJCA8MPS7 323 aa19.55■□□□□ 0.72
SMPD3-208ENST00000566723 RPS8P62241 208 aaKnown RBP19.55■□□□□ 0.72
SMPD3-208ENST00000566723 COL13A1Q5TAT6 717 aaPredicted RBP19.55■□□□□ 0.72
SMPD3-208ENST00000566723 STK31Q9BXU1 1019 aa19.55■□□□□ 0.72
SMPD3-208ENST00000566723 NSFL1CQ9UNZ2 370 aaKnown RBP19.55■□□□□ 0.72
SMPD3-208ENST00000566723 MAP3K2Q9Y2U5 619 aa19.55■□□□□ 0.72
SMPD3-208ENST00000566723 PSME4Q14997 1843 aa19.55■□□□□ 0.72
SMPD3-208ENST00000566723 PDE8AO60658 829 aa19.54■□□□□ 0.72
SMPD3-208ENST00000566723 GPSM2P81274 684 aa19.54■□□□□ 0.72
SMPD3-208ENST00000566723 WASHC4Q2M389 1173 aa19.54■□□□□ 0.72
SMPD3-208ENST00000566723 TWISTNBQ3B726 338 aaPredicted RBP19.54■□□□□ 0.72
SMPD3-208ENST00000566723 CCDC152Q4G0S7 254 aa19.54■□□□□ 0.72
SMPD3-208ENST00000566723 RASSF10A6NK89 507 aa19.53■□□□□ 0.72
SMPD3-208ENST00000566723 C6orf229H3BNL8 230 aa19.53■□□□□ 0.72
SMPD3-208ENST00000566723 KSR2Q6VAB6 950 aa19.53■□□□□ 0.72
SMPD3-208ENST00000566723 BCL2L13Q9BXK5 485 aa19.53■□□□□ 0.72
SMPD3-208ENST00000566723 SEC31BQ9NQW1 1179 aa19.53■□□□□ 0.72
SMPD3-208ENST00000566723 POLLQ9UGP5 575 aa19.53■□□□□ 0.72
SMPD3-208ENST00000566723 THSD7BQ9C0I4 1608 aa19.52■□□□□ 0.72
SMPD3-208ENST00000566723 PI4KAP2A4QPH2 592 aa19.52■□□□□ 0.72
SMPD3-208ENST00000566723 VEGFBP49765 207 aa19.52■□□□□ 0.72
SMPD3-208ENST00000566723 PI4KAP1Q8N8J0 262 aa19.52■□□□□ 0.72
SMPD3-208ENST00000566723 EYA3Q99504 573 aa19.52■□□□□ 0.72
SMPD3-208ENST00000566723 DBNDD1Q9H9R9 158 aa19.52■□□□□ 0.72
SMPD3-208ENST00000566723 FANCIQ9NVI1 1328 aa19.51■□□□□ 0.71
SMPD3-208ENST00000566723 IGKV5-2P06315 115 aa19.51■□□□□ 0.71
SMPD3-208ENST00000566723 NEXNQ0ZGT2 675 aa19.51■□□□□ 0.71
SMPD3-208ENST00000566723 TBC1D16Q8TBP0 767 aa19.51■□□□□ 0.71
SMPD3-208ENST00000566723 JARID2Q92833 1246 aaPredicted RBP19.51■□□□□ 0.71
SMPD3-208ENST00000566723 PODXL2Q9NZ53 605 aa19.51■□□□□ 0.71
SMPD3-208ENST00000566723 ABT1Q9ULW3 272 aaKnown RBP19.51■□□□□ 0.71
SMPD3-208ENST00000566723 POLR2AP24928 1970 aaKnown RBP19.51■□□□□ 0.71
SMPD3-208ENST00000566723 RIMBP2O15034 1052 aa19.5■□□□□ 0.71
SMPD3-208ENST00000566723 CTSWP56202 376 aa19.5■□□□□ 0.71
SMPD3-208ENST00000566723 TRAF5O00463 557 aa19.49■□□□□ 0.71
SMPD3-208ENST00000566723 PSMD14O00487 310 aa19.49■□□□□ 0.71
SMPD3-208ENST00000566723 ECE2O60344 883 aa19.49■□□□□ 0.71
SMPD3-208ENST00000566723 FMR1Q06787 632 aaKnown RBP eCLIP19.49■□□□□ 0.71
SMPD3-208ENST00000566723 DEFB115Q30KQ5 88 aa19.49■□□□□ 0.71
SMPD3-208ENST00000566723 TRPM4Q8TD43 1214 aa19.49■□□□□ 0.71
SMPD3-208ENST00000566723 GPR101Q96P66 508 aaPredicted RBP19.49■□□□□ 0.71
SMPD3-208ENST00000566723 CCDC85AQ96PX6 553 aaPredicted RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms