RNA–Protein interactions for RNA: ENST00000566640.1

SIN3A-207, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 944 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-207ENST00000566640 CNBD1Q8NA66 436 aa9.28□□□□□ -0.92
SIN3A-207ENST00000566640 SMC1BQ8NDV3 1235 aa9.28□□□□□ -0.92
SIN3A-207ENST00000566640 ZNF330Q9Y3S2 320 aaPredicted RBP9.28□□□□□ -0.92
SIN3A-207ENST00000566640 TNRC6CQ9HCJ0 1690 aaKnown RBP9.27□□□□□ -0.93
SIN3A-207ENST00000566640 AFDNP55196 1824 aaKnown RBP9.27□□□□□ -0.93
SIN3A-207ENST00000566640 NBPF26B4DH59 902 aa9.27□□□□□ -0.93
SIN3A-207ENST00000566640 HTATSF1O43719 755 aaKnown RBP9.27□□□□□ -0.93
SIN3A-207ENST00000566640 C21orf2O43822 256 aa9.27□□□□□ -0.93
SIN3A-207ENST00000566640 VEGFAP15692 232 aaPredicted RBP9.27□□□□□ -0.93
SIN3A-207ENST00000566640 PIP4K2AP48426 406 aaPredicted RBP9.27□□□□□ -0.93
SIN3A-207ENST00000566640 VARS2Q5ST30 1063 aaKnown RBP9.27□□□□□ -0.93
SIN3A-207ENST00000566640 STYK1Q6J9G0 422 aa9.27□□□□□ -0.93
SIN3A-207ENST00000566640 NBPF10Q6P3W6 841 aaKnown RBP9.27□□□□□ -0.93
SIN3A-207ENST00000566640 CLEC4GQ6UXB4 293 aa9.27□□□□□ -0.93
SIN3A-207ENST00000566640 MCM10Q7L590 875 aa9.27□□□□□ -0.93
SIN3A-207ENST00000566640 NBPF15Q8N660 670 aa9.27□□□□□ -0.93
SIN3A-207ENST00000566640 ZNF622Q969S3 477 aaKnown RBP eCLIP9.27□□□□□ -0.93
SIN3A-207ENST00000566640 SETDB2Q96T68 719 aa9.27□□□□□ -0.93
SIN3A-207ENST00000566640 DAXXQ9UER7 740 aaPredicted RBP9.27□□□□□ -0.93
SIN3A-207ENST00000566640 MYBBP1AQ9BQG0 1328 aaKnown RBP9.27□□□□□ -0.93
SIN3A-207ENST00000566640 KLRG2A4D1S0 409 aaPredicted RBP9.26□□□□□ -0.93
SIN3A-207ENST00000566640 SNRPA1P09661 255 aaKnown RBP9.26□□□□□ -0.93
SIN3A-207ENST00000566640 DCTN1Q14203 1278 aa9.26□□□□□ -0.93
SIN3A-207ENST00000566640 RALBP1Q15311 655 aa9.26□□□□□ -0.93
SIN3A-207ENST00000566640 SMYD5Q6GMV2 418 aa9.26□□□□□ -0.93
SIN3A-207ENST00000566640 PRPF40BQ6NWY9 871 aaKnown RBP9.26□□□□□ -0.93
SIN3A-207ENST00000566640 C7orf43Q8WVR3 580 aa9.26□□□□□ -0.93
SIN3A-207ENST00000566640 DDX12PQ92771 950 aa9.26□□□□□ -0.93
SIN3A-207ENST00000566640 MAPK8IP3Q9UPT6 1336 aa9.26□□□□□ -0.93
SIN3A-207ENST00000566640 WDR90Q96KV7 1748 aa9.25□□□□□ -0.93
SIN3A-207ENST00000566640 PCNTO95613 3336 aa9.25□□□□□ -0.93
SIN3A-207ENST00000566640 GRXCR2A6NFK2 248 aa9.25□□□□□ -0.93
SIN3A-207ENST00000566640 ST5P78524 1137 aa9.25□□□□□ -0.93
SIN3A-207ENST00000566640 ERFEQ4G0M1 354 aa9.25□□□□□ -0.93
SIN3A-207ENST00000566640 RBM26Q5T8P6 1007 aaKnown RBP9.25□□□□□ -0.93
SIN3A-207ENST00000566640 RTF1Q92541 710 aaKnown RBP9.25□□□□□ -0.93
SIN3A-207ENST00000566640 CNKSR1Q969H4 720 aa9.25□□□□□ -0.93
SIN3A-207ENST00000566640 MASTLQ96GX5 879 aa9.25□□□□□ -0.93
SIN3A-207ENST00000566640 TAOK3Q9H2K8 898 aa9.25□□□□□ -0.93
SIN3A-207ENST00000566640 COL11A2P13942 1736 aaPredicted RBP9.25□□□□□ -0.93
SIN3A-207ENST00000566640 LAMB4A4D0S4 1761 aa9.24□□□□□ -0.93
SIN3A-207ENST00000566640 KDM3BQ7LBC6 1761 aa9.24□□□□□ -0.93
SIN3A-207ENST00000566640 ANKRD31Q8N7Z5 1873 aa9.24□□□□□ -0.93
SIN3A-207ENST00000566640 NEFMP07197 916 aa9.24□□□□□ -0.93
SIN3A-207ENST00000566640 NPM2Q86SE8 214 aaKnown RBP9.24□□□□□ -0.93
SIN3A-207ENST00000566640 CCDC146Q8IYE0 955 aa9.24□□□□□ -0.93
SIN3A-207ENST00000566640 BCORQ6W2J9 1755 aa9.23□□□□□ -0.93
SIN3A-207ENST00000566640 OSBPP22059 807 aa9.23□□□□□ -0.93
SIN3A-207ENST00000566640 TAF7Q15545 349 aaPredicted RBP9.23□□□□□ -0.93
SIN3A-207ENST00000566640 SOGA3Q5TF21 947 aa9.23□□□□□ -0.93
SIN3A-207ENST00000566640 NBPF5PQ86XG9 351 aaPredicted RBP9.23□□□□□ -0.93
SIN3A-207ENST00000566640 PLEKHF1Q96S99 279 aa9.23□□□□□ -0.93
SIN3A-207ENST00000566640 PRKRIP1Q9H875 184 aaPredicted RBP9.23□□□□□ -0.93
SIN3A-207ENST00000566640 ZNF652Q9Y2D9 606 aa9.23□□□□□ -0.93
SIN3A-207ENST00000566640 SBF1O95248 1867 aa9.23□□□□□ -0.93
SIN3A-207ENST00000566640 SNED1Q8TER0 1413 aa9.22□□□□□ -0.93
SIN3A-207ENST00000566640 TIAM2Q8IVF5 1701 aa9.22□□□□□ -0.93
SIN3A-207ENST00000566640 NPHP1O15259 732 aa9.22□□□□□ -0.93
SIN3A-207ENST00000566640 DDNO94850 711 aaPredicted RBP9.22□□□□□ -0.93
SIN3A-207ENST00000566640 NPR1P16066 1061 aa9.22□□□□□ -0.93
SIN3A-207ENST00000566640 WDR43Q15061 677 aaKnown RBP eCLIP9.22□□□□□ -0.93
SIN3A-207ENST00000566640 HLFQ16534 295 aa9.22□□□□□ -0.93
SIN3A-207ENST00000566640 CCDC93Q567U6 631 aa9.22□□□□□ -0.93
SIN3A-207ENST00000566640 COL13A1Q5TAT6 717 aaPredicted RBP9.22□□□□□ -0.93
SIN3A-207ENST00000566640 ZNF687Q8N1G0 1237 aa9.22□□□□□ -0.93
SIN3A-207ENST00000566640 THUMPD2Q9BTF0 503 aaKnown RBP9.22□□□□□ -0.93
SIN3A-207ENST00000566640 MIS18AQ9NYP9 233 aa9.22□□□□□ -0.93
SIN3A-207ENST00000566640 NIP7Q9Y221 180 aaKnown RBP eCLIP9.22□□□□□ -0.93
SIN3A-207ENST00000566640 EIF4A1P60842 406 aaKnown RBP9.21□□□□□ -0.94
SIN3A-207ENST00000566640 FKBP4Q02790 459 aaKnown RBP eCLIP9.21□□□□□ -0.94
SIN3A-207ENST00000566640 CRY2Q49AN0 593 aa9.21□□□□□ -0.94
SIN3A-207ENST00000566640 TPTE2Q6XPS3 522 aa9.21□□□□□ -0.94
SIN3A-207ENST00000566640 ZC3H15Q8WU90 426 aaKnown RBP9.21□□□□□ -0.94
SIN3A-207ENST00000566640 PLA2G2EQ9NZK7 142 aa9.21□□□□□ -0.94
SIN3A-207ENST00000566640 LHX6Q9UPM6 363 aa9.21□□□□□ -0.94
SIN3A-207ENST00000566640 RRP7AQ9Y3A4 280 aaKnown RBP9.21□□□□□ -0.94
SIN3A-207ENST00000566640 ABCC12Q96J65 1359 aa9.21□□□□□ -0.94
SIN3A-207ENST00000566640 ERVV-1B6SEH8 477 aa9.2□□□□□ -0.94
SIN3A-207ENST00000566640 NEUROD2Q15784 382 aa9.2□□□□□ -0.94
SIN3A-207ENST00000566640 NFE2L2Q16236 605 aa9.2□□□□□ -0.94
SIN3A-207ENST00000566640 OLFM4Q6UX06 510 aa9.2□□□□□ -0.94
SIN3A-207ENST00000566640 PNISRQ8TF01 805 aaKnown RBP9.2□□□□□ -0.94
SIN3A-207ENST00000566640 IBTKQ9P2D0 1353 aaPredicted RBP9.2□□□□□ -0.94
SIN3A-207ENST00000566640 RIC1Q4ADV7 1423 aa9.2□□□□□ -0.94
SIN3A-207ENST00000566640 FER1L6Q2WGJ9 1857 aa9.19□□□□□ -0.94
SIN3A-207ENST00000566640 TTLL7Q6ZT98 887 aa9.19□□□□□ -0.94
SIN3A-207ENST00000566640 LRP10Q7Z4F1 713 aa9.19□□□□□ -0.94
SIN3A-207ENST00000566640 ZNF454Q8N9F8 522 aa9.19□□□□□ -0.94
SIN3A-207ENST00000566640 TAF1DQ9H5J8 278 aaPredicted RBP9.19□□□□□ -0.94
SIN3A-207ENST00000566640 ZNF277Q9NRM2 450 aaPredicted RBP9.19□□□□□ -0.94
SIN3A-207ENST00000566640 MAP3K15Q6ZN16 1313 aa9.19□□□□□ -0.94
SIN3A-207ENST00000566640 UBN2Q6ZU65 1347 aa9.19□□□□□ -0.94
SIN3A-207ENST00000566640 PASKQ96RG2 1323 aa9.19□□□□□ -0.94
SIN3A-207ENST00000566640 ZNF541Q9H0D2 1346 aa9.19□□□□□ -0.94
SIN3A-207ENST00000566640 SLX4Q8IY92 1834 aa9.19□□□□□ -0.94
SIN3A-207ENST00000566640 IQCA1LA6NCM1 817 aa9.18□□□□□ -0.94
SIN3A-207ENST00000566640 FAM177BA6PVY3 158 aa9.18□□□□□ -0.94
SIN3A-207ENST00000566640 FZD9O00144 591 aa9.18□□□□□ -0.94
SIN3A-207ENST00000566640 HSPA1AP0DMV8 641 aaKnown RBP9.18□□□□□ -0.94
SIN3A-207ENST00000566640 HSPA1BP0DMV9 641 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms