RNA–Protein interactions for RNA: ENST00000566581.5

LPCAT4-206, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 1 (best)

Gene LPCAT4, Length 915 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-206ENST00000566581 LRRC37AA6NMS7 1700 aa16.2■□□□□ 0.18
LPCAT4-206ENST00000566581 POTECB2RU33 542 aa16.2■□□□□ 0.18
LPCAT4-206ENST00000566581 FZD9O00144 591 aa16.2■□□□□ 0.18
LPCAT4-206ENST00000566581 TCERG1O14776 1098 aaKnown RBP16.2■□□□□ 0.18
LPCAT4-206ENST00000566581 HSPA6P17066 643 aa16.2■□□□□ 0.18
LPCAT4-206ENST00000566581 ZNF428Q96B54 188 aa16.2■□□□□ 0.18
LPCAT4-206ENST00000566581 DDNO94850 711 aaPredicted RBP16.19■□□□□ 0.18
LPCAT4-206ENST00000566581 IGKV5-2P06315 115 aa16.19■□□□□ 0.18
LPCAT4-206ENST00000566581 NEXNQ0ZGT2 675 aa16.19■□□□□ 0.18
LPCAT4-206ENST00000566581 FSTL1Q12841 308 aa16.19■□□□□ 0.18
LPCAT4-206ENST00000566581 FLIIQ13045 1269 aa16.19■□□□□ 0.18
LPCAT4-206ENST00000566581 RTL5Q5HYW3 569 aaPredicted RBP16.19■□□□□ 0.18
LPCAT4-206ENST00000566581 JDP2Q8WYK2 163 aa16.19■□□□□ 0.18
LPCAT4-206ENST00000566581 L3MBTL3Q96JM7 780 aaPredicted RBP16.19■□□□□ 0.18
LPCAT4-206ENST00000566581 RTFDC1Q9BY42 306 aaPredicted RBP16.19■□□□□ 0.18
LPCAT4-206ENST00000566581 CDHR2Q9BYE9 1310 aa16.18■□□□□ 0.18
LPCAT4-206ENST00000566581 PDE8AO60658 829 aa16.17■□□□□ 0.18
LPCAT4-206ENST00000566581 SUPT20HQ8NEM7 779 aa16.17■□□□□ 0.18
LPCAT4-206ENST00000566581 NEURL1BA8MQ27 555 aa16.16■□□□□ 0.18
LPCAT4-206ENST00000566581 RPS8P62241 208 aaKnown RBP16.16■□□□□ 0.18
LPCAT4-206ENST00000566581 FKBP5Q13451 457 aaPredicted RBP16.16■□□□□ 0.18
LPCAT4-206ENST00000566581 SLC51AQ86UW1 340 aa16.16■□□□□ 0.18
LPCAT4-206ENST00000566581 LARGE2Q8N3Y3 721 aa16.16■□□□□ 0.18
LPCAT4-206ENST00000566581 MPNDQ8N594 471 aa16.16■□□□□ 0.18
LPCAT4-206ENST00000566581 SMC1BQ8NDV3 1235 aa16.16■□□□□ 0.18
LPCAT4-206ENST00000566581 COL4A5P29400 1685 aa16.15■□□□□ 0.18
LPCAT4-206ENST00000566581 IQCA1LA6NCM1 817 aa16.15■□□□□ 0.18
LPCAT4-206ENST00000566581 CCDC152Q4G0S7 254 aa16.15■□□□□ 0.18
LPCAT4-206ENST00000566581 DPP8Q6V1X1 898 aaPredicted RBP16.15■□□□□ 0.18
LPCAT4-206ENST00000566581 GPC2Q8N158 579 aa16.15■□□□□ 0.18
LPCAT4-206ENST00000566581 DNAAF4Q8WXU2 420 aa16.15■□□□□ 0.18
LPCAT4-206ENST00000566581 CELF1Q92879 486 aaKnown RBP16.15■□□□□ 0.18
LPCAT4-206ENST00000566581 ZNF541Q9H0D2 1346 aa16.15■□□□□ 0.18
LPCAT4-206ENST00000566581 E9PSI1 815 aa16.14■□□□□ 0.17
LPCAT4-206ENST00000566581 H7C1W4 665 aa16.14■□□□□ 0.17
LPCAT4-206ENST00000566581 APLP1P51693 650 aa16.14■□□□□ 0.17
LPCAT4-206ENST00000566581 CWF19L2Q2TBE0 894 aaKnown RBP16.14■□□□□ 0.17
LPCAT4-206ENST00000566581 LINS1Q8NG48 757 aa16.14■□□□□ 0.17
LPCAT4-206ENST00000566581 LTBP1Q14766 1721 aa16.14■□□□□ 0.17
LPCAT4-206ENST00000566581 PPIP5K2O43314 1243 aa16.13■□□□□ 0.17
LPCAT4-206ENST00000566581 EIF6P56537 245 aaKnown RBP16.13■□□□□ 0.17
LPCAT4-206ENST00000566581 KIAA2012Q0VF49 1180 aa16.13■□□□□ 0.17
LPCAT4-206ENST00000566581 GCKRQ14397 625 aa16.13■□□□□ 0.17
LPCAT4-206ENST00000566581 JARID2Q92833 1246 aaPredicted RBP16.13■□□□□ 0.17
LPCAT4-206ENST00000566581 COL4A1P02462 1669 aa16.13■□□□□ 0.17
LPCAT4-206ENST00000566581 SLFN5Q08AF3 891 aa16.12■□□□□ 0.17
LPCAT4-206ENST00000566581 AOC3Q16853 763 aa16.12■□□□□ 0.17
LPCAT4-206ENST00000566581 NIM1KQ8IY84 436 aa16.12■□□□□ 0.17
LPCAT4-206ENST00000566581 SEC31BQ9NQW1 1179 aa16.12■□□□□ 0.17
LPCAT4-206ENST00000566581 DUOX1Q9NRD9 1551 aa16.12■□□□□ 0.17
LPCAT4-206ENST00000566581 CTSWP56202 376 aa16.11■□□□□ 0.17
LPCAT4-206ENST00000566581 TTLL11Q8NHH1 800 aa16.11■□□□□ 0.17
LPCAT4-206ENST00000566581 PLA2G12BQ9BX93 195 aa16.11■□□□□ 0.17
LPCAT4-206ENST00000566581 TAF1DQ9H5J8 278 aaPredicted RBP16.11■□□□□ 0.17
LPCAT4-206ENST00000566581 ZNRF3Q9ULT6 936 aa16.11■□□□□ 0.17
LPCAT4-206ENST00000566581 NSFL1CQ9UNZ2 370 aaKnown RBP16.11■□□□□ 0.17
LPCAT4-206ENST00000566581 CASP7P55210 303 aa16.1■□□□□ 0.17
LPCAT4-206ENST00000566581 UBE3BQ7Z3V4 1068 aa16.1■□□□□ 0.17
LPCAT4-206ENST00000566581 TRMT2AQ8IZ69 625 aaKnown RBP16.1■□□□□ 0.17
LPCAT4-206ENST00000566581 PODXL2Q9NZ53 605 aa16.1■□□□□ 0.17
LPCAT4-206ENST00000566581 HACL1Q9UJ83 578 aa16.1■□□□□ 0.17
LPCAT4-206ENST00000566581 RTL9Q8NET4 1388 aa16.1■□□□□ 0.17
LPCAT4-206ENST00000566581 SPEF2Q9C093 1822 aa16.1■□□□□ 0.17
LPCAT4-206ENST00000566581 BEND3Q5T5X7 828 aa16.09■□□□□ 0.17
LPCAT4-206ENST00000566581 CHADLQ6NUI6 762 aa16.09■□□□□ 0.17
LPCAT4-206ENST00000566581 ADAMTSL1Q8N6G6 1762 aa16.08■□□□□ 0.17
LPCAT4-206ENST00000566581 F6X3S4 739 aa16.08■□□□□ 0.16
LPCAT4-206ENST00000566581 GPSM2P81274 684 aa16.08■□□□□ 0.16
LPCAT4-206ENST00000566581 CXCL9Q07325 125 aa16.08■□□□□ 0.16
LPCAT4-206ENST00000566581 WASHC4Q2M389 1173 aa16.08■□□□□ 0.16
LPCAT4-206ENST00000566581 PNMA8AQ86V59 439 aaPredicted RBP16.08■□□□□ 0.16
LPCAT4-206ENST00000566581 LDHDQ86WU2 507 aa16.08■□□□□ 0.16
LPCAT4-206ENST00000566581 ANKRD18AQ8IVF6 992 aa16.08■□□□□ 0.16
LPCAT4-206ENST00000566581 CDC5LQ99459 802 aaKnown RBP16.08■□□□□ 0.16
LPCAT4-206ENST00000566581 POLLQ9UGP5 575 aa16.08■□□□□ 0.16
LPCAT4-206ENST00000566581 GJA3Q9Y6H8 435 aa16.08■□□□□ 0.16
LPCAT4-206ENST00000566581 PCNTO95613 3336 aa16.07■□□□□ 0.16
LPCAT4-206ENST00000566581 CSF1RP07333 972 aa16.07■□□□□ 0.16
LPCAT4-206ENST00000566581 EPHX2P34913 555 aa16.07■□□□□ 0.16
LPCAT4-206ENST00000566581 DIEXFQ68CQ4 756 aaKnown RBP16.07■□□□□ 0.16
LPCAT4-206ENST00000566581 TBC1D16Q8TBP0 767 aa16.07■□□□□ 0.16
LPCAT4-206ENST00000566581 CDCA7LQ96GN5 454 aa16.07■□□□□ 0.16
LPCAT4-206ENST00000566581 SCN9AQ15858 1988 aa16.06■□□□□ 0.16
LPCAT4-206ENST00000566581 C6orf229H3BNL8 230 aa16.06■□□□□ 0.16
LPCAT4-206ENST00000566581 ALDH1L1O75891 902 aa16.06■□□□□ 0.16
LPCAT4-206ENST00000566581 POTEIP0CG38 1075 aa16.06■□□□□ 0.16
LPCAT4-206ENST00000566581 POTEJP0CG39 1038 aa16.06■□□□□ 0.16
LPCAT4-206ENST00000566581 SCNN1DP51172 638 aa16.06■□□□□ 0.16
LPCAT4-206ENST00000566581 TNIP1Q15025 636 aa16.06■□□□□ 0.16
LPCAT4-206ENST00000566581 MRPL50Q8N5N7 158 aaKnown RBP16.06■□□□□ 0.16
LPCAT4-206ENST00000566581 DNAJC5GQ8N7S2 189 aa16.06■□□□□ 0.16
LPCAT4-206ENST00000566581 CCDC85AQ96PX6 553 aaPredicted RBP16.06■□□□□ 0.16
LPCAT4-206ENST00000566581 EYA3Q99504 573 aa16.06■□□□□ 0.16
LPCAT4-206ENST00000566581 GREM2Q9H772 168 aa16.06■□□□□ 0.16
LPCAT4-206ENST00000566581 BSDC1Q9NW68 430 aaPredicted RBP16.06■□□□□ 0.16
LPCAT4-206ENST00000566581 PSME4Q14997 1843 aa16.05■□□□□ 0.16
LPCAT4-206ENST00000566581 CT47B1P0C2W7 299 aaPredicted RBP16.05■□□□□ 0.16
LPCAT4-206ENST00000566581 LMOD1P29536 600 aaPredicted RBP16.05■□□□□ 0.16
LPCAT4-206ENST00000566581 CIAPIN1Q6FI81 312 aa16.05■□□□□ 0.16
LPCAT4-206ENST00000566581 ANKIB1Q9P2G1 1089 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms