RNA–Protein interactions for RNA: ENST00000566482.5

CNEP1R1-208, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-208ENST00000566482 GRAPLQ8TC17 118 aaPredicted RBP16.4■□□□□ 0.22
CNEP1R1-208ENST00000566482 TIAM2Q8IVF5 1701 aa16.39■□□□□ 0.21
CNEP1R1-208ENST00000566482 H7C1W4 665 aa16.39■□□□□ 0.21
CNEP1R1-208ENST00000566482 BBOX1O75936 387 aa16.39■□□□□ 0.21
CNEP1R1-208ENST00000566482 BEND3Q5T5X7 828 aa16.39■□□□□ 0.21
CNEP1R1-208ENST00000566482 UBE3BQ7Z3V4 1068 aa16.39■□□□□ 0.21
CNEP1R1-208ENST00000566482 SMC4Q9NTJ3 1288 aa16.39■□□□□ 0.21
CNEP1R1-208ENST00000566482 ATP6V0A2Q9Y487 856 aa16.39■□□□□ 0.21
CNEP1R1-208ENST00000566482 TAF1P21675 1872 aa16.39■□□□□ 0.21
CNEP1R1-208ENST00000566482 COL4A1P02462 1669 aa16.38■□□□□ 0.21
CNEP1R1-208ENST00000566482 SLC4A10Q6U841 1118 aa16.38■□□□□ 0.21
CNEP1R1-208ENST00000566482 GPBP1L1Q9HC44 474 aaPredicted RBP16.38■□□□□ 0.21
CNEP1R1-208ENST00000566482 ZNF277Q9NRM2 450 aaPredicted RBP16.38■□□□□ 0.21
CNEP1R1-208ENST00000566482 ZC3H4Q9UPT8 1303 aaKnown RBP16.38■□□□□ 0.21
CNEP1R1-208ENST00000566482 CASP7P55210 303 aa16.37■□□□□ 0.21
CNEP1R1-208ENST00000566482 CTSWP56202 376 aa16.37■□□□□ 0.21
CNEP1R1-208ENST00000566482 CCDC152Q4G0S7 254 aa16.37■□□□□ 0.21
CNEP1R1-208ENST00000566482 CELF1Q92879 486 aaKnown RBP16.37■□□□□ 0.21
CNEP1R1-208ENST00000566482 PSMD1Q99460 953 aa16.37■□□□□ 0.21
CNEP1R1-208ENST00000566482 PTPRCP08575 1304 aa16.37■□□□□ 0.21
CNEP1R1-208ENST00000566482 DICER1Q9UPY3 1922 aaKnown RBP16.37■□□□□ 0.21
CNEP1R1-208ENST00000566482 GRIPAP1Q4V328 841 aa16.36■□□□□ 0.21
CNEP1R1-208ENST00000566482 SP8Q8IXZ3 490 aa16.36■□□□□ 0.21
CNEP1R1-208ENST00000566482 CCDC85AQ96PX6 553 aaPredicted RBP16.36■□□□□ 0.21
CNEP1R1-208ENST00000566482 TMX4Q9H1E5 349 aaPredicted RBP16.36■□□□□ 0.21
CNEP1R1-208ENST00000566482 SEC31BQ9NQW1 1179 aa16.36■□□□□ 0.21
CNEP1R1-208ENST00000566482 ZBED9Q6R2W3 1325 aa16.36■□□□□ 0.21
CNEP1R1-208ENST00000566482 ALDH1L1O75891 902 aa16.35■□□□□ 0.21
CNEP1R1-208ENST00000566482 RARSP54136 660 aaKnown RBP16.35■□□□□ 0.21
CNEP1R1-208ENST00000566482 TMC4Q7Z404 712 aa16.35■□□□□ 0.21
CNEP1R1-208ENST00000566482 SRCIN1Q9C0H9 1055 aa16.35■□□□□ 0.21
CNEP1R1-208ENST00000566482 MYH3P11055 1940 aa16.35■□□□□ 0.21
CNEP1R1-208ENST00000566482 LRRC37AA6NMS7 1700 aa16.34■□□□□ 0.21
CNEP1R1-208ENST00000566482 IARSP41252 1262 aaKnown RBP16.34■□□□□ 0.21
CNEP1R1-208ENST00000566482 RPS8P62241 208 aaKnown RBP16.34■□□□□ 0.21
CNEP1R1-208ENST00000566482 TTLL11Q8NHH1 800 aa16.34■□□□□ 0.21
CNEP1R1-208ENST00000566482 PLA2G12BQ9BX93 195 aa16.34■□□□□ 0.21
CNEP1R1-208ENST00000566482 GRM8O00222 908 aa16.33■□□□□ 0.2
CNEP1R1-208ENST00000566482 DPP8Q6V1X1 898 aaPredicted RBP16.33■□□□□ 0.2
CNEP1R1-208ENST00000566482 GREM2Q9H772 168 aa16.33■□□□□ 0.2
CNEP1R1-208ENST00000566482 NMRK2Q9NPI5 230 aa16.33■□□□□ 0.2
CNEP1R1-208ENST00000566482 KDM2BQ8NHM5 1336 aa16.33■□□□□ 0.2
CNEP1R1-208ENST00000566482 GLTPD2A6NH11 291 aa16.32■□□□□ 0.2
CNEP1R1-208ENST00000566482 BRPF1P55201 1214 aaPredicted RBP16.32■□□□□ 0.2
CNEP1R1-208ENST00000566482 MPNDQ8N594 471 aa16.32■□□□□ 0.2
CNEP1R1-208ENST00000566482 RTL9Q8NET4 1388 aa16.32■□□□□ 0.2
CNEP1R1-208ENST00000566482 RTFDC1Q9BY42 306 aaPredicted RBP16.32■□□□□ 0.2
CNEP1R1-208ENST00000566482 COL4A5P29400 1685 aa16.31■□□□□ 0.2
CNEP1R1-208ENST00000566482 ANKRD18AQ8IVF6 992 aa16.31■□□□□ 0.2
CNEP1R1-208ENST00000566482 SUPT20HQ8NEM7 779 aa16.31■□□□□ 0.2
CNEP1R1-208ENST00000566482 C9orf78Q9NZ63 289 aaPredicted RBP16.31■□□□□ 0.2
CNEP1R1-208ENST00000566482 NOB1Q9ULX3 412 aaKnown RBP16.31■□□□□ 0.2
CNEP1R1-208ENST00000566482 DUOX1Q9NRD9 1551 aa16.3■□□□□ 0.2
CNEP1R1-208ENST00000566482 KIF3CO14782 793 aa16.3■□□□□ 0.2
CNEP1R1-208ENST00000566482 CSF1RP07333 972 aa16.3■□□□□ 0.2
CNEP1R1-208ENST00000566482 FOXO4P98177 505 aa16.3■□□□□ 0.2
CNEP1R1-208ENST00000566482 FAM161AQ3B820 660 aa16.3■□□□□ 0.2
CNEP1R1-208ENST00000566482 LARGE2Q8N3Y3 721 aa16.3■□□□□ 0.2
CNEP1R1-208ENST00000566482 CDC5LQ99459 802 aaKnown RBP16.3■□□□□ 0.2
CNEP1R1-208ENST00000566482 KIF16BQ96L93 1317 aa16.29■□□□□ 0.2
CNEP1R1-208ENST00000566482 ZNF541Q9H0D2 1346 aa16.29■□□□□ 0.2
CNEP1R1-208ENST00000566482 PPIP5K2O43314 1243 aa16.29■□□□□ 0.2
CNEP1R1-208ENST00000566482 GPSM2P81274 684 aa16.29■□□□□ 0.2
CNEP1R1-208ENST00000566482 AOC3Q16853 763 aa16.29■□□□□ 0.2
CNEP1R1-208ENST00000566482 DPY19L2Q6NUT2 758 aa16.29■□□□□ 0.2
CNEP1R1-208ENST00000566482 JDP2Q8WYK2 163 aa16.29■□□□□ 0.2
CNEP1R1-208ENST00000566482 LTBP1Q14766 1721 aa16.28■□□□□ 0.2
CNEP1R1-208ENST00000566482 UTYO14607 1347 aa16.28■□□□□ 0.2
CNEP1R1-208ENST00000566482 ITGA6P23229 1130 aa16.28■□□□□ 0.2
CNEP1R1-208ENST00000566482 EPHA10Q5JZY3 1008 aa16.28■□□□□ 0.2
CNEP1R1-208ENST00000566482 API5Q9BZZ5 524 aaKnown RBP16.28■□□□□ 0.2
CNEP1R1-208ENST00000566482 VPS33BQ9H267 617 aa16.28■□□□□ 0.2
CNEP1R1-208ENST00000566482 RRAGCQ9HB90 399 aa16.28■□□□□ 0.2
CNEP1R1-208ENST00000566482 NSFL1CQ9UNZ2 370 aaKnown RBP16.28■□□□□ 0.2
CNEP1R1-208ENST00000566482 SPEF2Q9C093 1822 aa16.28■□□□□ 0.2
CNEP1R1-208ENST00000566482 FZD9O00144 591 aa16.27■□□□□ 0.2
CNEP1R1-208ENST00000566482 BCAR3O75815 825 aa16.27■□□□□ 0.2
CNEP1R1-208ENST00000566482 DDNO94850 711 aaPredicted RBP16.27■□□□□ 0.2
CNEP1R1-208ENST00000566482 NBPF7P0C2Y1 421 aaPredicted RBP16.27■□□□□ 0.2
CNEP1R1-208ENST00000566482 LMBR1LQ6UX01 489 aa16.27■□□□□ 0.2
CNEP1R1-208ENST00000566482 NIM1KQ8IY84 436 aa16.27■□□□□ 0.2
CNEP1R1-208ENST00000566482 SUCLG2Q96I99 432 aa16.27■□□□□ 0.2
CNEP1R1-208ENST00000566482 WDR90Q96KV7 1748 aa16.26■□□□□ 0.19
CNEP1R1-208ENST00000566482 C6orf229H3BNL8 230 aa16.26■□□□□ 0.19
CNEP1R1-208ENST00000566482 KIAA2012Q0VF49 1180 aa16.26■□□□□ 0.19
CNEP1R1-208ENST00000566482 BSDC1Q9NW68 430 aaPredicted RBP16.26■□□□□ 0.19
CNEP1R1-208ENST00000566482 PODXL2Q9NZ53 605 aa16.26■□□□□ 0.19
CNEP1R1-208ENST00000566482 POLLQ9UGP5 575 aa16.26■□□□□ 0.19
CNEP1R1-208ENST00000566482 CHMP3Q9Y3E7 222 aa16.26■□□□□ 0.19
CNEP1R1-208ENST00000566482 ANKRD18BA2A2Z9 1011 aa16.25■□□□□ 0.19
CNEP1R1-208ENST00000566482 IGHMBP2P38935 993 aaKnown RBP16.25■□□□□ 0.19
CNEP1R1-208ENST00000566482 CCT4P50991 539 aaKnown RBP16.25■□□□□ 0.19
CNEP1R1-208ENST00000566482 C1QTNF8P60827 252 aa16.25■□□□□ 0.19
CNEP1R1-208ENST00000566482 TBC1D16Q8TBP0 767 aa16.25■□□□□ 0.19
CNEP1R1-208ENST00000566482 ARHGAP45Q92619 1136 aa16.25■□□□□ 0.19
CNEP1R1-208ENST00000566482 KAZALD1Q96I82 304 aa16.25■□□□□ 0.19
CNEP1R1-208ENST00000566482 USP44Q9H0E7 712 aa16.25■□□□□ 0.19
CNEP1R1-208ENST00000566482 ANKIB1Q9P2G1 1089 aa16.25■□□□□ 0.19
CNEP1R1-208ENST00000566482 POTECB2RU33 542 aa16.24■□□□□ 0.19
CNEP1R1-208ENST00000566482 UFL1O94874 794 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms