RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 MPNDQ8N594 471 aa26.03■■□□□ 1.76
CLN6-207ENST00000566347 ZNF428Q96B54 188 aa26.03■■□□□ 1.76
CLN6-207ENST00000566347 GJA3Q9Y6H8 435 aa26.03■■□□□ 1.76
CLN6-207ENST00000566347 DDX58O95786 925 aaKnown RBP26.02■■□□□ 1.76
CLN6-207ENST00000566347 SF3B3Q15393 1217 aaKnown RBP26.02■■□□□ 1.76
CLN6-207ENST00000566347 WWC1Q8IX03 1113 aa26.02■■□□□ 1.76
CLN6-207ENST00000566347 HSP90B1P14625 803 aaKnown RBP26.01■■□□□ 1.75
CLN6-207ENST00000566347 AOC3Q16853 763 aa26.01■■□□□ 1.75
CLN6-207ENST00000566347 IRS4O14654 1257 aaPredicted RBP26■■□□□ 1.75
CLN6-207ENST00000566347 LMOD1P29536 600 aaPredicted RBP26■■□□□ 1.75
CLN6-207ENST00000566347 ZBTB38Q8NAP3 1195 aaPredicted RBP26■■□□□ 1.75
CLN6-207ENST00000566347 TSR2Q969E8 191 aaKnown RBP26■■□□□ 1.75
CLN6-207ENST00000566347 IL16Q14005 1332 aa25.99■■□□□ 1.75
CLN6-207ENST00000566347 TSPYL6Q8N831 410 aa25.99■■□□□ 1.75
CLN6-207ENST00000566347 MYD88Q99836 296 aa25.99■■□□□ 1.75
CLN6-207ENST00000566347 CREBZFQ9NS37 354 aa25.99■■□□□ 1.75
CLN6-207ENST00000566347 CLEC11AQ9Y240 323 aa25.99■■□□□ 1.75
CLN6-207ENST00000566347 TAF1P21675 1872 aa25.99■■□□□ 1.75
CLN6-207ENST00000566347 ADAMTSL1Q8N6G6 1762 aa25.99■■□□□ 1.75
CLN6-207ENST00000566347 LRRC37AA6NMS7 1700 aa25.98■■□□□ 1.75
CLN6-207ENST00000566347 RTL5Q5HYW3 569 aaPredicted RBP25.98■■□□□ 1.75
CLN6-207ENST00000566347 CCDC191Q8NCU4 936 aa25.98■■□□□ 1.75
CLN6-207ENST00000566347 ZNRF3Q9ULT6 936 aa25.98■■□□□ 1.75
CLN6-207ENST00000566347 PASKQ96RG2 1323 aa25.97■■□□□ 1.75
CLN6-207ENST00000566347 KIAA2012Q0VF49 1180 aa25.97■■□□□ 1.75
CLN6-207ENST00000566347 STK31Q9BXU1 1019 aa25.97■■□□□ 1.75
CLN6-207ENST00000566347 METTL22Q9BUU2 404 aaPredicted RBP25.96■■□□□ 1.75
CLN6-207ENST00000566347 SCNN1DP51172 638 aa25.95■■□□□ 1.74
CLN6-207ENST00000566347 CELF1Q92879 486 aaKnown RBP25.95■■□□□ 1.74
CLN6-207ENST00000566347 CWC25Q9NXE8 425 aaPredicted RBP25.95■■□□□ 1.74
CLN6-207ENST00000566347 ITGBL1O95965 494 aaPredicted RBP25.94■■□□□ 1.74
CLN6-207ENST00000566347 PCCAP05165 728 aaPredicted RBP25.94■■□□□ 1.74
CLN6-207ENST00000566347 TWISTNBQ3B726 338 aaPredicted RBP25.94■■□□□ 1.74
CLN6-207ENST00000566347 LTBP1Q14766 1721 aa25.94■■□□□ 1.74
CLN6-207ENST00000566347 KSR2Q6VAB6 950 aa25.93■■□□□ 1.74
CLN6-207ENST00000566347 MAP3K2Q9Y2U5 619 aa25.93■■□□□ 1.74
CLN6-207ENST00000566347 DUOX1Q9NRD9 1551 aa25.92■■□□□ 1.74
CLN6-207ENST00000566347 CXCL9Q07325 125 aa25.92■■□□□ 1.74
CLN6-207ENST00000566347 CNTROBQ8N137 903 aa25.92■■□□□ 1.74
CLN6-207ENST00000566347 PCNTO95613 3336 aa25.91■■□□□ 1.74
CLN6-207ENST00000566347 EPS15P42566 896 aa25.91■■□□□ 1.74
CLN6-207ENST00000566347 RPS8P62241 208 aaKnown RBP25.91■■□□□ 1.74
CLN6-207ENST00000566347 USP50Q70EL3 339 aaPredicted RBP25.91■■□□□ 1.74
CLN6-207ENST00000566347 NSFL1CQ9UNZ2 370 aaKnown RBP25.91■■□□□ 1.74
CLN6-207ENST00000566347 PI4KAP2A4QPH2 592 aa25.9■■□□□ 1.74
CLN6-207ENST00000566347 TMEM88BA6NKF7 163 aa25.9■■□□□ 1.74
CLN6-207ENST00000566347 PDE8AO60658 829 aa25.9■■□□□ 1.74
CLN6-207ENST00000566347 NEXNQ0ZGT2 675 aa25.9■■□□□ 1.74
CLN6-207ENST00000566347 TNIP1Q15025 636 aa25.9■■□□□ 1.74
CLN6-207ENST00000566347 CCDC152Q4G0S7 254 aa25.9■■□□□ 1.74
CLN6-207ENST00000566347 IFFO2Q5TF58 517 aa25.9■■□□□ 1.74
CLN6-207ENST00000566347 MAP1SQ66K74 1059 aaPredicted RBP25.9■■□□□ 1.74
CLN6-207ENST00000566347 CIAPIN1Q6FI81 312 aa25.9■■□□□ 1.74
CLN6-207ENST00000566347 WDR63Q8IWG1 891 aa25.9■■□□□ 1.74
CLN6-207ENST00000566347 PI4KAP1Q8N8J0 262 aa25.9■■□□□ 1.74
CLN6-207ENST00000566347 CDHR2Q9BYE9 1310 aa25.89■■□□□ 1.74
CLN6-207ENST00000566347 WASHC4Q2M389 1173 aa25.89■■□□□ 1.74
CLN6-207ENST00000566347 GPRC5DQ9NZD1 345 aa25.89■■□□□ 1.74
CLN6-207ENST00000566347 ADARB2Q9NS39 739 aaKnown RBP25.88■■□□□ 1.73
CLN6-207ENST00000566347 FANCIQ9NVI1 1328 aa25.88■■□□□ 1.73
CLN6-207ENST00000566347 C6orf229H3BNL8 230 aa25.87■■□□□ 1.73
CLN6-207ENST00000566347 SLC4A2P04920 1241 aa25.87■■□□□ 1.73
CLN6-207ENST00000566347 GPSM2P81274 684 aa25.87■■□□□ 1.73
CLN6-207ENST00000566347 EYA3Q99504 573 aa25.87■■□□□ 1.73
CLN6-207ENST00000566347 MKRN1Q9UHC7 482 aaKnown RBP25.87■■□□□ 1.73
CLN6-207ENST00000566347 COL4A1P02462 1669 aa25.87■■□□□ 1.73
CLN6-207ENST00000566347 CNTNAP1P78357 1384 aa25.86■■□□□ 1.73
CLN6-207ENST00000566347 RAD17O75943 681 aa25.86■■□□□ 1.73
CLN6-207ENST00000566347 IGKV5-2P06315 115 aa25.86■■□□□ 1.73
CLN6-207ENST00000566347 GMPSP49915 693 aaPredicted RBP25.86■■□□□ 1.73
CLN6-207ENST00000566347 CACNA1FO60840 1977 aa25.86■■□□□ 1.73
CLN6-207ENST00000566347 BCL2L13Q9BXK5 485 aa25.85■■□□□ 1.73
CLN6-207ENST00000566347 SEC31BQ9NQW1 1179 aa25.85■■□□□ 1.73
CLN6-207ENST00000566347 POLLQ9UGP5 575 aa25.85■■□□□ 1.73
CLN6-207ENST00000566347 SALL2Q9Y467 1007 aaPredicted RBP25.85■■□□□ 1.73
CLN6-207ENST00000566347 YDJCA8MPS7 323 aa25.84■■□□□ 1.73
CLN6-207ENST00000566347 JARID2Q92833 1246 aaPredicted RBP25.84■■□□□ 1.73
CLN6-207ENST00000566347 PODXL2Q9NZ53 605 aa25.84■■□□□ 1.73
CLN6-207ENST00000566347 G2E3Q7L622 706 aa25.83■■□□□ 1.73
CLN6-207ENST00000566347 TBC1D16Q8TBP0 767 aa25.83■■□□□ 1.73
CLN6-207ENST00000566347 NEURL1BA8MQ27 555 aa25.82■■□□□ 1.72
CLN6-207ENST00000566347 RIMBP2O15034 1052 aa25.82■■□□□ 1.72
CLN6-207ENST00000566347 FLIIQ13045 1269 aa25.82■■□□□ 1.72
CLN6-207ENST00000566347 HSPA1AP0DMV8 641 aaKnown RBP25.81■■□□□ 1.72
CLN6-207ENST00000566347 HSPA1BP0DMV9 641 aaKnown RBP25.81■■□□□ 1.72
CLN6-207ENST00000566347 CTSWP56202 376 aa25.81■■□□□ 1.72
CLN6-207ENST00000566347 ANKRD18AQ8IVF6 992 aa25.81■■□□□ 1.72
CLN6-207ENST00000566347 FAM9BQ8IZU0 186 aa25.81■■□□□ 1.72
CLN6-207ENST00000566347 CCDC85AQ96PX6 553 aaPredicted RBP25.81■■□□□ 1.72
CLN6-207ENST00000566347 DBNDD1Q9H9R9 158 aa25.81■■□□□ 1.72
CLN6-207ENST00000566347 ANKIB1Q9P2G1 1089 aa25.81■■□□□ 1.72
CLN6-207ENST00000566347 MYH3P11055 1940 aa25.8■■□□□ 1.72
CLN6-207ENST00000566347 VAMP4O75379 141 aa25.8■■□□□ 1.72
CLN6-207ENST00000566347 CWF19L2Q2TBE0 894 aaKnown RBP25.8■■□□□ 1.72
CLN6-207ENST00000566347 CDC5LQ99459 802 aaKnown RBP25.8■■□□□ 1.72
CLN6-207ENST00000566347 ZC3H12CQ9C0D7 883 aaKnown RBP25.8■■□□□ 1.72
CLN6-207ENST00000566347 GGA1Q9UJY5 639 aa25.8■■□□□ 1.72
CLN6-207ENST00000566347 ECE2O60344 883 aa25.79■■□□□ 1.72
CLN6-207ENST00000566347 EXOSC9Q06265 439 aaKnown RBP25.79■■□□□ 1.72
CLN6-207ENST00000566347 FKBP5Q13451 457 aaPredicted RBP25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms