RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 CAMTA2O94983 1202 aa10.85□□□□□ -0.67
LSM3P5-201ENST00000566307 CHADLQ6NUI6 762 aa10.85□□□□□ -0.67
LSM3P5-201ENST00000566307 LMBR1LQ6UX01 489 aa10.85□□□□□ -0.67
LSM3P5-201ENST00000566307 SEPT12Q8IYM1 358 aa10.85□□□□□ -0.67
LSM3P5-201ENST00000566307 IL1RAPL2Q9NP60 686 aa10.85□□□□□ -0.67
LSM3P5-201ENST00000566307 ECHDC1Q9NTX5 307 aa10.85□□□□□ -0.67
LSM3P5-201ENST00000566307 PA2G4Q9UQ80 394 aaKnown RBP10.85□□□□□ -0.67
LSM3P5-201ENST00000566307 MYH3P11055 1940 aa10.85□□□□□ -0.67
LSM3P5-201ENST00000566307 SCN7AQ01118 1682 aa10.85□□□□□ -0.67
LSM3P5-201ENST00000566307 LAMB2P55268 1798 aa10.85□□□□□ -0.67
LSM3P5-201ENST00000566307 REC8O95072 547 aa10.84□□□□□ -0.67
LSM3P5-201ENST00000566307 IFIT2P09913 472 aaKnown RBP10.84□□□□□ -0.67
LSM3P5-201ENST00000566307 IL15P40933 162 aaPredicted RBP10.84□□□□□ -0.67
LSM3P5-201ENST00000566307 MFAP1P55081 439 aaKnown RBP10.84□□□□□ -0.67
LSM3P5-201ENST00000566307 HLFQ16534 295 aa10.84□□□□□ -0.67
LSM3P5-201ENST00000566307 BCL11BQ9C0K0 894 aaPredicted RBP10.84□□□□□ -0.67
LSM3P5-201ENST00000566307 ZNF652Q9Y2D9 606 aa10.84□□□□□ -0.67
LSM3P5-201ENST00000566307 RFX7Q2KHR2 1363 aa10.84□□□□□ -0.67
LSM3P5-201ENST00000566307 RTL9Q8NET4 1388 aa10.84□□□□□ -0.67
LSM3P5-201ENST00000566307 TAF1LQ8IZX4 1826 aa10.84□□□□□ -0.67
LSM3P5-201ENST00000566307 LRP5O75197 1615 aa10.84□□□□□ -0.67
LSM3P5-201ENST00000566307 EYA2O00167 538 aa10.83□□□□□ -0.68
LSM3P5-201ENST00000566307 RPS6KA4O75676 772 aa10.83□□□□□ -0.68
LSM3P5-201ENST00000566307 ZNF772Q68DY9 489 aaPredicted RBP10.83□□□□□ -0.68
LSM3P5-201ENST00000566307 CNTROBQ8N137 903 aa10.83□□□□□ -0.68
LSM3P5-201ENST00000566307 EAF2Q96CJ1 260 aaPredicted RBP10.83□□□□□ -0.68
LSM3P5-201ENST00000566307 IL17RAQ96F46 866 aa10.83□□□□□ -0.68
LSM3P5-201ENST00000566307 QTRT2Q9H974 415 aaKnown RBP10.83□□□□□ -0.68
LSM3P5-201ENST00000566307 AK9Q5TCS8 1911 aa10.82□□□□□ -0.68
LSM3P5-201ENST00000566307 A0A0G2JS52 829 aa10.82□□□□□ -0.68
LSM3P5-201ENST00000566307 PDE8AO60658 829 aa10.82□□□□□ -0.68
LSM3P5-201ENST00000566307 CHMLP26374 656 aa10.82□□□□□ -0.68
LSM3P5-201ENST00000566307 MYT1Q01538 1121 aa10.82□□□□□ -0.68
LSM3P5-201ENST00000566307 BECN1Q14457 450 aa10.82□□□□□ -0.68
LSM3P5-201ENST00000566307 TPRNQ4KMQ1 711 aa10.82□□□□□ -0.68
LSM3P5-201ENST00000566307 TNNI3KQ59H18 835 aa10.82□□□□□ -0.68
LSM3P5-201ENST00000566307 FAM196AQ6ZSG2 479 aa10.82□□□□□ -0.68
LSM3P5-201ENST00000566307 ATG9AQ7Z3C6 839 aa10.82□□□□□ -0.68
LSM3P5-201ENST00000566307 AACSQ86V21 672 aa10.82□□□□□ -0.68
LSM3P5-201ENST00000566307 NUTM1Q86Y26 1132 aa10.82□□□□□ -0.68
LSM3P5-201ENST00000566307 LINC00116Q8NCU8 138 aa10.82□□□□□ -0.68
LSM3P5-201ENST00000566307 ZNF330Q9Y3S2 320 aaPredicted RBP10.82□□□□□ -0.68
LSM3P5-201ENST00000566307 FPGT-TNNI3KV9GXZ4 949 aa10.82□□□□□ -0.68
LSM3P5-201ENST00000566307 UBN2Q6ZU65 1347 aa10.82□□□□□ -0.68
LSM3P5-201ENST00000566307 SH3TC1Q8TE82 1336 aa10.82□□□□□ -0.68
LSM3P5-201ENST00000566307 HIP1O00291 1037 aa10.81□□□□□ -0.68
LSM3P5-201ENST00000566307 ATP5JP18859 108 aa10.81□□□□□ -0.68
LSM3P5-201ENST00000566307 CTSWP56202 376 aa10.81□□□□□ -0.68
LSM3P5-201ENST00000566307 RBM6P78332 1123 aaKnown RBP10.81□□□□□ -0.68
LSM3P5-201ENST00000566307 TTLL11Q8NHH1 800 aa10.81□□□□□ -0.68
LSM3P5-201ENST00000566307 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.81□□□□□ -0.68
LSM3P5-201ENST00000566307 SNX21Q969T3 373 aa10.81□□□□□ -0.68
LSM3P5-201ENST00000566307 EVI5LQ96CN4 794 aa10.81□□□□□ -0.68
LSM3P5-201ENST00000566307 USP26Q9BXU7 913 aa10.81□□□□□ -0.68
LSM3P5-201ENST00000566307 TBC1D2BQ9UPU7 963 aa10.81□□□□□ -0.68
LSM3P5-201ENST00000566307 SPEF2Q9C093 1822 aa10.81□□□□□ -0.68
LSM3P5-201ENST00000566307 COL24A1Q17RW2 1714 aa10.81□□□□□ -0.68
LSM3P5-201ENST00000566307 ABCC12Q96J65 1359 aa10.8□□□□□ -0.68
LSM3P5-201ENST00000566307 IRS4O14654 1257 aaPredicted RBP10.8□□□□□ -0.68
LSM3P5-201ENST00000566307 PRR29P0C7W0 189 aa10.8□□□□□ -0.68
LSM3P5-201ENST00000566307 IFIT5Q13325 482 aaKnown RBP10.8□□□□□ -0.68
LSM3P5-201ENST00000566307 CCDC57Q2TAC2 916 aa10.8□□□□□ -0.68
LSM3P5-201ENST00000566307 SLC27A3Q5K4L6 730 aa10.8□□□□□ -0.68
LSM3P5-201ENST00000566307 JARID2Q92833 1246 aaPredicted RBP10.8□□□□□ -0.68
LSM3P5-201ENST00000566307 FAM89AQ96GI7 184 aa10.8□□□□□ -0.68
LSM3P5-201ENST00000566307 ESYT1Q9BSJ8 1104 aa10.8□□□□□ -0.68
LSM3P5-201ENST00000566307 UTP14AQ9BVJ6 771 aaKnown RBP10.8□□□□□ -0.68
LSM3P5-201ENST00000566307 SNRKQ9NRH2 765 aa10.8□□□□□ -0.68
LSM3P5-201ENST00000566307 NARFQ9UHQ1 456 aa10.8□□□□□ -0.68
LSM3P5-201ENST00000566307 TRMT112Q9UI30 125 aaKnown RBP10.8□□□□□ -0.68
LSM3P5-201ENST00000566307 ZNF609O15014 1411 aa10.8□□□□□ -0.68
LSM3P5-201ENST00000566307 C4BP0C0L5 1744 aa10.8□□□□□ -0.68
LSM3P5-201ENST00000566307 BRWD3Q6RI45 1802 aa10.79□□□□□ -0.68
LSM3P5-201ENST00000566307 TRIM6-TRIM34B2RNG4 842 aa10.79□□□□□ -0.68
LSM3P5-201ENST00000566307 NTSR2O95665 410 aa10.79□□□□□ -0.68
LSM3P5-201ENST00000566307 TFCP2Q12800 502 aa10.79□□□□□ -0.68
LSM3P5-201ENST00000566307 KRT27Q7Z3Y8 459 aa10.79□□□□□ -0.68
LSM3P5-201ENST00000566307 KLHDC4Q8TBB5 520 aa10.79□□□□□ -0.68
LSM3P5-201ENST00000566307 SIL1Q9H173 461 aa10.79□□□□□ -0.68
LSM3P5-201ENST00000566307 CCNL1Q9UK58 526 aaPredicted RBP10.79□□□□□ -0.68
LSM3P5-201ENST00000566307 AKAP2Q9Y2D5 859 aa10.79□□□□□ -0.68
LSM3P5-201ENST00000566307 RAD50Q92878 1312 aa10.79□□□□□ -0.68
LSM3P5-201ENST00000566307 DDX60Q8IY21 1712 aaKnown RBP10.78□□□□□ -0.68
LSM3P5-201ENST00000566307 ANKRD18BA2A2Z9 1011 aa10.78□□□□□ -0.68
LSM3P5-201ENST00000566307 GPTP24298 496 aa10.78□□□□□ -0.68
LSM3P5-201ENST00000566307 ANAPC15P60006 121 aa10.78□□□□□ -0.68
LSM3P5-201ENST00000566307 SLC10A5Q5PT55 438 aa10.78□□□□□ -0.68
LSM3P5-201ENST00000566307 SUSD4Q5VX71 490 aa10.78□□□□□ -0.68
LSM3P5-201ENST00000566307 RUFY2Q8WXA3 655 aa10.78□□□□□ -0.68
LSM3P5-201ENST00000566307 KIF2CQ99661 725 aa10.78□□□□□ -0.68
LSM3P5-201ENST00000566307 DBNLQ9UJU6 430 aaKnown RBP10.78□□□□□ -0.68
LSM3P5-201ENST00000566307 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.78□□□□□ -0.68
LSM3P5-201ENST00000566307 RIC1Q4ADV7 1423 aa10.77□□□□□ -0.68
LSM3P5-201ENST00000566307 SGSM2O43147 1006 aa10.77□□□□□ -0.69
LSM3P5-201ENST00000566307 RABEP1Q15276 862 aa10.77□□□□□ -0.69
LSM3P5-201ENST00000566307 TSHZ3Q63HK5 1081 aa10.77□□□□□ -0.69
LSM3P5-201ENST00000566307 PTF1AQ7RTS3 328 aa10.77□□□□□ -0.69
LSM3P5-201ENST00000566307 RILPL2Q969X0 211 aa10.77□□□□□ -0.69
LSM3P5-201ENST00000566307 ZNF512BQ96KM6 892 aaPredicted RBP10.77□□□□□ -0.69
LSM3P5-201ENST00000566307 CEP126Q9P2H0 1117 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms