RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 GRAPLQ8TC17 118 aaPredicted RBP19.65■□□□□ 0.74
COMMD4-212ENST00000565517 PSMD1Q99460 953 aa19.65■□□□□ 0.74
COMMD4-212ENST00000565517 ATP6V0A2Q9Y487 856 aa19.65■□□□□ 0.74
COMMD4-212ENST00000565517 H7C1W4 665 aa19.64■□□□□ 0.73
COMMD4-212ENST00000565517 SP8Q8IXZ3 490 aa19.64■□□□□ 0.73
COMMD4-212ENST00000565517 TMX4Q9H1E5 349 aaPredicted RBP19.64■□□□□ 0.73
COMMD4-212ENST00000565517 HNRNPUQ00839 825 aaKnown RBP eCLIP19.63■□□□□ 0.73
COMMD4-212ENST00000565517 BEND3Q5T5X7 828 aa19.63■□□□□ 0.73
COMMD4-212ENST00000565517 SSH1Q8WYL5 1049 aa19.63■□□□□ 0.73
COMMD4-212ENST00000565517 PTPRCP08575 1304 aa19.62■□□□□ 0.73
COMMD4-212ENST00000565517 F6X3S4 739 aa19.62■□□□□ 0.73
COMMD4-212ENST00000565517 CCDC152Q4G0S7 254 aa19.62■□□□□ 0.73
COMMD4-212ENST00000565517 ZNF526Q8TF50 670 aaPredicted RBP19.62■□□□□ 0.73
COMMD4-212ENST00000565517 JARID2Q92833 1246 aaPredicted RBP19.62■□□□□ 0.73
COMMD4-212ENST00000565517 KDM2BQ8NHM5 1336 aa19.61■□□□□ 0.73
COMMD4-212ENST00000565517 LRRC37AA6NMS7 1700 aa19.61■□□□□ 0.73
COMMD4-212ENST00000565517 CASP7P55210 303 aa19.6■□□□□ 0.73
COMMD4-212ENST00000565517 UBE3BQ7Z3V4 1068 aa19.6■□□□□ 0.73
COMMD4-212ENST00000565517 PLA2G12BQ9BX93 195 aa19.6■□□□□ 0.73
COMMD4-212ENST00000565517 VPS33BQ9H267 617 aa19.6■□□□□ 0.73
COMMD4-212ENST00000565517 GLTPD2A6NH11 291 aa19.59■□□□□ 0.73
COMMD4-212ENST00000565517 ALDH1L1O75891 902 aa19.59■□□□□ 0.73
COMMD4-212ENST00000565517 IARSP41252 1262 aaKnown RBP19.59■□□□□ 0.73
COMMD4-212ENST00000565517 BRPF1P55201 1214 aaPredicted RBP19.59■□□□□ 0.73
COMMD4-212ENST00000565517 CTSWP56202 376 aa19.59■□□□□ 0.73
COMMD4-212ENST00000565517 RPS8P62241 208 aaKnown RBP19.59■□□□□ 0.73
COMMD4-212ENST00000565517 CELF1Q92879 486 aaKnown RBP19.59■□□□□ 0.73
COMMD4-212ENST00000565517 ZNF277Q9NRM2 450 aaPredicted RBP19.59■□□□□ 0.73
COMMD4-212ENST00000565517 DPY19L2Q6NUT2 758 aa19.58■□□□□ 0.72
COMMD4-212ENST00000565517 SUPT20HQ8NEM7 779 aa19.58■□□□□ 0.72
COMMD4-212ENST00000565517 TTLL11Q8NHH1 800 aa19.58■□□□□ 0.72
COMMD4-212ENST00000565517 RTFDC1Q9BY42 306 aaPredicted RBP19.58■□□□□ 0.72
COMMD4-212ENST00000565517 RTL9Q8NET4 1388 aa19.57■□□□□ 0.72
COMMD4-212ENST00000565517 SLC4A10Q6U841 1118 aa19.57■□□□□ 0.72
COMMD4-212ENST00000565517 MPNDQ8N594 471 aa19.57■□□□□ 0.72
COMMD4-212ENST00000565517 SRCIN1Q9C0H9 1055 aa19.57■□□□□ 0.72
COMMD4-212ENST00000565517 SMC4Q9NTJ3 1288 aa19.57■□□□□ 0.72
COMMD4-212ENST00000565517 ZBED9Q6R2W3 1325 aa19.56■□□□□ 0.72
COMMD4-212ENST00000565517 KIF3CO14782 793 aa19.56■□□□□ 0.72
COMMD4-212ENST00000565517 DPP8Q6V1X1 898 aaPredicted RBP19.56■□□□□ 0.72
COMMD4-212ENST00000565517 SLC51AQ86UW1 340 aa19.56■□□□□ 0.72
COMMD4-212ENST00000565517 BCL2L13Q9BXK5 485 aa19.56■□□□□ 0.72
COMMD4-212ENST00000565517 SEC31BQ9NQW1 1179 aa19.56■□□□□ 0.72
COMMD4-212ENST00000565517 COL4A1P02462 1669 aa19.56■□□□□ 0.72
COMMD4-212ENST00000565517 GRM8O00222 908 aa19.55■□□□□ 0.72
COMMD4-212ENST00000565517 CSF1RP07333 972 aa19.55■□□□□ 0.72
COMMD4-212ENST00000565517 FZD9O00144 591 aa19.54■□□□□ 0.72
COMMD4-212ENST00000565517 RARSP54136 660 aaKnown RBP19.54■□□□□ 0.72
COMMD4-212ENST00000565517 JDP2Q8WYK2 163 aa19.54■□□□□ 0.72
COMMD4-212ENST00000565517 CDC5LQ99459 802 aaKnown RBP19.54■□□□□ 0.72
COMMD4-212ENST00000565517 NMRK2Q9NPI5 230 aa19.54■□□□□ 0.72
COMMD4-212ENST00000565517 WDR90Q96KV7 1748 aa19.54■□□□□ 0.72
COMMD4-212ENST00000565517 C1QTNF8P60827 252 aa19.53■□□□□ 0.72
COMMD4-212ENST00000565517 ANKRD18AQ8IVF6 992 aa19.53■□□□□ 0.72
COMMD4-212ENST00000565517 CCDC85AQ96PX6 553 aaPredicted RBP19.53■□□□□ 0.72
COMMD4-212ENST00000565517 GREM2Q9H772 168 aa19.53■□□□□ 0.72
COMMD4-212ENST00000565517 C9orf78Q9NZ63 289 aaPredicted RBP19.53■□□□□ 0.72
COMMD4-212ENST00000565517 LTBP1Q14766 1721 aa19.53■□□□□ 0.72
COMMD4-212ENST00000565517 LARGE2Q8N3Y3 721 aa19.52■□□□□ 0.72
COMMD4-212ENST00000565517 RRAGCQ9HB90 399 aa19.52■□□□□ 0.72
COMMD4-212ENST00000565517 NSFL1CQ9UNZ2 370 aaKnown RBP19.52■□□□□ 0.72
COMMD4-212ENST00000565517 UTYO14607 1347 aa19.51■□□□□ 0.71
COMMD4-212ENST00000565517 PPIP5K2O43314 1243 aa19.51■□□□□ 0.71
COMMD4-212ENST00000565517 VEGFAP15692 232 aaPredicted RBP19.51■□□□□ 0.71
COMMD4-212ENST00000565517 FOXO4P98177 505 aa19.51■□□□□ 0.71
COMMD4-212ENST00000565517 PODXL2Q9NZ53 605 aa19.51■□□□□ 0.71
COMMD4-212ENST00000565517 NOB1Q9ULX3 412 aaKnown RBP19.51■□□□□ 0.71
COMMD4-212ENST00000565517 DUOX1Q9NRD9 1551 aa19.51■□□□□ 0.71
COMMD4-212ENST00000565517 SPEF2Q9C093 1822 aa19.51■□□□□ 0.71
COMMD4-212ENST00000565517 COL4A5P29400 1685 aa19.5■□□□□ 0.71
COMMD4-212ENST00000565517 GPSM2P81274 684 aa19.5■□□□□ 0.71
COMMD4-212ENST00000565517 KIAA2012Q0VF49 1180 aa19.5■□□□□ 0.71
COMMD4-212ENST00000565517 ARHGAP45Q92619 1136 aa19.5■□□□□ 0.71
COMMD4-212ENST00000565517 API5Q9BZZ5 524 aaKnown RBP19.5■□□□□ 0.71
COMMD4-212ENST00000565517 BSDC1Q9NW68 430 aaPredicted RBP19.5■□□□□ 0.71
COMMD4-212ENST00000565517 SCN4AP35499 1836 aa19.5■□□□□ 0.71
COMMD4-212ENST00000565517 KIF16BQ96L93 1317 aa19.5■□□□□ 0.71
COMMD4-212ENST00000565517 TOMM70O94826 608 aa19.49■□□□□ 0.71
COMMD4-212ENST00000565517 DDNO94850 711 aaPredicted RBP19.49■□□□□ 0.71
COMMD4-212ENST00000565517 ITGA6P23229 1130 aa19.49■□□□□ 0.71
COMMD4-212ENST00000565517 AOC3Q16853 763 aa19.49■□□□□ 0.71
COMMD4-212ENST00000565517 NIM1KQ8IY84 436 aa19.49■□□□□ 0.71
COMMD4-212ENST00000565517 POTECB2RU33 542 aa19.48■□□□□ 0.71
COMMD4-212ENST00000565517 EIF6P56537 245 aaKnown RBP19.48■□□□□ 0.71
COMMD4-212ENST00000565517 L3MBTL3Q96JM7 780 aaPredicted RBP19.48■□□□□ 0.71
COMMD4-212ENST00000565517 POLLQ9UGP5 575 aa19.48■□□□□ 0.71
COMMD4-212ENST00000565517 ZNF541Q9H0D2 1346 aa19.48■□□□□ 0.71
COMMD4-212ENST00000565517 NBPF7P0C2Y1 421 aaPredicted RBP19.47■□□□□ 0.71
COMMD4-212ENST00000565517 IGHMBP2P38935 993 aaKnown RBP19.47■□□□□ 0.71
COMMD4-212ENST00000565517 CCT4P50991 539 aaKnown RBP19.47■□□□□ 0.71
COMMD4-212ENST00000565517 WASHC4Q2M389 1173 aa19.47■□□□□ 0.71
COMMD4-212ENST00000565517 FAM161AQ3B820 660 aa19.47■□□□□ 0.71
COMMD4-212ENST00000565517 C16orf71Q8IYS4 520 aaPredicted RBP19.47■□□□□ 0.71
COMMD4-212ENST00000565517 GPC2Q8N158 579 aa19.47■□□□□ 0.71
COMMD4-212ENST00000565517 TBC1D16Q8TBP0 767 aa19.47■□□□□ 0.71
COMMD4-212ENST00000565517 EYA3Q99504 573 aa19.47■□□□□ 0.71
COMMD4-212ENST00000565517 ANKIB1Q9P2G1 1089 aa19.47■□□□□ 0.71
COMMD4-212ENST00000565517 ZNRF3Q9ULT6 936 aa19.47■□□□□ 0.71
COMMD4-212ENST00000565517 ANKRD18BA2A2Z9 1011 aa19.46■□□□□ 0.71
COMMD4-212ENST00000565517 C6orf229H3BNL8 230 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms