RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 TMX4Q9H1E5 349 aaPredicted RBP20.23■□□□□ 0.83
CDH3-204ENST00000565453 LTBP1Q14766 1721 aa20.22■□□□□ 0.83
CDH3-204ENST00000565453 DUOX1Q9NRD9 1551 aa20.22■□□□□ 0.83
CDH3-204ENST00000565453 PPIP5K2O43314 1243 aa20.22■□□□□ 0.83
CDH3-204ENST00000565453 EPHX2P34913 555 aa20.22■□□□□ 0.83
CDH3-204ENST00000565453 AOC3Q16853 763 aa20.22■□□□□ 0.83
CDH3-204ENST00000565453 CHMP4AQ9BY43 222 aa20.22■□□□□ 0.83
CDH3-204ENST00000565453 IRS4O14654 1257 aaPredicted RBP20.21■□□□□ 0.83
CDH3-204ENST00000565453 RTL5Q5HYW3 569 aaPredicted RBP20.21■□□□□ 0.83
CDH3-204ENST00000565453 TMC4Q7Z404 712 aa20.21■□□□□ 0.83
CDH3-204ENST00000565453 NIM1KQ8IY84 436 aa20.21■□□□□ 0.83
CDH3-204ENST00000565453 MPNDQ8N594 471 aa20.21■□□□□ 0.83
CDH3-204ENST00000565453 ZBTB38Q8NAP3 1195 aaPredicted RBP20.21■□□□□ 0.83
CDH3-204ENST00000565453 SUPT20HQ8NEM7 779 aa20.21■□□□□ 0.83
CDH3-204ENST00000565453 MYD88Q99836 296 aa20.21■□□□□ 0.83
CDH3-204ENST00000565453 DPP8Q6V1X1 898 aaPredicted RBP20.2■□□□□ 0.82
CDH3-204ENST00000565453 CCDC191Q8NCU4 936 aa20.2■□□□□ 0.82
CDH3-204ENST00000565453 CELF1Q92879 486 aaKnown RBP20.2■□□□□ 0.82
CDH3-204ENST00000565453 METTL22Q9BUU2 404 aaPredicted RBP20.2■□□□□ 0.82
CDH3-204ENST00000565453 PASKQ96RG2 1323 aa20.2■□□□□ 0.82
CDH3-204ENST00000565453 TWISTNBQ3B726 338 aaPredicted RBP20.19■□□□□ 0.82
CDH3-204ENST00000565453 EAPPQ56P03 285 aaPredicted RBP20.19■□□□□ 0.82
CDH3-204ENST00000565453 GJA3Q9Y6H8 435 aa20.19■□□□□ 0.82
CDH3-204ENST00000565453 DDX58O95786 925 aaKnown RBP20.18■□□□□ 0.82
CDH3-204ENST00000565453 ITGBL1O95965 494 aaPredicted RBP20.18■□□□□ 0.82
CDH3-204ENST00000565453 PCCAP05165 728 aaPredicted RBP20.18■□□□□ 0.82
CDH3-204ENST00000565453 SCNN1DP51172 638 aa20.18■□□□□ 0.82
CDH3-204ENST00000565453 KIAA2012Q0VF49 1180 aa20.18■□□□□ 0.82
CDH3-204ENST00000565453 KSR2Q6VAB6 950 aa20.17■□□□□ 0.82
CDH3-204ENST00000565453 PNMA8AQ86V59 439 aaPredicted RBP20.17■□□□□ 0.82
CDH3-204ENST00000565453 CWC25Q9NXE8 425 aaPredicted RBP20.17■□□□□ 0.82
CDH3-204ENST00000565453 ZNRF3Q9ULT6 936 aa20.17■□□□□ 0.82
CDH3-204ENST00000565453 MAP3K2Q9Y2U5 619 aa20.17■□□□□ 0.82
CDH3-204ENST00000565453 FANCIQ9NVI1 1328 aa20.17■□□□□ 0.82
CDH3-204ENST00000565453 G2E3Q7L622 706 aa20.16■□□□□ 0.82
CDH3-204ENST00000565453 WDR63Q8IWG1 891 aa20.16■□□□□ 0.82
CDH3-204ENST00000565453 CREBZFQ9NS37 354 aa20.16■□□□□ 0.82
CDH3-204ENST00000565453 PI4KAP2A4QPH2 592 aa20.15■□□□□ 0.82
CDH3-204ENST00000565453 IGKV5-2P06315 115 aa20.15■□□□□ 0.82
CDH3-204ENST00000565453 EPS15P42566 896 aa20.15■□□□□ 0.82
CDH3-204ENST00000565453 CXCL9Q07325 125 aa20.15■□□□□ 0.82
CDH3-204ENST00000565453 PI4KAP1Q8N8J0 262 aa20.15■□□□□ 0.82
CDH3-204ENST00000565453 JARID2Q92833 1246 aaPredicted RBP20.15■□□□□ 0.82
CDH3-204ENST00000565453 STK31Q9BXU1 1019 aa20.15■□□□□ 0.82
CDH3-204ENST00000565453 LMOD1P29536 600 aaPredicted RBP20.14■□□□□ 0.81
CDH3-204ENST00000565453 SEC31BQ9NQW1 1179 aa20.14■□□□□ 0.81
CDH3-204ENST00000565453 CLEC11AQ9Y240 323 aa20.14■□□□□ 0.81
CDH3-204ENST00000565453 SALL2Q9Y467 1007 aaPredicted RBP20.14■□□□□ 0.81
CDH3-204ENST00000565453 CDHR2Q9BYE9 1310 aa20.13■□□□□ 0.81
CDH3-204ENST00000565453 PDE8AO60658 829 aa20.13■□□□□ 0.81
CDH3-204ENST00000565453 SLC4A2P04920 1241 aa20.13■□□□□ 0.81
CDH3-204ENST00000565453 HSP90B1P14625 803 aaKnown RBP20.13■□□□□ 0.81
CDH3-204ENST00000565453 RPS8P62241 208 aaKnown RBP20.13■□□□□ 0.81
CDH3-204ENST00000565453 GPSM2P81274 684 aa20.13■□□□□ 0.81
CDH3-204ENST00000565453 YDJCA8MPS7 323 aa20.12■□□□□ 0.81
CDH3-204ENST00000565453 MAP1SQ66K74 1059 aaPredicted RBP20.12■□□□□ 0.81
CDH3-204ENST00000565453 CNTROBQ8N137 903 aa20.12■□□□□ 0.81
CDH3-204ENST00000565453 SPINK5Q9NQ38 1064 aaPredicted RBP20.12■□□□□ 0.81
CDH3-204ENST00000565453 GPRC5DQ9NZD1 345 aa20.12■□□□□ 0.81
CDH3-204ENST00000565453 POLLQ9UGP5 575 aa20.12■□□□□ 0.81
CDH3-204ENST00000565453 NSFL1CQ9UNZ2 370 aaKnown RBP20.12■□□□□ 0.81
CDH3-204ENST00000565453 VAMP4O75379 141 aa20.11■□□□□ 0.81
CDH3-204ENST00000565453 CCDC152Q4G0S7 254 aa20.11■□□□□ 0.81
CDH3-204ENST00000565453 CIAPIN1Q6FI81 312 aa20.11■□□□□ 0.81
CDH3-204ENST00000565453 USP50Q70EL3 339 aaPredicted RBP20.1■□□□□ 0.81
CDH3-204ENST00000565453 NEURL1BA8MQ27 555 aa20.09■□□□□ 0.81
CDH3-204ENST00000565453 RAD17O75943 681 aa20.09■□□□□ 0.81
CDH3-204ENST00000565453 GMPSP49915 693 aaPredicted RBP20.09■□□□□ 0.81
CDH3-204ENST00000565453 EXOSC9Q06265 439 aaKnown RBP20.09■□□□□ 0.81
CDH3-204ENST00000565453 FLIIQ13045 1269 aa20.09■□□□□ 0.81
CDH3-204ENST00000565453 WASHC4Q2M389 1173 aa20.09■□□□□ 0.81
CDH3-204ENST00000565453 CWF19L2Q2TBE0 894 aaKnown RBP20.09■□□□□ 0.81
CDH3-204ENST00000565453 FAM9BQ8IZU0 186 aa20.09■□□□□ 0.81
CDH3-204ENST00000565453 TBC1D16Q8TBP0 767 aa20.09■□□□□ 0.81
CDH3-204ENST00000565453 PODXL2Q9NZ53 605 aa20.09■□□□□ 0.81
CDH3-204ENST00000565453 TMEM88BA6NKF7 163 aa20.08■□□□□ 0.81
CDH3-204ENST00000565453 CTSWP56202 376 aa20.08■□□□□ 0.81
CDH3-204ENST00000565453 NEXNQ0ZGT2 675 aa20.08■□□□□ 0.81
CDH3-204ENST00000565453 TNIP1Q15025 636 aa20.08■□□□□ 0.81
CDH3-204ENST00000565453 CCDC85AQ96PX6 553 aaPredicted RBP20.08■□□□□ 0.81
CDH3-204ENST00000565453 ADARB2Q9NS39 739 aaKnown RBP20.08■□□□□ 0.81
CDH3-204ENST00000565453 MKRN1Q9UHC7 482 aaKnown RBP20.08■□□□□ 0.81
CDH3-204ENST00000565453 CNTNAP1P78357 1384 aa20.08■□□□□ 0.8
CDH3-204ENST00000565453 C6orf229H3BNL8 230 aa20.07■□□□□ 0.8
CDH3-204ENST00000565453 H7C1W4 665 aa20.07■□□□□ 0.8
CDH3-204ENST00000565453 GPR101Q96P66 508 aaPredicted RBP20.07■□□□□ 0.8
CDH3-204ENST00000565453 DBNDD1Q9H9R9 158 aa20.07■□□□□ 0.8
CDH3-204ENST00000565453 CACNA1FO60840 1977 aa20.06■□□□□ 0.8
CDH3-204ENST00000565453 RIMBP2O15034 1052 aa20.06■□□□□ 0.8
CDH3-204ENST00000565453 TTLL11Q8NHH1 800 aa20.06■□□□□ 0.8
CDH3-204ENST00000565453 EYA3Q99504 573 aa20.06■□□□□ 0.8
CDH3-204ENST00000565453 IFFO2Q5TF58 517 aa20.05■□□□□ 0.8
CDH3-204ENST00000565453 DNAAF4Q8WXU2 420 aa20.05■□□□□ 0.8
CDH3-204ENST00000565453 RTL9Q8NET4 1388 aa20.05■□□□□ 0.8
CDH3-204ENST00000565453 ZNF521Q96K83 1311 aa20.04■□□□□ 0.8
CDH3-204ENST00000565453 MYH3P11055 1940 aa20.04■□□□□ 0.8
CDH3-204ENST00000565453 PSMD14O00487 310 aa20.04■□□□□ 0.8
CDH3-204ENST00000565453 ECE2O60344 883 aa20.04■□□□□ 0.8
CDH3-204ENST00000565453 CASP7P55210 303 aa20.04■□□□□ 0.8
CDH3-204ENST00000565453 FMR1Q06787 632 aaKnown RBP eCLIP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms