RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 TMC4Q7Z404 712 aa8.26□□□□□ -1.09
TCF4-228ENST00000565393 WWC1Q8IX03 1113 aa8.26□□□□□ -1.09
TCF4-228ENST00000565393 ZBTB38Q8NAP3 1195 aaPredicted RBP8.26□□□□□ -1.09
TCF4-228ENST00000565393 BCL2L13Q9BXK5 485 aa8.26□□□□□ -1.09
TCF4-228ENST00000565393 STK31Q9BXU1 1019 aa8.26□□□□□ -1.09
TCF4-228ENST00000565393 VIRMAQ69YN4 1812 aaKnown RBP8.26□□□□□ -1.09
TCF4-228ENST00000565393 SLX4Q8IY92 1834 aa8.26□□□□□ -1.09
TCF4-228ENST00000565393 SLC4A2P04920 1241 aa8.25□□□□□ -1.09
TCF4-228ENST00000565393 CXCL9Q07325 125 aa8.25□□□□□ -1.09
TCF4-228ENST00000565393 CIAPIN1Q6FI81 312 aa8.25□□□□□ -1.09
TCF4-228ENST00000565393 USP50Q70EL3 339 aaPredicted RBP8.25□□□□□ -1.09
TCF4-228ENST00000565393 TSPYL6Q8N831 410 aa8.25□□□□□ -1.09
TCF4-228ENST00000565393 CCDC191Q8NCU4 936 aa8.25□□□□□ -1.09
TCF4-228ENST00000565393 CELF1Q92879 486 aaKnown RBP8.25□□□□□ -1.09
TCF4-228ENST00000565393 TSR2Q969E8 191 aaKnown RBP8.25□□□□□ -1.09
TCF4-228ENST00000565393 CCDC85AQ96PX6 553 aaPredicted RBP8.25□□□□□ -1.09
TCF4-228ENST00000565393 METTL22Q9BUU2 404 aaPredicted RBP8.25□□□□□ -1.09
TCF4-228ENST00000565393 RTFDC1Q9BY42 306 aaPredicted RBP8.25□□□□□ -1.09
TCF4-228ENST00000565393 MAP3K2Q9Y2U5 619 aa8.25□□□□□ -1.09
TCF4-228ENST00000565393 ANKRD31Q8N7Z5 1873 aa8.25□□□□□ -1.09
TCF4-228ENST00000565393 RIC1Q4ADV7 1423 aa8.24□□□□□ -1.09
TCF4-228ENST00000565393 GPSM2P81274 684 aa8.24□□□□□ -1.09
TCF4-228ENST00000565393 KIAA2012Q0VF49 1180 aa8.24□□□□□ -1.09
TCF4-228ENST00000565393 NEXNQ0ZGT2 675 aa8.24□□□□□ -1.09
TCF4-228ENST00000565393 DOK7Q18PE1 504 aa8.24□□□□□ -1.09
TCF4-228ENST00000565393 CCDC27Q2M243 656 aa8.24□□□□□ -1.09
TCF4-228ENST00000565393 DEFB115Q30KQ5 88 aa8.24□□□□□ -1.09
TCF4-228ENST00000565393 TWISTNBQ3B726 338 aaPredicted RBP8.24□□□□□ -1.09
TCF4-228ENST00000565393 COL13A1Q5TAT6 717 aaPredicted RBP8.24□□□□□ -1.09
TCF4-228ENST00000565393 KSR2Q6VAB6 950 aa8.24□□□□□ -1.09
TCF4-228ENST00000565393 FAM9BQ8IZU0 186 aa8.24□□□□□ -1.09
TCF4-228ENST00000565393 EYA3Q99504 573 aa8.24□□□□□ -1.09
TCF4-228ENST00000565393 ZC3H12CQ9C0D7 883 aaKnown RBP8.24□□□□□ -1.09
TCF4-228ENST00000565393 SEC31BQ9NQW1 1179 aa8.24□□□□□ -1.09
TCF4-228ENST00000565393 CWC25Q9NXE8 425 aaPredicted RBP8.24□□□□□ -1.09
TCF4-228ENST00000565393 GPRC5DQ9NZD1 345 aa8.24□□□□□ -1.09
TCF4-228ENST00000565393 ANKIB1Q9P2G1 1089 aa8.24□□□□□ -1.09
TCF4-228ENST00000565393 ABT1Q9ULW3 272 aaKnown RBP8.24□□□□□ -1.09
TCF4-228ENST00000565393 BCORQ6W2J9 1755 aa8.23□□□□□ -1.09
TCF4-228ENST00000565393 KDM3BQ7LBC6 1761 aa8.23□□□□□ -1.09
TCF4-228ENST00000565393 PI4KAP2A4QPH2 592 aa8.23□□□□□ -1.09
TCF4-228ENST00000565393 H7C1D1 291 aa8.23□□□□□ -1.09
TCF4-228ENST00000565393 PDE8AO60658 829 aa8.23□□□□□ -1.09
TCF4-228ENST00000565393 PCCAP05165 728 aaPredicted RBP8.23□□□□□ -1.09
TCF4-228ENST00000565393 HSPA1AP0DMV8 641 aaKnown RBP8.23□□□□□ -1.09
TCF4-228ENST00000565393 HSPA1BP0DMV9 641 aaKnown RBP8.23□□□□□ -1.09
TCF4-228ENST00000565393 GMPSP49915 693 aaPredicted RBP8.23□□□□□ -1.09
TCF4-228ENST00000565393 SCNN1DP51172 638 aa8.23□□□□□ -1.09
TCF4-228ENST00000565393 CCDC152Q4G0S7 254 aa8.23□□□□□ -1.09
TCF4-228ENST00000565393 RBM26Q5T8P6 1007 aaKnown RBP8.23□□□□□ -1.09
TCF4-228ENST00000565393 PAXIP1Q6ZW49 1069 aaPredicted RBP8.23□□□□□ -1.09
TCF4-228ENST00000565393 PI4KAP1Q8N8J0 262 aa8.23□□□□□ -1.09
TCF4-228ENST00000565393 DBNDD1Q9H9R9 158 aa8.23□□□□□ -1.09
TCF4-228ENST00000565393 ADARB2Q9NS39 739 aaKnown RBP8.23□□□□□ -1.09
TCF4-228ENST00000565393 CNOT7Q9UIV1 285 aaKnown RBP8.23□□□□□ -1.09
TCF4-228ENST00000565393 PASKQ96RG2 1323 aa8.23□□□□□ -1.09
TCF4-228ENST00000565393 COL11A2P13942 1736 aaPredicted RBP8.23□□□□□ -1.09
TCF4-228ENST00000565393 DLEC1Q9Y238 1755 aa8.22□□□□□ -1.09
TCF4-228ENST00000565393 SBF1O95248 1867 aa8.22□□□□□ -1.09
TCF4-228ENST00000565393 VEGFBP49765 207 aa8.22□□□□□ -1.09
TCF4-228ENST00000565393 FMR1Q06787 632 aaKnown RBP eCLIP8.22□□□□□ -1.09
TCF4-228ENST00000565393 GRM1Q13255 1194 aa8.22□□□□□ -1.09
TCF4-228ENST00000565393 ANKRD18AQ8IVF6 992 aa8.22□□□□□ -1.09
TCF4-228ENST00000565393 AIDAQ96BJ3 306 aa8.22□□□□□ -1.09
TCF4-228ENST00000565393 POLLQ9UGP5 575 aa8.22□□□□□ -1.09
TCF4-228ENST00000565393 ZBTB12Q9Y330 459 aaPredicted RBP8.22□□□□□ -1.09
TCF4-228ENST00000565393 TNRC6CQ9HCJ0 1690 aaKnown RBP8.21□□□□□ -1.09
TCF4-228ENST00000565393 DLG5Q8TDM6 1919 aa8.21□□□□□ -1.09
TCF4-228ENST00000565393 WDR90Q96KV7 1748 aa8.21□□□□□ -1.09
TCF4-228ENST00000565393 TRAF5O00463 557 aa8.21□□□□□ -1.1
TCF4-228ENST00000565393 CWF19L2Q2TBE0 894 aaKnown RBP8.21□□□□□ -1.1
TCF4-228ENST00000565393 G2E3Q7L622 706 aa8.21□□□□□ -1.1
TCF4-228ENST00000565393 WDR63Q8IWG1 891 aa8.21□□□□□ -1.1
TCF4-228ENST00000565393 TNS4Q8IZW8 715 aa8.21□□□□□ -1.1
TCF4-228ENST00000565393 TBC1D16Q8TBP0 767 aa8.21□□□□□ -1.1
TCF4-228ENST00000565393 GPR101Q96P66 508 aaPredicted RBP8.21□□□□□ -1.1
TCF4-228ENST00000565393 ZNF408Q9H9D4 720 aa8.21□□□□□ -1.1
TCF4-228ENST00000565393 KCNQ5Q9NR82 932 aa8.21□□□□□ -1.1
TCF4-228ENST00000565393 GGA1Q9UJY5 639 aa8.21□□□□□ -1.1
TCF4-228ENST00000565393 IL16Q14005 1332 aa8.21□□□□□ -1.1
TCF4-228ENST00000565393 SNED1Q8TER0 1413 aa8.2□□□□□ -1.1
TCF4-228ENST00000565393 FER1L6Q2WGJ9 1857 aa8.2□□□□□ -1.1
TCF4-228ENST00000565393 YDJCA8MPS7 323 aa8.2□□□□□ -1.1
TCF4-228ENST00000565393 PSMD14O00487 310 aa8.2□□□□□ -1.1
TCF4-228ENST00000565393 ECE2O60344 883 aa8.2□□□□□ -1.1
TCF4-228ENST00000565393 VAMP4O75379 141 aa8.2□□□□□ -1.1
TCF4-228ENST00000565393 CAPN15O75808 1086 aa8.2□□□□□ -1.1
TCF4-228ENST00000565393 UFL1O94874 794 aa8.2□□□□□ -1.1
TCF4-228ENST00000565393 IGKV5-2P06315 115 aa8.2□□□□□ -1.1
TCF4-228ENST00000565393 HIRAP54198 1017 aaPredicted RBP8.2□□□□□ -1.1
TCF4-228ENST00000565393 EXOSC9Q06265 439 aaKnown RBP8.2□□□□□ -1.1
TCF4-228ENST00000565393 FKBP5Q13451 457 aaPredicted RBP8.2□□□□□ -1.1
TCF4-228ENST00000565393 NCBP3Q53F19 620 aaKnown RBP8.2□□□□□ -1.1
TCF4-228ENST00000565393 CST9Q5W186 159 aa8.2□□□□□ -1.1
TCF4-228ENST00000565393 CDC37L1Q7L3B6 337 aa8.2□□□□□ -1.1
TCF4-228ENST00000565393 USP48Q86UV5 1035 aa8.2□□□□□ -1.1
TCF4-228ENST00000565393 MICALL2Q8IY33 904 aa8.2□□□□□ -1.1
TCF4-228ENST00000565393 DPF2Q92785 391 aa8.2□□□□□ -1.1
TCF4-228ENST00000565393 CDC5LQ99459 802 aaKnown RBP8.2□□□□□ -1.1
TCF4-228ENST00000565393 LAMB4A4D0S4 1761 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms