RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 ATP5J2-PTCD1G3V325 749 aa11.18□□□□□ -0.62
CAPN3-213ENST00000565173 APAF1O14727 1248 aa11.18□□□□□ -0.62
CAPN3-213ENST00000565173 FOXN1O15353 648 aa11.18□□□□□ -0.62
CAPN3-213ENST00000565173 LMOD1P29536 600 aaPredicted RBP11.18□□□□□ -0.62
CAPN3-213ENST00000565173 KIAA2012Q0VF49 1180 aa11.18□□□□□ -0.62
CAPN3-213ENST00000565173 TRIM28Q13263 835 aaKnown RBP11.18□□□□□ -0.62
CAPN3-213ENST00000565173 GRAPQ13588 217 aa11.18□□□□□ -0.62
CAPN3-213ENST00000565173 SF3B3Q15393 1217 aaKnown RBP11.18□□□□□ -0.62
CAPN3-213ENST00000565173 DPP8Q6V1X1 898 aaPredicted RBP11.18□□□□□ -0.62
CAPN3-213ENST00000565173 MPNDQ8N594 471 aa11.18□□□□□ -0.62
CAPN3-213ENST00000565173 SUPT20HQ8NEM7 779 aa11.18□□□□□ -0.62
CAPN3-213ENST00000565173 GRAPLQ8TC17 118 aaPredicted RBP11.18□□□□□ -0.62
CAPN3-213ENST00000565173 FAM89AQ96GI7 184 aa11.18□□□□□ -0.62
CAPN3-213ENST00000565173 TMX4Q9H1E5 349 aaPredicted RBP11.18□□□□□ -0.62
CAPN3-213ENST00000565173 HYPKQ9NX55 129 aa11.18□□□□□ -0.62
CAPN3-213ENST00000565173 TAF1P21675 1872 aa11.18□□□□□ -0.62
CAPN3-213ENST00000565173 YDJCA8MPS7 323 aa11.17□□□□□ -0.62
CAPN3-213ENST00000565173 DEFB115Q30KQ5 88 aa11.17□□□□□ -0.62
CAPN3-213ENST00000565173 CST9Q5W186 159 aa11.17□□□□□ -0.62
CAPN3-213ENST00000565173 ADARB2Q9NS39 739 aaKnown RBP11.17□□□□□ -0.62
CAPN3-213ENST00000565173 PGAP2Q9UHJ9 254 aa11.17□□□□□ -0.62
CAPN3-213ENST00000565173 DDX60Q8IY21 1712 aaKnown RBP11.17□□□□□ -0.62
CAPN3-213ENST00000565173 DUOX1Q9NRD9 1551 aa11.16□□□□□ -0.62
CAPN3-213ENST00000565173 TRAF5O00463 557 aa11.16□□□□□ -0.62
CAPN3-213ENST00000565173 GMPSP49915 693 aaPredicted RBP11.16□□□□□ -0.62
CAPN3-213ENST00000565173 TMC4Q7Z404 712 aa11.16□□□□□ -0.62
CAPN3-213ENST00000565173 CELF1Q92879 486 aaKnown RBP11.16□□□□□ -0.62
CAPN3-213ENST00000565173 WBP1LQ9NX94 342 aa11.16□□□□□ -0.62
CAPN3-213ENST00000565173 COL4A1P02462 1669 aa11.16□□□□□ -0.62
CAPN3-213ENST00000565173 WDR33Q9C0J8 1336 aaKnown RBP11.15□□□□□ -0.62
CAPN3-213ENST00000565173 RAD17O75943 681 aa11.15□□□□□ -0.62
CAPN3-213ENST00000565173 HIRAP54198 1017 aaPredicted RBP11.15□□□□□ -0.62
CAPN3-213ENST00000565173 CIAPIN1Q6FI81 312 aa11.15□□□□□ -0.62
CAPN3-213ENST00000565173 C8orf58Q8NAV2 365 aa11.15□□□□□ -0.62
CAPN3-213ENST00000565173 PHAXQ9H814 394 aaKnown RBP11.15□□□□□ -0.62
CAPN3-213ENST00000565173 PRDM10Q9NQV6 1147 aa11.15□□□□□ -0.62
CAPN3-213ENST00000565173 IFT57Q9NWB7 429 aa11.15□□□□□ -0.62
CAPN3-213ENST00000565173 LRRC37AA6NMS7 1700 aa11.15□□□□□ -0.63
CAPN3-213ENST00000565173 ELL2O00472 640 aaPredicted RBP11.14□□□□□ -0.63
CAPN3-213ENST00000565173 IRS4O14654 1257 aaPredicted RBP11.14□□□□□ -0.63
CAPN3-213ENST00000565173 CAPN15O75808 1086 aa11.14□□□□□ -0.63
CAPN3-213ENST00000565173 GNAI1P63096 354 aa11.14□□□□□ -0.63
CAPN3-213ENST00000565173 RTL5Q5HYW3 569 aaPredicted RBP11.14□□□□□ -0.63
CAPN3-213ENST00000565173 POLLQ9UGP5 575 aa11.14□□□□□ -0.63
CAPN3-213ENST00000565173 SHTN1A0MZ66 631 aa11.13□□□□□ -0.63
CAPN3-213ENST00000565173 CTCFP49711 727 aaPredicted RBP11.13□□□□□ -0.63
CAPN3-213ENST00000565173 GPSM2P81274 684 aa11.13□□□□□ -0.63
CAPN3-213ENST00000565173 TNIP1Q15025 636 aa11.13□□□□□ -0.63
CAPN3-213ENST00000565173 RIC3Q7Z5B4 369 aa11.13□□□□□ -0.63
CAPN3-213ENST00000565173 ZBTB38Q8NAP3 1195 aaPredicted RBP11.13□□□□□ -0.63
CAPN3-213ENST00000565173 CNOT7Q9UIV1 285 aaKnown RBP11.13□□□□□ -0.63
CAPN3-213ENST00000565173 ABT1Q9ULW3 272 aaKnown RBP11.13□□□□□ -0.63
CAPN3-213ENST00000565173 NSFL1CQ9UNZ2 370 aaKnown RBP11.13□□□□□ -0.63
CAPN3-213ENST00000565173 CDHR2Q9BYE9 1310 aa11.12□□□□□ -0.63
CAPN3-213ENST00000565173 RPS8P62241 208 aaKnown RBP11.12□□□□□ -0.63
CAPN3-213ENST00000565173 CALD1Q05682 793 aaKnown RBP11.12□□□□□ -0.63
CAPN3-213ENST00000565173 WASHC4Q2M389 1173 aa11.12□□□□□ -0.63
CAPN3-213ENST00000565173 CCDC184Q52MB2 194 aa11.12□□□□□ -0.63
CAPN3-213ENST00000565173 TSPYL6Q8N831 410 aa11.12□□□□□ -0.63
CAPN3-213ENST00000565173 TRPM4Q8TD43 1214 aa11.12□□□□□ -0.63
CAPN3-213ENST00000565173 ZC3H15Q8WU90 426 aaKnown RBP11.12□□□□□ -0.63
CAPN3-213ENST00000565173 BCL2L13Q9BXK5 485 aa11.12□□□□□ -0.63
CAPN3-213ENST00000565173 GLIS2Q9BZE0 524 aaPredicted RBP11.12□□□□□ -0.63
CAPN3-213ENST00000565173 SEC31BQ9NQW1 1179 aa11.12□□□□□ -0.63
CAPN3-213ENST00000565173 KCNQ5Q9NR82 932 aa11.12□□□□□ -0.63
CAPN3-213ENST00000565173 ZBTB12Q9Y330 459 aaPredicted RBP11.12□□□□□ -0.63
CAPN3-213ENST00000565173 TLL2Q9Y6L7 1015 aa11.12□□□□□ -0.63
CAPN3-213ENST00000565173 TRPM7Q96QT4 1865 aa11.11□□□□□ -0.63
CAPN3-213ENST00000565173 PSMD14O00487 310 aa11.11□□□□□ -0.63
CAPN3-213ENST00000565173 RIMBP2O15034 1052 aa11.11□□□□□ -0.63
CAPN3-213ENST00000565173 LBX1P52954 281 aa11.11□□□□□ -0.63
CAPN3-213ENST00000565173 MAP2K1Q02750 393 aaPredicted RBP11.11□□□□□ -0.63
CAPN3-213ENST00000565173 GOLGA2Q08379 1002 aa11.11□□□□□ -0.63
CAPN3-213ENST00000565173 CYP4F22Q6NT55 531 aa11.11□□□□□ -0.63
CAPN3-213ENST00000565173 SAPCD2Q86UD0 394 aa11.11□□□□□ -0.63
CAPN3-213ENST00000565173 CCDC191Q8NCU4 936 aa11.11□□□□□ -0.63
CAPN3-213ENST00000565173 TBC1D16Q8TBP0 767 aa11.11□□□□□ -0.63
CAPN3-213ENST00000565173 DPF2Q92785 391 aa11.11□□□□□ -0.63
CAPN3-213ENST00000565173 AIDAQ96BJ3 306 aa11.11□□□□□ -0.63
CAPN3-213ENST00000565173 CAPNS2Q96L46 248 aa11.11□□□□□ -0.63
CAPN3-213ENST00000565173 GPR101Q96P66 508 aaPredicted RBP11.11□□□□□ -0.63
CAPN3-213ENST00000565173 MYD88Q99836 296 aa11.11□□□□□ -0.63
CAPN3-213ENST00000565173 DBNDD1Q9H9R9 158 aa11.11□□□□□ -0.63
CAPN3-213ENST00000565173 PODXL2Q9NZ53 605 aa11.11□□□□□ -0.63
CAPN3-213ENST00000565173 THSD7BQ9C0I4 1608 aa11.1□□□□□ -0.63
CAPN3-213ENST00000565173 C6orf229H3BNL8 230 aa11.1□□□□□ -0.63
CAPN3-213ENST00000565173 H7C1D1 291 aa11.1□□□□□ -0.63
CAPN3-213ENST00000565173 EGFRP00533 1210 aa11.1□□□□□ -0.63
CAPN3-213ENST00000565173 PCCAP05165 728 aaPredicted RBP11.1□□□□□ -0.63
CAPN3-213ENST00000565173 HSPA8P11142 646 aaKnown RBP11.1□□□□□ -0.63
CAPN3-213ENST00000565173 DOK7Q18PE1 504 aa11.1□□□□□ -0.63
CAPN3-213ENST00000565173 MICALL2Q8IY33 904 aa11.1□□□□□ -0.63
CAPN3-213ENST00000565173 JARID2Q92833 1246 aaPredicted RBP11.1□□□□□ -0.63
CAPN3-213ENST00000565173 METTL22Q9BUU2 404 aaPredicted RBP11.1□□□□□ -0.63
CAPN3-213ENST00000565173 RTL9Q8NET4 1388 aa11.1□□□□□ -0.63
CAPN3-213ENST00000565173 CELF2O95319 508 aaKnown RBP11.09□□□□□ -0.63
CAPN3-213ENST00000565173 ECE1P42892 770 aa11.09□□□□□ -0.63
CAPN3-213ENST00000565173 CCDC30Q5VVM6 783 aa11.09□□□□□ -0.63
CAPN3-213ENST00000565173 DLK2Q6UY11 383 aa11.09□□□□□ -0.63
CAPN3-213ENST00000565173 CDC37L1Q7L3B6 337 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms