RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 STK17AQ9UEE5 414 aa7.88□□□□□ -1.15
PALB2-203ENST00000565038 POLIQ9UNA4 740 aa7.88□□□□□ -1.15
PALB2-203ENST00000565038 ADAMTS8Q9UP79 889 aa7.88□□□□□ -1.15
PALB2-203ENST00000565038 IVNS1ABPQ9Y6Y0 642 aa7.88□□□□□ -1.15
PALB2-203ENST00000565038 A6NHS1 94 aa7.87□□□□□ -1.15
PALB2-203ENST00000565038 FZD6O60353 706 aa7.87□□□□□ -1.15
PALB2-203ENST00000565038 ADH7P40394 386 aa7.87□□□□□ -1.15
PALB2-203ENST00000565038 BTBD6Q96KE9 485 aa7.87□□□□□ -1.15
PALB2-203ENST00000565038 GGNBP2Q9H3C7 697 aa7.87□□□□□ -1.15
PALB2-203ENST00000565038 ENAMQ9NRM1 1142 aa7.87□□□□□ -1.15
PALB2-203ENST00000565038 LRRC4BQ9NT99 713 aa7.87□□□□□ -1.15
PALB2-203ENST00000565038 ELOA3CA0A087WX78 387 aaPredicted RBP7.86□□□□□ -1.15
PALB2-203ENST00000565038 SOWAHDA6NJG2 315 aa7.86□□□□□ -1.15
PALB2-203ENST00000565038 ELOA3DA6NLF2 546 aaPredicted RBP7.86□□□□□ -1.15
PALB2-203ENST00000565038 MZF1P28698 734 aaPredicted RBP7.86□□□□□ -1.15
PALB2-203ENST00000565038 KCNA1Q09470 495 aa7.86□□□□□ -1.15
PALB2-203ENST00000565038 ELOA3BQ3SY89 546 aa7.86□□□□□ -1.15
PALB2-203ENST00000565038 C8orf34Q49A92 452 aa7.86□□□□□ -1.15
PALB2-203ENST00000565038 NLRP13Q86W25 1043 aa7.86□□□□□ -1.15
PALB2-203ENST00000565038 ELOA3Q8NG57 546 aa7.86□□□□□ -1.15
PALB2-203ENST00000565038 TNFRSF25Q93038 417 aa7.86□□□□□ -1.15
PALB2-203ENST00000565038 EFCC1Q9HA90 598 aa7.86□□□□□ -1.15
PALB2-203ENST00000565038 RRAGCQ9HB90 399 aa7.86□□□□□ -1.15
PALB2-203ENST00000565038 DNAJB12Q9NXW2 375 aaKnown RBP7.86□□□□□ -1.15
PALB2-203ENST00000565038 FNDC3AQ9Y2H6 1198 aaKnown RBP7.86□□□□□ -1.15
PALB2-203ENST00000565038 FAM181BA6NEQ2 426 aa7.85□□□□□ -1.15
PALB2-203ENST00000565038 ADARB2-AS1A8MUL3 147 aa7.85□□□□□ -1.15
PALB2-203ENST00000565038 MMP20O60882 483 aa7.85□□□□□ -1.15
PALB2-203ENST00000565038 MAP3K6O95382 1288 aa7.85□□□□□ -1.15
PALB2-203ENST00000565038 PCSK2P16519 638 aa7.85□□□□□ -1.15
PALB2-203ENST00000565038 ALAS2P22557 587 aa7.85□□□□□ -1.15
PALB2-203ENST00000565038 ARHGAP4P98171 946 aa7.85□□□□□ -1.15
PALB2-203ENST00000565038 MLLT1Q03111 559 aaPredicted RBP7.85□□□□□ -1.15
PALB2-203ENST00000565038 CHSY3Q70JA7 882 aa7.85□□□□□ -1.15
PALB2-203ENST00000565038 DHX32Q7L7V1 743 aaKnown RBP7.85□□□□□ -1.15
PALB2-203ENST00000565038 MDFIQ99750 246 aa7.85□□□□□ -1.15
PALB2-203ENST00000565038 BIN2Q9UBW5 565 aaPredicted RBP7.85□□□□□ -1.15
PALB2-203ENST00000565038 ZBTB42B2RXF5 422 aa7.84□□□□□ -1.15
PALB2-203ENST00000565038 MARSP56192 900 aaKnown RBP7.84□□□□□ -1.15
PALB2-203ENST00000565038 TTC16Q8NEE8 873 aa7.84□□□□□ -1.15
PALB2-203ENST00000565038 SNRPNP63162 240 aaKnown RBP7.83□□□□□ -1.16
PALB2-203ENST00000565038 HFE2Q6ZVN8 426 aa7.83□□□□□ -1.16
PALB2-203ENST00000565038 ZNF438Q7Z4V0 828 aa7.83□□□□□ -1.16
PALB2-203ENST00000565038 ELP3Q9H9T3 547 aa7.83□□□□□ -1.16
PALB2-203ENST00000565038 TLR7Q9NYK1 1049 aaKnown RBP7.83□□□□□ -1.16
PALB2-203ENST00000565038 TMEM63CQ9P1W3 806 aa7.83□□□□□ -1.16
PALB2-203ENST00000565038 BRPF3Q9ULD4 1205 aa7.83□□□□□ -1.16
PALB2-203ENST00000565038 SLC6A14Q9UN76 642 aa7.83□□□□□ -1.16
PALB2-203ENST00000565038 STARD13Q9Y3M8 1113 aa7.83□□□□□ -1.16
PALB2-203ENST00000565038 RPLP1P05386 114 aaKnown RBP7.82□□□□□ -1.16
PALB2-203ENST00000565038 PSAPP07602 524 aa7.82□□□□□ -1.16
PALB2-203ENST00000565038 TTC39BQ5VTQ0 682 aaPredicted RBP7.82□□□□□ -1.16
PALB2-203ENST00000565038 NSUN5Q96P11 429 aaKnown RBP7.82□□□□□ -1.16
PALB2-203ENST00000565038 CNTNAP5Q8WYK1 1306 aa7.81□□□□□ -1.16
PALB2-203ENST00000565038 CPB1P15086 417 aa7.81□□□□□ -1.16
PALB2-203ENST00000565038 HOXB4P17483 251 aaPredicted RBP7.81□□□□□ -1.16
PALB2-203ENST00000565038 PDE12Q6L8Q7 609 aaKnown RBP7.81□□□□□ -1.16
PALB2-203ENST00000565038 FAM35AQ86V20 835 aa7.81□□□□□ -1.16
PALB2-203ENST00000565038 TRPM4Q8TD43 1214 aa7.81□□□□□ -1.16
PALB2-203ENST00000565038 NAGPAQ9UK23 515 aa7.81□□□□□ -1.16
PALB2-203ENST00000565038 J3QW42 95 aa7.8□□□□□ -1.16
PALB2-203ENST00000565038 NDUFB5O43674 189 aa7.8□□□□□ -1.16
PALB2-203ENST00000565038 ALBP02768 609 aa7.8□□□□□ -1.16
PALB2-203ENST00000565038 CYP2E1P05181 493 aaPredicted RBP7.8□□□□□ -1.16
PALB2-203ENST00000565038 USP5P45974 858 aa7.8□□□□□ -1.16
PALB2-203ENST00000565038 GPLD1P80108 840 aa7.8□□□□□ -1.16
PALB2-203ENST00000565038 PLAURQ03405 335 aa7.8□□□□□ -1.16
PALB2-203ENST00000565038 C8orf86Q6ZUL3 223 aa7.8□□□□□ -1.16
PALB2-203ENST00000565038 GJD3Q8N144 294 aa7.8□□□□□ -1.16
PALB2-203ENST00000565038 NUDT8Q8WV74 236 aa7.8□□□□□ -1.16
PALB2-203ENST00000565038 ABI2Q9NYB9 513 aaPredicted RBP7.8□□□□□ -1.16
PALB2-203ENST00000565038 CNTN3Q9P232 1028 aa7.8□□□□□ -1.16
PALB2-203ENST00000565038 M0R082 166 aa7.79□□□□□ -1.16
PALB2-203ENST00000565038 NRLP54845 237 aa7.79□□□□□ -1.16
PALB2-203ENST00000565038 COL13A1Q5TAT6 717 aaPredicted RBP7.79□□□□□ -1.16
PALB2-203ENST00000565038 XKR5Q6UX68 686 aa7.79□□□□□ -1.16
PALB2-203ENST00000565038 HOMEZQ8IX15 550 aa7.79□□□□□ -1.16
PALB2-203ENST00000565038 KCTD17Q8N5Z5 321 aa7.79□□□□□ -1.16
PALB2-203ENST00000565038 OR13H1Q8NG92 308 aa7.79□□□□□ -1.16
PALB2-203ENST00000565038 ZNF417Q8TAU3 575 aa7.79□□□□□ -1.16
PALB2-203ENST00000565038 ZNF587Q96SQ5 575 aaPredicted RBP7.79□□□□□ -1.16
PALB2-203ENST00000565038 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.79□□□□□ -1.16
PALB2-203ENST00000565038 LOC102724428A0A0B4J2F2 783 aa7.78□□□□□ -1.16
PALB2-203ENST00000565038 PATL2C9JE40 543 aaKnown RBP7.78□□□□□ -1.16
PALB2-203ENST00000565038 EIF2AK2P19525 551 aaKnown RBP7.78□□□□□ -1.16
PALB2-203ENST00000565038 DGKGP49619 791 aa7.78□□□□□ -1.16
PALB2-203ENST00000565038 SIK1P57059 783 aa7.78□□□□□ -1.16
PALB2-203ENST00000565038 PCSK7Q16549 785 aa7.78□□□□□ -1.16
PALB2-203ENST00000565038 PSAPL1Q6NUJ1 521 aa7.78□□□□□ -1.16
PALB2-203ENST00000565038 MICALL1Q8N3F8 863 aa7.78□□□□□ -1.16
PALB2-203ENST00000565038 C1orf127Q8N9H9 656 aa7.78□□□□□ -1.16
PALB2-203ENST00000565038 TMC1Q8TDI8 760 aa7.78□□□□□ -1.16
PALB2-203ENST00000565038 KANSL3Q9P2N6 904 aa7.78□□□□□ -1.16
PALB2-203ENST00000565038 FOXD3Q9UJU5 478 aaPredicted RBP7.78□□□□□ -1.16
PALB2-203ENST00000565038 TNFRSF21O75509 655 aa7.77□□□□□ -1.17
PALB2-203ENST00000565038 SOX18P35713 384 aa7.77□□□□□ -1.17
PALB2-203ENST00000565038 EHHADHQ08426 723 aa7.77□□□□□ -1.17
PALB2-203ENST00000565038 PERM1Q5SV97 790 aa7.77□□□□□ -1.17
PALB2-203ENST00000565038 KANK3Q6NY19 840 aa7.77□□□□□ -1.17
PALB2-203ENST00000565038 LINC00114Q6XXX2 140 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms