RNA–Protein interactions for RNA: ENST00000564890.1

PKD1-229, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 574 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-229ENST00000564890 BBOX1O75936 387 aa23.62■■□□□ 1.37
PKD1-229ENST00000564890 CC2D2BQ6DHV5 1058 aa23.62■■□□□ 1.37
PKD1-229ENST00000564890 SLC51AQ86UW1 340 aa23.62■■□□□ 1.37
PKD1-229ENST00000564890 FKBP4Q02790 459 aaKnown RBP eCLIP23.61■■□□□ 1.37
PKD1-229ENST00000564890 CCDC152Q4G0S7 254 aa23.61■■□□□ 1.37
PKD1-229ENST00000564890 ATP6V0A2Q9Y487 856 aa23.61■■□□□ 1.37
PKD1-229ENST00000564890 RARSP54136 660 aaKnown RBP23.6■■□□□ 1.37
PKD1-229ENST00000564890 CTSWP56202 376 aa23.6■■□□□ 1.37
PKD1-229ENST00000564890 ZNF526Q8TF50 670 aaPredicted RBP23.6■■□□□ 1.37
PKD1-229ENST00000564890 SRCIN1Q9C0H9 1055 aa23.6■■□□□ 1.37
PKD1-229ENST00000564890 TMX4Q9H1E5 349 aaPredicted RBP23.6■■□□□ 1.37
PKD1-229ENST00000564890 TAF1P21675 1872 aa23.6■■□□□ 1.37
PKD1-229ENST00000564890 SNED1Q8TER0 1413 aa23.59■■□□□ 1.37
PKD1-229ENST00000564890 ALDH1L1O75891 902 aa23.59■■□□□ 1.37
PKD1-229ENST00000564890 CASP7P55210 303 aa23.59■■□□□ 1.37
PKD1-229ENST00000564890 CELF1Q92879 486 aaKnown RBP23.59■■□□□ 1.37
PKD1-229ENST00000564890 CCDC85AQ96PX6 553 aaPredicted RBP23.59■■□□□ 1.37
PKD1-229ENST00000564890 CCDC88AQ3V6T2 1871 aa23.59■■□□□ 1.37
PKD1-229ENST00000564890 GRIPAP1Q4V328 841 aa23.58■■□□□ 1.37
PKD1-229ENST00000564890 SEC31BQ9NQW1 1179 aa23.58■■□□□ 1.37
PKD1-229ENST00000564890 ZNF277Q9NRM2 450 aaPredicted RBP23.58■■□□□ 1.37
PKD1-229ENST00000564890 BRPF1P55201 1214 aaPredicted RBP23.57■■□□□ 1.36
PKD1-229ENST00000564890 TMC4Q7Z404 712 aa23.57■■□□□ 1.36
PKD1-229ENST00000564890 SP8Q8IXZ3 490 aa23.57■■□□□ 1.36
PKD1-229ENST00000564890 PSMD1Q99460 953 aa23.57■■□□□ 1.36
PKD1-229ENST00000564890 NOB1Q9ULX3 412 aaKnown RBP23.57■■□□□ 1.36
PKD1-229ENST00000564890 TTLL11Q8NHH1 800 aa23.56■■□□□ 1.36
PKD1-229ENST00000564890 PLA2G12BQ9BX93 195 aa23.56■■□□□ 1.36
PKD1-229ENST00000564890 COL4A1P02462 1669 aa23.56■■□□□ 1.36
PKD1-229ENST00000564890 ZC3H4Q9UPT8 1303 aaKnown RBP23.56■■□□□ 1.36
PKD1-229ENST00000564890 GRM8O00222 908 aa23.55■■□□□ 1.36
PKD1-229ENST00000564890 RPS8P62241 208 aaKnown RBP23.55■■□□□ 1.36
PKD1-229ENST00000564890 GPBP1L1Q9HC44 474 aaPredicted RBP23.55■■□□□ 1.36
PKD1-229ENST00000564890 C9orf78Q9NZ63 289 aaPredicted RBP23.55■■□□□ 1.36
PKD1-229ENST00000564890 TIAM2Q8IVF5 1701 aa23.55■■□□□ 1.36
PKD1-229ENST00000564890 MYH3P11055 1940 aa23.55■■□□□ 1.36
PKD1-229ENST00000564890 DICER1Q9UPY3 1922 aaKnown RBP23.53■■□□□ 1.36
PKD1-229ENST00000564890 IARSP41252 1262 aaKnown RBP23.53■■□□□ 1.36
PKD1-229ENST00000564890 GREM2Q9H772 168 aa23.53■■□□□ 1.36
PKD1-229ENST00000564890 KIF16BQ96L93 1317 aa23.53■■□□□ 1.36
PKD1-229ENST00000564890 DPP8Q6V1X1 898 aaPredicted RBP23.52■■□□□ 1.36
PKD1-229ENST00000564890 MPNDQ8N594 471 aa23.52■■□□□ 1.36
PKD1-229ENST00000564890 API5Q9BZZ5 524 aaKnown RBP23.52■■□□□ 1.36
PKD1-229ENST00000564890 RTL9Q8NET4 1388 aa23.52■■□□□ 1.36
PKD1-229ENST00000564890 LRRC37AA6NMS7 1700 aa23.51■■□□□ 1.35
PKD1-229ENST00000564890 BCAR3O75815 825 aa23.51■■□□□ 1.35
PKD1-229ENST00000564890 ANKRD18AQ8IVF6 992 aa23.51■■□□□ 1.35
PKD1-229ENST00000564890 CDC5LQ99459 802 aaKnown RBP23.51■■□□□ 1.35
PKD1-229ENST00000564890 CSF1RP07333 972 aa23.5■■□□□ 1.35
PKD1-229ENST00000564890 FOXO4P98177 505 aa23.49■■□□□ 1.35
PKD1-229ENST00000564890 FAM161AQ3B820 660 aa23.49■■□□□ 1.35
PKD1-229ENST00000564890 SUPT20HQ8NEM7 779 aa23.49■■□□□ 1.35
PKD1-229ENST00000564890 RTFDC1Q9BY42 306 aaPredicted RBP23.49■■□□□ 1.35
PKD1-229ENST00000564890 KDM2BQ8NHM5 1336 aa23.49■■□□□ 1.35
PKD1-229ENST00000564890 NBPF7P0C2Y1 421 aaPredicted RBP23.48■■□□□ 1.35
PKD1-229ENST00000564890 ITGA6P23229 1130 aa23.48■■□□□ 1.35
PKD1-229ENST00000564890 LARGE2Q8N3Y3 721 aa23.48■■□□□ 1.35
PKD1-229ENST00000564890 ARHGAP45Q92619 1136 aa23.48■■□□□ 1.35
PKD1-229ENST00000564890 UTYO14607 1347 aa23.48■■□□□ 1.35
PKD1-229ENST00000564890 GLTPD2A6NH11 291 aa23.47■■□□□ 1.35
PKD1-229ENST00000564890 PPIP5K2O43314 1243 aa23.47■■□□□ 1.35
PKD1-229ENST00000564890 CCT4P50991 539 aaKnown RBP23.47■■□□□ 1.35
PKD1-229ENST00000564890 GPSM2P81274 684 aa23.47■■□□□ 1.35
PKD1-229ENST00000564890 EPHA10Q5JZY3 1008 aa23.47■■□□□ 1.35
PKD1-229ENST00000564890 FRAT1Q92837 279 aaPredicted RBP23.47■■□□□ 1.35
PKD1-229ENST00000564890 SUCLG2Q96I99 432 aa23.47■■□□□ 1.35
PKD1-229ENST00000564890 NSFL1CQ9UNZ2 370 aaKnown RBP23.47■■□□□ 1.35
PKD1-229ENST00000564890 CHMP3Q9Y3E7 222 aa23.47■■□□□ 1.35
PKD1-229ENST00000564890 IPO8O15397 1037 aaKnown RBP23.46■■□□□ 1.35
PKD1-229ENST00000564890 AOC3Q16853 763 aa23.46■■□□□ 1.35
PKD1-229ENST00000564890 DPY19L2Q6NUT2 758 aa23.46■■□□□ 1.35
PKD1-229ENST00000564890 LMBR1LQ6UX01 489 aa23.46■■□□□ 1.35
PKD1-229ENST00000564890 JDP2Q8WYK2 163 aa23.46■■□□□ 1.35
PKD1-229ENST00000564890 NMRK2Q9NPI5 230 aa23.46■■□□□ 1.35
PKD1-229ENST00000564890 DUOX1Q9NRD9 1551 aa23.45■■□□□ 1.34
PKD1-229ENST00000564890 IGHMBP2P38935 993 aaKnown RBP23.45■■□□□ 1.34
PKD1-229ENST00000564890 USP44Q9H0E7 712 aa23.45■■□□□ 1.34
PKD1-229ENST00000564890 VPS33BQ9H267 617 aa23.45■■□□□ 1.34
PKD1-229ENST00000564890 COL4A5P29400 1685 aa23.44■■□□□ 1.34
PKD1-229ENST00000564890 ANKRD18BA2A2Z9 1011 aa23.44■■□□□ 1.34
PKD1-229ENST00000564890 BSDC1Q9NW68 430 aaPredicted RBP23.44■■□□□ 1.34
PKD1-229ENST00000564890 ANKIB1Q9P2G1 1089 aa23.44■■□□□ 1.34
PKD1-229ENST00000564890 SPEF2Q9C093 1822 aa23.43■■□□□ 1.34
PKD1-229ENST00000564890 ZNF541Q9H0D2 1346 aa23.43■■□□□ 1.34
PKD1-229ENST00000564890 C6orf229H3BNL8 230 aa23.43■■□□□ 1.34
PKD1-229ENST00000564890 FZD9O00144 591 aa23.43■■□□□ 1.34
PKD1-229ENST00000564890 IFIT5Q13325 482 aaKnown RBP23.43■■□□□ 1.34
PKD1-229ENST00000564890 NIM1KQ8IY84 436 aa23.43■■□□□ 1.34
PKD1-229ENST00000564890 KAZALD1Q96I82 304 aa23.43■■□□□ 1.34
PKD1-229ENST00000564890 POLLQ9UGP5 575 aa23.43■■□□□ 1.34
PKD1-229ENST00000564890 TRIM27P14373 513 aa23.42■■□□□ 1.34
PKD1-229ENST00000564890 KIAA2012Q0VF49 1180 aa23.42■■□□□ 1.34
PKD1-229ENST00000564890 ATF7IPQ6VMQ6 1270 aa23.42■■□□□ 1.34
PKD1-229ENST00000564890 RRAGCQ9HB90 399 aa23.42■■□□□ 1.34
PKD1-229ENST00000564890 PODXL2Q9NZ53 605 aa23.42■■□□□ 1.34
PKD1-229ENST00000564890 LTBP1Q14766 1721 aa23.42■■□□□ 1.34
PKD1-229ENST00000564890 KIF3CO14782 793 aa23.41■■□□□ 1.34
PKD1-229ENST00000564890 DDNO94850 711 aaPredicted RBP23.41■■□□□ 1.34
PKD1-229ENST00000564890 TBC1D16Q8TBP0 767 aa23.41■■□□□ 1.34
PKD1-229ENST00000564890 MPHOSPH8Q99549 860 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms