RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 HDAC5Q9UQL6 1122 aa9.16□□□□□ -0.94
MAP1LC3B-205ENST00000564638 AK9Q5TCS8 1911 aa9.15□□□□□ -0.94
MAP1LC3B-205ENST00000564638 ALDH1L1O75891 902 aa9.15□□□□□ -0.94
MAP1LC3B-205ENST00000564638 DDX58O95786 925 aaKnown RBP9.15□□□□□ -0.94
MAP1LC3B-205ENST00000564638 GTF2E1P29083 439 aaPredicted RBP9.15□□□□□ -0.94
MAP1LC3B-205ENST00000564638 ATP8B2P98198 1209 aa9.15□□□□□ -0.94
MAP1LC3B-205ENST00000564638 TTC22Q5TAA0 569 aa9.15□□□□□ -0.94
MAP1LC3B-205ENST00000564638 ANKRD13DQ6ZTN6 518 aa9.15□□□□□ -0.94
MAP1LC3B-205ENST00000564638 PLEKHM2Q8IWE5 1019 aa9.15□□□□□ -0.94
MAP1LC3B-205ENST00000564638 CNBD1Q8NA66 436 aa9.15□□□□□ -0.94
MAP1LC3B-205ENST00000564638 PLBD2Q8NHP8 589 aa9.15□□□□□ -0.94
MAP1LC3B-205ENST00000564638 C22orf23Q9BZE7 217 aa9.15□□□□□ -0.94
MAP1LC3B-205ENST00000564638 PCDH10Q9P2E7 1040 aa9.15□□□□□ -0.94
MAP1LC3B-205ENST00000564638 LRRFIP2Q9Y608 721 aaKnown RBP9.15□□□□□ -0.94
MAP1LC3B-205ENST00000564638 KIF13BQ9NQT8 1826 aa9.15□□□□□ -0.95
MAP1LC3B-205ENST00000564638 C10orf71Q711Q0 1435 aa9.14□□□□□ -0.95
MAP1LC3B-205ENST00000564638 NRXN2Q9P2S2 1712 aa9.14□□□□□ -0.95
MAP1LC3B-205ENST00000564638 TNRC18O15417 2968 aaPredicted RBP9.14□□□□□ -0.95
MAP1LC3B-205ENST00000564638 PI4KAP2A4QPH2 592 aa9.14□□□□□ -0.95
MAP1LC3B-205ENST00000564638 APBB1O00213 710 aa9.14□□□□□ -0.95
MAP1LC3B-205ENST00000564638 ST5P78524 1137 aa9.14□□□□□ -0.95
MAP1LC3B-205ENST00000564638 HSP90AB3PQ58FF7 597 aa9.14□□□□□ -0.95
MAP1LC3B-205ENST00000564638 BEND3Q5T5X7 828 aa9.14□□□□□ -0.95
MAP1LC3B-205ENST00000564638 PRR5LQ6MZQ0 368 aa9.14□□□□□ -0.95
MAP1LC3B-205ENST00000564638 KSR2Q6VAB6 950 aa9.14□□□□□ -0.95
MAP1LC3B-205ENST00000564638 PI4KAP1Q8N8J0 262 aa9.14□□□□□ -0.95
MAP1LC3B-205ENST00000564638 MYD88Q99836 296 aa9.14□□□□□ -0.95
MAP1LC3B-205ENST00000564638 USP44Q9H0E7 712 aa9.14□□□□□ -0.95
MAP1LC3B-205ENST00000564638 CD2APQ9Y5K6 639 aa9.14□□□□□ -0.95
MAP1LC3B-205ENST00000564638 IBTKQ9P2D0 1353 aaPredicted RBP9.13□□□□□ -0.95
MAP1LC3B-205ENST00000564638 ANKRD31Q8N7Z5 1873 aa9.13□□□□□ -0.95
MAP1LC3B-205ENST00000564638 UBN2Q6ZU65 1347 aa9.13□□□□□ -0.95
MAP1LC3B-205ENST00000564638 ATP5J2-PTCD1G3V325 749 aa9.13□□□□□ -0.95
MAP1LC3B-205ENST00000564638 RGL2O15211 777 aa9.13□□□□□ -0.95
MAP1LC3B-205ENST00000564638 TCIRG1Q13488 830 aa9.13□□□□□ -0.95
MAP1LC3B-205ENST00000564638 RTL5Q5HYW3 569 aaPredicted RBP9.13□□□□□ -0.95
MAP1LC3B-205ENST00000564638 CASC1Q6TDU7 716 aa9.13□□□□□ -0.95
MAP1LC3B-205ENST00000564638 PPP1R42Q7Z4L9 355 aa9.13□□□□□ -0.95
MAP1LC3B-205ENST00000564638 NUTM1Q86Y26 1132 aa9.13□□□□□ -0.95
MAP1LC3B-205ENST00000564638 ZNF34Q8IZ26 560 aa9.13□□□□□ -0.95
MAP1LC3B-205ENST00000564638 LRRCC1Q9C099 1032 aa9.13□□□□□ -0.95
MAP1LC3B-205ENST00000564638 NYXQ9GZU5 481 aa9.13□□□□□ -0.95
MAP1LC3B-205ENST00000564638 MAP3K2Q9Y2U5 619 aa9.13□□□□□ -0.95
MAP1LC3B-205ENST00000564638 CACNA1SQ13698 1873 aa9.13□□□□□ -0.95
MAP1LC3B-205ENST00000564638 A0A0G2JLW4 131 aa9.12□□□□□ -0.95
MAP1LC3B-205ENST00000564638 SMARCA5O60264 1052 aaPredicted RBP9.12□□□□□ -0.95
MAP1LC3B-205ENST00000564638 DPEP1P16444 411 aa9.12□□□□□ -0.95
MAP1LC3B-205ENST00000564638 CHRNA5P30532 468 aa9.12□□□□□ -0.95
MAP1LC3B-205ENST00000564638 PARP10Q53GL7 1025 aa9.12□□□□□ -0.95
MAP1LC3B-205ENST00000564638 SUSD4Q5VX71 490 aa9.12□□□□□ -0.95
MAP1LC3B-205ENST00000564638 TPTE2Q6XPS3 522 aa9.12□□□□□ -0.95
MAP1LC3B-205ENST00000564638 TBC1D9Q6ZT07 1266 aa9.12□□□□□ -0.95
MAP1LC3B-205ENST00000564638 SSH3Q8TE77 659 aa9.12□□□□□ -0.95
MAP1LC3B-205ENST00000564638 EXOC6BQ9Y2D4 811 aa9.12□□□□□ -0.95
MAP1LC3B-205ENST00000564638 KIAA1551Q9HCM1 1747 aa9.11□□□□□ -0.95
MAP1LC3B-205ENST00000564638 AOX1Q06278 1338 aa9.11□□□□□ -0.95
MAP1LC3B-205ENST00000564638 PNMA6EA0A0J9YXQ4 647 aa9.11□□□□□ -0.95
MAP1LC3B-205ENST00000564638 RAB11FIP3O75154 756 aa9.11□□□□□ -0.95
MAP1LC3B-205ENST00000564638 TOMM70O94826 608 aa9.11□□□□□ -0.95
MAP1LC3B-205ENST00000564638 GSPT1P15170 499 aaKnown RBP9.11□□□□□ -0.95
MAP1LC3B-205ENST00000564638 SLC4A3P48751 1232 aa9.11□□□□□ -0.95
MAP1LC3B-205ENST00000564638 RBM25P49756 843 aaKnown RBP9.11□□□□□ -0.95
MAP1LC3B-205ENST00000564638 NEXNQ0ZGT2 675 aa9.11□□□□□ -0.95
MAP1LC3B-205ENST00000564638 POLA2Q14181 598 aa9.11□□□□□ -0.95
MAP1LC3B-205ENST00000564638 ERFEQ4G0M1 354 aa9.11□□□□□ -0.95
MAP1LC3B-205ENST00000564638 HSP90AB4PQ58FF6 505 aa9.11□□□□□ -0.95
MAP1LC3B-205ENST00000564638 NLRP10Q86W26 655 aa9.11□□□□□ -0.95
MAP1LC3B-205ENST00000564638 C2CD5Q86YS7 1000 aa9.11□□□□□ -0.95
MAP1LC3B-205ENST00000564638 LINS1Q8NG48 757 aa9.11□□□□□ -0.95
MAP1LC3B-205ENST00000564638 METTL22Q9BUU2 404 aaPredicted RBP9.11□□□□□ -0.95
MAP1LC3B-205ENST00000564638 UTP14AQ9BVJ6 771 aaKnown RBP9.11□□□□□ -0.95
MAP1LC3B-205ENST00000564638 BCL11AQ9H165 835 aa9.11□□□□□ -0.95
MAP1LC3B-205ENST00000564638 OSBPL3Q9H4L5 887 aa9.11□□□□□ -0.95
MAP1LC3B-205ENST00000564638 C9orf78Q9NZ63 289 aaPredicted RBP9.11□□□□□ -0.95
MAP1LC3B-205ENST00000564638 TRMT112Q9UI30 125 aaKnown RBP9.11□□□□□ -0.95
MAP1LC3B-205ENST00000564638 COL11A2P13942 1736 aaPredicted RBP9.11□□□□□ -0.95
MAP1LC3B-205ENST00000564638 ABCC12Q96J65 1359 aa9.11□□□□□ -0.95
MAP1LC3B-205ENST00000564638 H0YIN7 160 aa9.1□□□□□ -0.95
MAP1LC3B-205ENST00000564638 NTSR2O95665 410 aa9.1□□□□□ -0.95
MAP1LC3B-205ENST00000564638 ATXN8OSP0DMR3 200 aa9.1□□□□□ -0.95
MAP1LC3B-205ENST00000564638 PDE6BP35913 854 aa9.1□□□□□ -0.95
MAP1LC3B-205ENST00000564638 TGFB2P61812 414 aa9.1□□□□□ -0.95
MAP1LC3B-205ENST00000564638 NBR1Q14596 966 aa9.1□□□□□ -0.95
MAP1LC3B-205ENST00000564638 C16orf71Q8IYS4 520 aaPredicted RBP9.1□□□□□ -0.95
MAP1LC3B-205ENST00000564638 OTUD7AQ8TE49 926 aaPredicted RBP9.1□□□□□ -0.95
MAP1LC3B-205ENST00000564638 ZNF622Q969S3 477 aaKnown RBP eCLIP9.1□□□□□ -0.955e-7■□□□□ 9.2
MAP1LC3B-205ENST00000564638 ISCA1Q9BUE6 129 aa9.1□□□□□ -0.95
MAP1LC3B-205ENST00000564638 BRIP1Q9BX63 1249 aa9.1□□□□□ -0.95
MAP1LC3B-205ENST00000564638 TNRC6CQ9HCJ0 1690 aaKnown RBP9.1□□□□□ -0.95
MAP1LC3B-205ENST00000564638 SRGAP3O43295 1099 aa9.09□□□□□ -0.95
MAP1LC3B-205ENST00000564638 NBPF7P0C2Y1 421 aaPredicted RBP9.09□□□□□ -0.95
MAP1LC3B-205ENST00000564638 HCLS1P14317 486 aaPredicted RBP9.09□□□□□ -0.95
MAP1LC3B-205ENST00000564638 MX1P20591 662 aa9.09□□□□□ -0.95
MAP1LC3B-205ENST00000564638 PDE1AP54750 535 aa9.09□□□□□ -0.95
MAP1LC3B-205ENST00000564638 MTX1Q13505 466 aa9.09□□□□□ -0.95
MAP1LC3B-205ENST00000564638 CWF19L2Q2TBE0 894 aaKnown RBP9.09□□□□□ -0.95
MAP1LC3B-205ENST00000564638 HSCBQ8IWL3 235 aa9.09□□□□□ -0.95
MAP1LC3B-205ENST00000564638 SYNE4Q8N205 404 aa9.09□□□□□ -0.95
MAP1LC3B-205ENST00000564638 JARID2Q92833 1246 aaPredicted RBP9.09□□□□□ -0.95
MAP1LC3B-205ENST00000564638 NMRK2Q9NPI5 230 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms