RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 ATP5J2-PTCD1G3V325 749 aa19.36■□□□□ 0.69
SPG7-210ENST00000564409 ZNRF3Q9ULT6 936 aa19.36■□□□□ 0.69
SPG7-210ENST00000564409 CLEC11AQ9Y240 323 aa19.36■□□□□ 0.69
SPG7-210ENST00000564409 GJA3Q9Y6H8 435 aa19.36■□□□□ 0.69
SPG7-210ENST00000564409 TAF1P21675 1872 aa19.36■□□□□ 0.69
SPG7-210ENST00000564409 LRRC37AA6NMS7 1700 aa19.36■□□□□ 0.69
SPG7-210ENST00000564409 ELL2O00472 640 aaPredicted RBP19.35■□□□□ 0.69
SPG7-210ENST00000564409 ITGBL1O95965 494 aaPredicted RBP19.35■□□□□ 0.69
SPG7-210ENST00000564409 KIAA2012Q0VF49 1180 aa19.35■□□□□ 0.69
SPG7-210ENST00000564409 AOC3Q16853 763 aa19.35■□□□□ 0.69
SPG7-210ENST00000564409 ZBTB38Q8NAP3 1195 aaPredicted RBP19.35■□□□□ 0.69
SPG7-210ENST00000564409 C8orf58Q8NAV2 365 aa19.35■□□□□ 0.69
SPG7-210ENST00000564409 CCDC191Q8NCU4 936 aa19.35■□□□□ 0.69
SPG7-210ENST00000564409 CACNA1FO60840 1977 aa19.35■□□□□ 0.69
SPG7-210ENST00000564409 IL16Q14005 1332 aa19.34■□□□□ 0.69
SPG7-210ENST00000564409 IRS4O14654 1257 aaPredicted RBP19.34■□□□□ 0.69
SPG7-210ENST00000564409 CDHR2Q9BYE9 1310 aa19.33■□□□□ 0.69
SPG7-210ENST00000564409 ZNF316A6NFI3 1004 aaPredicted RBP19.33■□□□□ 0.68
SPG7-210ENST00000564409 ANP32CO43423 234 aa19.33■□□□□ 0.68
SPG7-210ENST00000564409 USP50Q70EL3 339 aaPredicted RBP19.33■□□□□ 0.68
SPG7-210ENST00000564409 WWC1Q8IX03 1113 aa19.33■□□□□ 0.68
SPG7-210ENST00000564409 PHAXQ9H814 394 aaKnown RBP19.33■□□□□ 0.68
SPG7-210ENST00000564409 TMEM88BA6NKF7 163 aa19.32■□□□□ 0.68
SPG7-210ENST00000564409 SCNN1DP51172 638 aa19.32■□□□□ 0.68
SPG7-210ENST00000564409 TNIP1Q15025 636 aa19.32■□□□□ 0.68
SPG7-210ENST00000564409 CCDC184Q52MB2 194 aa19.32■□□□□ 0.68
SPG7-210ENST00000564409 CNTROBQ8N137 903 aa19.32■□□□□ 0.68
SPG7-210ENST00000564409 STK31Q9BXU1 1019 aa19.32■□□□□ 0.68
SPG7-210ENST00000564409 PCCAP05165 728 aaPredicted RBP19.31■□□□□ 0.68
SPG7-210ENST00000564409 CXCL9Q07325 125 aa19.31■□□□□ 0.68
SPG7-210ENST00000564409 METTL22Q9BUU2 404 aaPredicted RBP19.31■□□□□ 0.68
SPG7-210ENST00000564409 MRS2Q9HD23 443 aa19.31■□□□□ 0.68
SPG7-210ENST00000564409 CWC25Q9NXE8 425 aaPredicted RBP19.31■□□□□ 0.68
SPG7-210ENST00000564409 RPS8P62241 208 aaKnown RBP19.3■□□□□ 0.68
SPG7-210ENST00000564409 CIAPIN1Q6FI81 312 aa19.3■□□□□ 0.68
SPG7-210ENST00000564409 SLC51AQ86UW1 340 aa19.3■□□□□ 0.68
SPG7-210ENST00000564409 MYD88Q99836 296 aa19.3■□□□□ 0.68
SPG7-210ENST00000564409 GPRC5DQ9NZD1 345 aa19.3■□□□□ 0.68
SPG7-210ENST00000564409 LTBP1Q14766 1721 aa19.3■□□□□ 0.68
SPG7-210ENST00000564409 EPS15P42566 896 aa19.29■□□□□ 0.68
SPG7-210ENST00000564409 CCDC152Q4G0S7 254 aa19.29■□□□□ 0.68
SPG7-210ENST00000564409 KSR2Q6VAB6 950 aa19.29■□□□□ 0.68
SPG7-210ENST00000564409 CELF1Q92879 486 aaKnown RBP19.29■□□□□ 0.68
SPG7-210ENST00000564409 ADARB2Q9NS39 739 aaKnown RBP19.29■□□□□ 0.68
SPG7-210ENST00000564409 CNTNAP1P78357 1384 aa19.29■□□□□ 0.68
SPG7-210ENST00000564409 DUOX1Q9NRD9 1551 aa19.28■□□□□ 0.68
SPG7-210ENST00000564409 PDE8AO60658 829 aa19.28■□□□□ 0.68
SPG7-210ENST00000564409 TWISTNBQ3B726 338 aaPredicted RBP19.28■□□□□ 0.68
SPG7-210ENST00000564409 RTL5Q5HYW3 569 aaPredicted RBP19.28■□□□□ 0.68
SPG7-210ENST00000564409 MAP1SQ66K74 1059 aaPredicted RBP19.28■□□□□ 0.68
SPG7-210ENST00000564409 TSPYL6Q8N831 410 aa19.28■□□□□ 0.68
SPG7-210ENST00000564409 EYA3Q99504 573 aa19.28■□□□□ 0.68
SPG7-210ENST00000564409 NSFL1CQ9UNZ2 370 aaKnown RBP19.28■□□□□ 0.68
SPG7-210ENST00000564409 TRPM7Q96QT4 1865 aa19.27■□□□□ 0.68
SPG7-210ENST00000564409 NEXNQ0ZGT2 675 aa19.27■□□□□ 0.68
SPG7-210ENST00000564409 WASHC4Q2M389 1173 aa19.27■□□□□ 0.68
SPG7-210ENST00000564409 WDR63Q8IWG1 891 aa19.27■□□□□ 0.68
SPG7-210ENST00000564409 TSR2Q969E8 191 aaKnown RBP19.27■□□□□ 0.68
SPG7-210ENST00000564409 ZNF428Q96B54 188 aa19.27■□□□□ 0.68
SPG7-210ENST00000564409 MAP3K2Q9Y2U5 619 aa19.27■□□□□ 0.68
SPG7-210ENST00000564409 MYH3P11055 1940 aa19.26■□□□□ 0.67
SPG7-210ENST00000564409 PODXL2Q9NZ53 605 aa19.26■□□□□ 0.67
SPG7-210ENST00000564409 MKRN1Q9UHC7 482 aaKnown RBP19.26■□□□□ 0.67
SPG7-210ENST00000564409 PI4KAP2A4QPH2 592 aa19.25■□□□□ 0.67
SPG7-210ENST00000564409 C6orf229H3BNL8 230 aa19.25■□□□□ 0.67
SPG7-210ENST00000564409 GMPSP49915 693 aaPredicted RBP19.25■□□□□ 0.67
SPG7-210ENST00000564409 PI4KAP1Q8N8J0 262 aa19.25■□□□□ 0.67
SPG7-210ENST00000564409 ZC3H15Q8WU90 426 aaKnown RBP19.25■□□□□ 0.67
SPG7-210ENST00000564409 BCL2L13Q9BXK5 485 aa19.25■□□□□ 0.67
SPG7-210ENST00000564409 HSPA1AP0DMV8 641 aaKnown RBP19.24■□□□□ 0.67
SPG7-210ENST00000564409 HSPA1BP0DMV9 641 aaKnown RBP19.24■□□□□ 0.67
SPG7-210ENST00000564409 DPF2Q92785 391 aa19.24■□□□□ 0.67
SPG7-210ENST00000564409 RASSF10A6NK89 507 aa19.23■□□□□ 0.67
SPG7-210ENST00000564409 RAD17O75943 681 aa19.23■□□□□ 0.67
SPG7-210ENST00000564409 SLC4A2P04920 1241 aa19.23■□□□□ 0.67
SPG7-210ENST00000564409 GPSM2P81274 684 aa19.23■□□□□ 0.67
SPG7-210ENST00000564409 POLLQ9UGP5 575 aa19.23■□□□□ 0.67
SPG7-210ENST00000564409 PGAP2Q9UHJ9 254 aa19.23■□□□□ 0.67
SPG7-210ENST00000564409 YDJCA8MPS7 323 aa19.22■□□□□ 0.67
SPG7-210ENST00000564409 H7C1D1 291 aa19.22■□□□□ 0.67
SPG7-210ENST00000564409 RPS12P25398 132 aaKnown RBP19.22■□□□□ 0.67
SPG7-210ENST00000564409 DEFB115Q30KQ5 88 aa19.22■□□□□ 0.67
SPG7-210ENST00000564409 TBC1D16Q8TBP0 767 aa19.22■□□□□ 0.67
SPG7-210ENST00000564409 ZC3H12CQ9C0D7 883 aaKnown RBP19.22■□□□□ 0.67
SPG7-210ENST00000564409 IGKV5-2P06315 115 aa19.21■□□□□ 0.67
SPG7-210ENST00000564409 ANKRD18AQ8IVF6 992 aa19.21■□□□□ 0.67
SPG7-210ENST00000564409 CDC5LQ99459 802 aaKnown RBP19.21■□□□□ 0.67
SPG7-210ENST00000564409 SEC31BQ9NQW1 1179 aa19.21■□□□□ 0.67
SPG7-210ENST00000564409 ANKIB1Q9P2G1 1089 aa19.21■□□□□ 0.67
SPG7-210ENST00000564409 CNOT7Q9UIV1 285 aaKnown RBP19.21■□□□□ 0.67
SPG7-210ENST00000564409 FANCIQ9NVI1 1328 aa19.21■□□□□ 0.67
SPG7-210ENST00000564409 RTL9Q8NET4 1388 aa19.2■□□□□ 0.66
SPG7-210ENST00000564409 VEGFBP49765 207 aa19.2■□□□□ 0.66
SPG7-210ENST00000564409 CTSWP56202 376 aa19.2■□□□□ 0.66
SPG7-210ENST00000564409 GGA1Q9UJY5 639 aa19.2■□□□□ 0.66
SPG7-210ENST00000564409 NEURL1BA8MQ27 555 aa19.19■□□□□ 0.66
SPG7-210ENST00000564409 RIMBP2O15034 1052 aa19.19■□□□□ 0.66
SPG7-210ENST00000564409 ECE2O60344 883 aa19.19■□□□□ 0.66
SPG7-210ENST00000564409 FLIIQ13045 1269 aa19.19■□□□□ 0.66
SPG7-210ENST00000564409 COL13A1Q5TAT6 717 aaPredicted RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms