RNA–Protein interactions for RNA: ENST00000564383.1

HERC2-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 471 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-205ENST00000564383 PNMA3Q9UL41 463 aa8.59□□□□□ -1.03
HERC2-205ENST00000564383 USP16Q9Y5T5 823 aa8.59□□□□□ -1.03
HERC2-205ENST00000564383 ATP10DQ9P241 1426 aa8.59□□□□□ -1.03
HERC2-205ENST00000564383 TOGARAM1Q9Y4F4 1720 aa8.59□□□□□ -1.03
HERC2-205ENST00000564383 ADCY9O60503 1353 aa8.59□□□□□ -1.03
HERC2-205ENST00000564383 EXOC5O00471 708 aa8.58□□□□□ -1.04
HERC2-205ENST00000564383 CCT4P50991 539 aaKnown RBP8.58□□□□□ -1.04
HERC2-205ENST00000564383 PRR20EP86478 221 aa8.58□□□□□ -1.04
HERC2-205ENST00000564383 PRR20CP86479 221 aa8.58□□□□□ -1.04
HERC2-205ENST00000564383 PRR20DP86480 221 aa8.58□□□□□ -1.04
HERC2-205ENST00000564383 PRR20BP86481 221 aa8.58□□□□□ -1.04
HERC2-205ENST00000564383 PRR20AP86496 221 aa8.58□□□□□ -1.04
HERC2-205ENST00000564383 SMC5Q8IY18 1101 aa8.58□□□□□ -1.04
HERC2-205ENST00000564383 TTC5Q8N0Z6 440 aa8.58□□□□□ -1.04
HERC2-205ENST00000564383 MARCH10Q8NA82 808 aaPredicted RBP8.58□□□□□ -1.04
HERC2-205ENST00000564383 EMID1Q96A84 441 aaPredicted RBP8.58□□□□□ -1.04
HERC2-205ENST00000564383 DDX21Q9NR30 783 aaKnown RBP eCLIP8.58□□□□□ -1.04
HERC2-205ENST00000564383 BCL9O00512 1426 aa8.57□□□□□ -1.04
HERC2-205ENST00000564383 PI4KAP2A4QPH2 592 aa8.57□□□□□ -1.04
HERC2-205ENST00000564383 SLC19A1P41440 591 aa8.57□□□□□ -1.04
HERC2-205ENST00000564383 BEND3Q5T5X7 828 aa8.57□□□□□ -1.04
HERC2-205ENST00000564383 NBPF14Q5TI25 921 aa8.57□□□□□ -1.04
HERC2-205ENST00000564383 NBPF10Q6P3W6 841 aaKnown RBP8.57□□□□□ -1.04
HERC2-205ENST00000564383 SLC4A10Q6U841 1118 aa8.57□□□□□ -1.04
HERC2-205ENST00000564383 NBPF15Q8N660 670 aa8.57□□□□□ -1.04
HERC2-205ENST00000564383 PI4KAP1Q8N8J0 262 aa8.57□□□□□ -1.04
HERC2-205ENST00000564383 CHMP4AQ9BY43 222 aa8.57□□□□□ -1.04
HERC2-205ENST00000564383 RWDD1Q9H446 243 aaPredicted RBP8.57□□□□□ -1.04
HERC2-205ENST00000564383 ATG3Q9NT62 314 aa8.57□□□□□ -1.04
HERC2-205ENST00000564383 TMOD3Q9NYL9 352 aa8.57□□□□□ -1.04
HERC2-205ENST00000564383 ASAP1Q9ULH1 1129 aa8.57□□□□□ -1.04
HERC2-205ENST00000564383 PAPPAQ13219 1627 aa8.57□□□□□ -1.04
HERC2-205ENST00000564383 NWD2Q9ULI1 1742 aa8.57□□□□□ -1.04
HERC2-205ENST00000564383 PXDNLA1KZ92 1463 aa8.57□□□□□ -1.04
HERC2-205ENST00000564383 PTCD1O75127 700 aaKnown RBP8.56□□□□□ -1.04
HERC2-205ENST00000564383 PIP4K2AP48426 406 aaPredicted RBP8.56□□□□□ -1.04
HERC2-205ENST00000564383 DDB1Q16531 1140 aa8.56□□□□□ -1.04
HERC2-205ENST00000564383 CEP85Q6P2H3 762 aa8.56□□□□□ -1.04
HERC2-205ENST00000564383 DNAAF4Q8WXU2 420 aa8.56□□□□□ -1.04
HERC2-205ENST00000564383 SLC4A9Q96Q91 983 aa8.56□□□□□ -1.04
HERC2-205ENST00000564383 USP44Q9H0E7 712 aa8.56□□□□□ -1.04
HERC2-205ENST00000564383 CHMP4BQ9H444 224 aaKnown RBP8.56□□□□□ -1.04
HERC2-205ENST00000564383 HYPKQ9NX55 129 aa8.56□□□□□ -1.04
HERC2-205ENST00000564383 CCDC9Q9Y3X0 531 aaKnown RBP8.56□□□□□ -1.04
HERC2-205ENST00000564383 C5P01031 1676 aa8.56□□□□□ -1.04
HERC2-205ENST00000564383 ZPR1O75312 459 aa8.55□□□□□ -1.04
HERC2-205ENST00000564383 PRIM1P49642 420 aaKnown RBP8.55□□□□□ -1.04
HERC2-205ENST00000564383 SPRYD7Q5W111 196 aa8.55□□□□□ -1.04
HERC2-205ENST00000564383 KSR2Q6VAB6 950 aa8.55□□□□□ -1.04
HERC2-205ENST00000564383 ANKRD44Q8N8A2 993 aa8.55□□□□□ -1.04
HERC2-205ENST00000564383 XAGE3Q8WTP9 111 aa8.55□□□□□ -1.04
HERC2-205ENST00000564383 USP21Q9UK80 565 aa8.55□□□□□ -1.04
HERC2-205ENST00000564383 MAP3K2Q9Y2U5 619 aa8.55□□□□□ -1.04
HERC2-205ENST00000564383 RNF223E7ERA6 249 aa8.54□□□□□ -1.04
HERC2-205ENST00000564383 A1BGP04217 495 aa8.54□□□□□ -1.04
HERC2-205ENST00000564383 MYL6BP14649 208 aa8.54□□□□□ -1.04
HERC2-205ENST00000564383 COPS6Q7L5N1 327 aa8.54□□□□□ -1.04
HERC2-205ENST00000564383 ZNF598Q86UK7 904 aaKnown RBP8.54□□□□□ -1.04
HERC2-205ENST00000564383 WNK3Q9BYP7 1800 aa8.54□□□□□ -1.04
HERC2-205ENST00000564383 AFF2P51816 1311 aa8.54□□□□□ -1.04
HERC2-205ENST00000564383 ERBB4Q15303 1308 aa8.54□□□□□ -1.04
HERC2-205ENST00000564383 UBR2Q8IWV8 1755 aa8.53□□□□□ -1.04
HERC2-205ENST00000564383 VIRMAQ69YN4 1812 aaKnown RBP8.53□□□□□ -1.04
HERC2-205ENST00000564383 FAM187AA6NFU0 413 aa8.53□□□□□ -1.04
HERC2-205ENST00000564383 IGKV5-2P06315 115 aa8.53□□□□□ -1.04
HERC2-205ENST00000564383 RGS3P49796 1198 aa8.53□□□□□ -1.04
HERC2-205ENST00000564383 NUCB1Q02818 461 aa8.53□□□□□ -1.04
HERC2-205ENST00000564383 AIMP1Q12904 312 aaKnown RBP8.53□□□□□ -1.04
HERC2-205ENST00000564383 NUDT18Q6ZVK8 323 aa8.53□□□□□ -1.04
HERC2-205ENST00000564383 DNAJC10Q8IXB1 793 aa8.53□□□□□ -1.04
HERC2-205ENST00000564383 SRCIN1Q9C0H9 1055 aa8.53□□□□□ -1.04
HERC2-205ENST00000564383 ATRNO75882 1429 aa8.53□□□□□ -1.04
HERC2-205ENST00000564383 KCNQ2O43526 872 aa8.52□□□□□ -1.05
HERC2-205ENST00000564383 GNAI2P04899 355 aa8.52□□□□□ -1.05
HERC2-205ENST00000564383 NBPF7P0C2Y1 421 aaPredicted RBP8.52□□□□□ -1.05
HERC2-205ENST00000564383 CWF19L2Q2TBE0 894 aaKnown RBP8.52□□□□□ -1.05
HERC2-205ENST00000564383 TTLL7Q6ZT98 887 aa8.52□□□□□ -1.05
HERC2-205ENST00000564383 RPAP2Q8IXW5 612 aaPredicted RBP8.52□□□□□ -1.05
HERC2-205ENST00000564383 VSIG10Q8N0Z9 540 aa8.52□□□□□ -1.05
HERC2-205ENST00000564383 SYTL4Q96C24 671 aaPredicted RBP8.52□□□□□ -1.05
HERC2-205ENST00000564383 ACSBG1Q96GR2 724 aa8.52□□□□□ -1.05
HERC2-205ENST00000564383 DCTPP1Q9H773 170 aa8.52□□□□□ -1.05
HERC2-205ENST00000564383 LRRFIP2Q9Y608 721 aaKnown RBP8.52□□□□□ -1.05
HERC2-205ENST00000564383 IBTKQ9P2D0 1353 aaPredicted RBP8.51□□□□□ -1.05
HERC2-205ENST00000564383 THSD7AQ9UPZ6 1657 aa8.51□□□□□ -1.05
HERC2-205ENST00000564383 PNMA6EA0A0J9YXQ4 647 aa8.51□□□□□ -1.05
HERC2-205ENST00000564383 ALDH1L1O75891 902 aa8.51□□□□□ -1.05
HERC2-205ENST00000564383 DDX58O95786 925 aaKnown RBP8.51□□□□□ -1.05
HERC2-205ENST00000564383 GNAI3P08754 354 aa8.51□□□□□ -1.05
HERC2-205ENST00000564383 CYP19A1P11511 503 aaPredicted RBP8.51□□□□□ -1.05
HERC2-205ENST00000564383 MEX3CQ5U5Q3 659 aaKnown RBP8.51□□□□□ -1.05
HERC2-205ENST00000564383 PTF1AQ7RTS3 328 aa8.51□□□□□ -1.05
HERC2-205ENST00000564383 LINS1Q8NG48 757 aa8.51□□□□□ -1.05
HERC2-205ENST00000564383 GJD4Q96KN9 370 aaPredicted RBP8.51□□□□□ -1.05
HERC2-205ENST00000564383 METTL22Q9BUU2 404 aaPredicted RBP8.51□□□□□ -1.05
HERC2-205ENST00000564383 RBM19Q9Y4C8 960 aaKnown RBP8.51□□□□□ -1.05
HERC2-205ENST00000564383 UTYO14607 1347 aa8.51□□□□□ -1.05
HERC2-205ENST00000564383 NEURL1BA8MQ27 555 aa8.5□□□□□ -1.05
HERC2-205ENST00000564383 UBTFL1P0CB47 393 aaPredicted RBP8.5□□□□□ -1.05
HERC2-205ENST00000564383 ATP8B2P98198 1209 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms