RNA–Protein interactions for RNA: ENST00000564313.1

PKD1-227, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 4

Gene PKD1, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-227ENST00000564313 F6X3S4 739 aa23.19■■□□□ 1.3
PKD1-227ENST00000564313 GCKRQ14397 625 aa23.19■■□□□ 1.3
PKD1-227ENST00000564313 BEND3Q5T5X7 828 aa23.19■■□□□ 1.3
PKD1-227ENST00000564313 SYNE4Q8N205 404 aa23.19■■□□□ 1.3
PKD1-227ENST00000564313 SLX4Q8IY92 1834 aa23.19■■□□□ 1.3
PKD1-227ENST00000564313 ALDH1L1O75891 902 aa23.18■■□□□ 1.3
PKD1-227ENST00000564313 SF3B3Q15393 1217 aaKnown RBP23.18■■□□□ 1.3
PKD1-227ENST00000564313 C21orf2O43822 256 aa23.17■■□□□ 1.3
PKD1-227ENST00000564313 PDE8AO60658 829 aa23.17■■□□□ 1.3
PKD1-227ENST00000564313 RTL5Q5HYW3 569 aaPredicted RBP23.17■■□□□ 1.3
PKD1-227ENST00000564313 C3orf67Q6ZVT6 689 aa23.17■■□□□ 1.3
PKD1-227ENST00000564313 DDX46Q7L014 1031 aaKnown RBP23.17■■□□□ 1.3
PKD1-227ENST00000564313 ZNF219Q9P2Y4 722 aaPredicted RBP23.17■■□□□ 1.3
PKD1-227ENST00000564313 SLC4A10Q6U841 1118 aa23.16■■□□□ 1.3
PKD1-227ENST00000564313 SRCIN1Q9C0H9 1055 aa23.16■■□□□ 1.3
PKD1-227ENST00000564313 H7C1W4 665 aa23.15■■□□□ 1.3
PKD1-227ENST00000564313 GRIPAP1Q4V328 841 aa23.15■■□□□ 1.3
PKD1-227ENST00000564313 CC2D2BQ6DHV5 1058 aa23.15■■□□□ 1.3
PKD1-227ENST00000564313 ARHGAP45Q92619 1136 aa23.14■■□□□ 1.29
PKD1-227ENST00000564313 API5Q9BZZ5 524 aaKnown RBP23.14■■□□□ 1.29
PKD1-227ENST00000564313 MYH3P11055 1940 aa23.14■■□□□ 1.29
PKD1-227ENST00000564313 ABCC4O15439 1325 aa23.13■■□□□ 1.29
PKD1-227ENST00000564313 BBOX1O75936 387 aa23.13■■□□□ 1.29
PKD1-227ENST00000564313 RASSF7Q02833 373 aa23.13■■□□□ 1.29
PKD1-227ENST00000564313 CCDC152Q4G0S7 254 aa23.13■■□□□ 1.29
PKD1-227ENST00000564313 CCDC93Q567U6 631 aa23.13■■□□□ 1.29
PKD1-227ENST00000564313 UBE3BQ7Z3V4 1068 aa23.13■■□□□ 1.29
PKD1-227ENST00000564313 TMC4Q7Z404 712 aa23.13■■□□□ 1.29
PKD1-227ENST00000564313 C7orf43Q8WVR3 580 aa23.13■■□□□ 1.29
PKD1-227ENST00000564313 TMX4Q9H1E5 349 aaPredicted RBP23.13■■□□□ 1.29
PKD1-227ENST00000564313 NOB1Q9ULX3 412 aaKnown RBP23.13■■□□□ 1.29
PKD1-227ENST00000564313 FER1L6Q2WGJ9 1857 aa23.13■■□□□ 1.29
PKD1-227ENST00000564313 NFKBIEO00221 500 aa23.12■■□□□ 1.29
PKD1-227ENST00000564313 PPEF1O14829 653 aaPredicted RBP23.12■■□□□ 1.29
PKD1-227ENST00000564313 IPO8O15397 1037 aaKnown RBP23.12■■□□□ 1.29
PKD1-227ENST00000564313 GRAPQ13588 217 aa23.12■■□□□ 1.29
PKD1-227ENST00000564313 RTKN2Q8IZC4 609 aa23.12■■□□□ 1.29
PKD1-227ENST00000564313 GRAPLQ8TC17 118 aaPredicted RBP23.12■■□□□ 1.29
PKD1-227ENST00000564313 PLA2G12BQ9BX93 195 aa23.12■■□□□ 1.29
PKD1-227ENST00000564313 LTBP3Q9NS15 1303 aa23.11■■□□□ 1.29
PKD1-227ENST00000564313 SLC34A2O95436 690 aa23.11■■□□□ 1.29
PKD1-227ENST00000564313 VEGFAP15692 232 aaPredicted RBP23.11■■□□□ 1.29
PKD1-227ENST00000564313 ZC3H4Q9UPT8 1303 aaKnown RBP23.1■■□□□ 1.29
PKD1-227ENST00000564313 GRM8O00222 908 aa23.1■■□□□ 1.29
PKD1-227ENST00000564313 CTSWP56202 376 aa23.1■■□□□ 1.29
PKD1-227ENST00000564313 C9orf78Q9NZ63 289 aaPredicted RBP23.1■■□□□ 1.29
PKD1-227ENST00000564313 GLTPD2A6NH11 291 aa23.09■■□□□ 1.29
PKD1-227ENST00000564313 CCT4P50991 539 aaKnown RBP23.09■■□□□ 1.29
PKD1-227ENST00000564313 CASP7P55210 303 aa23.09■■□□□ 1.29
PKD1-227ENST00000564313 JARID2Q92833 1246 aaPredicted RBP23.09■■□□□ 1.29
PKD1-227ENST00000564313 TAOK3Q9H2K8 898 aa23.09■■□□□ 1.29
PKD1-227ENST00000564313 LMNB1P20700 586 aa23.08■■□□□ 1.29
PKD1-227ENST00000564313 ATP6V0A2Q9Y487 856 aa23.08■■□□□ 1.29
PKD1-227ENST00000564313 RTL9Q8NET4 1388 aa23.08■■□□□ 1.29
PKD1-227ENST00000564313 OLFM4Q6UX06 510 aa23.07■■□□□ 1.28
PKD1-227ENST00000564313 UTYO14607 1347 aa23.07■■□□□ 1.28
PKD1-227ENST00000564313 BCAR3O75815 825 aa23.06■■□□□ 1.28
PKD1-227ENST00000564313 FKBP4Q02790 459 aaKnown RBP eCLIP23.06■■□□□ 1.28
PKD1-227ENST00000564313 SP8Q8IXZ3 490 aa23.06■■□□□ 1.28
PKD1-227ENST00000564313 TTLL11Q8NHH1 800 aa23.06■■□□□ 1.28
PKD1-227ENST00000564313 CCDC88AQ3V6T2 1871 aa23.05■■□□□ 1.28
PKD1-227ENST00000564313 ATF7IPQ6VMQ6 1270 aa23.05■■□□□ 1.28
PKD1-227ENST00000564313 CDC5LQ99459 802 aaKnown RBP23.05■■□□□ 1.28
PKD1-227ENST00000564313 PSMD1Q99460 953 aa23.05■■□□□ 1.28
PKD1-227ENST00000564313 RPS8P62241 208 aaKnown RBP23.04■■□□□ 1.28
PKD1-227ENST00000564313 ZKSCAN2Q63HK3 967 aa23.04■■□□□ 1.28
PKD1-227ENST00000564313 FRAT1Q92837 279 aaPredicted RBP23.04■■□□□ 1.28
PKD1-227ENST00000564313 SNED1Q8TER0 1413 aa23.04■■□□□ 1.28
PKD1-227ENST00000564313 LRRC37AA6NMS7 1700 aa23.04■■□□□ 1.28
PKD1-227ENST00000564313 POTECB2RU33 542 aa23.03■■□□□ 1.28
PKD1-227ENST00000564313 CSF1RP07333 972 aa23.03■■□□□ 1.28
PKD1-227ENST00000564313 CELF1Q92879 486 aaKnown RBP23.03■■□□□ 1.28
PKD1-227ENST00000564313 TAF1P21675 1872 aa23.02■■□□□ 1.28
PKD1-227ENST00000564313 TRIM27P14373 513 aa23.02■■□□□ 1.28
PKD1-227ENST00000564313 ANKRD18AQ8IVF6 992 aa23.02■■□□□ 1.28
PKD1-227ENST00000564313 MKRN1Q9UHC7 482 aaKnown RBP23.02■■□□□ 1.28
PKD1-227ENST00000564313 HDAC5Q9UQL6 1122 aa23.02■■□□□ 1.28
PKD1-227ENST00000564313 DICER1Q9UPY3 1922 aaKnown RBP23.02■■□□□ 1.28
PKD1-227ENST00000564313 INTS3Q68E01 1043 aaKnown RBP23.01■■□□□ 1.27
PKD1-227ENST00000564313 SUPT20HQ8NEM7 779 aa23.01■■□□□ 1.27
PKD1-227ENST00000564313 GREM2Q9H772 168 aa23.01■■□□□ 1.27
PKD1-227ENST00000564313 SEC31BQ9NQW1 1179 aa23.01■■□□□ 1.27
PKD1-227ENST00000564313 TIAM2Q8IVF5 1701 aa23.01■■□□□ 1.27
PKD1-227ENST00000564313 FOXN1O15353 648 aa23■■□□□ 1.27
PKD1-227ENST00000564313 NBPF7P0C2Y1 421 aaPredicted RBP23■■□□□ 1.27
PKD1-227ENST00000564313 FOXO4P98177 505 aa23■■□□□ 1.27
PKD1-227ENST00000564313 SLC51AQ86UW1 340 aa23■■□□□ 1.27
PKD1-227ENST00000564313 CCDC85AQ96PX6 553 aaPredicted RBP23■■□□□ 1.27
PKD1-227ENST00000564313 VPS33BQ9H267 617 aa23■■□□□ 1.27
PKD1-227ENST00000564313 ITGA6P23229 1130 aa22.99■■□□□ 1.27
PKD1-227ENST00000564313 USP44Q9H0E7 712 aa22.99■■□□□ 1.27
PKD1-227ENST00000564313 IGHMBP2P38935 993 aaKnown RBP22.98■■□□□ 1.27
PKD1-227ENST00000564313 DPP8Q6V1X1 898 aaPredicted RBP22.98■■□□□ 1.27
PKD1-227ENST00000564313 MPNDQ8N594 471 aa22.98■■□□□ 1.27
PKD1-227ENST00000564313 YTHDC1Q96MU7 727 aaKnown RBP22.98■■□□□ 1.27
PKD1-227ENST00000564313 RTFDC1Q9BY42 306 aaPredicted RBP22.98■■□□□ 1.27
PKD1-227ENST00000564313 ZNF277Q9NRM2 450 aaPredicted RBP22.98■■□□□ 1.27
PKD1-227ENST00000564313 CREBZFQ9NS37 354 aa22.98■■□□□ 1.27
PKD1-227ENST00000564313 ANKRD18BA2A2Z9 1011 aa22.97■■□□□ 1.27
PKD1-227ENST00000564313 IFIT5Q13325 482 aaKnown RBP22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms