RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 FAM89AQ96GI7 184 aa12.34□□□□□ -0.43
CLN6-203ENST00000563917 ABT1Q9ULW3 272 aaKnown RBP12.34□□□□□ -0.43
CLN6-203ENST00000563917 SNED1Q8TER0 1413 aa12.34□□□□□ -0.43
CLN6-203ENST00000563917 PASKQ96RG2 1323 aa12.34□□□□□ -0.43
CLN6-203ENST00000563917 ELL2O00472 640 aaPredicted RBP12.33□□□□□ -0.44
CLN6-203ENST00000563917 ITGBL1O95965 494 aaPredicted RBP12.33□□□□□ -0.44
CLN6-203ENST00000563917 CCDC30Q5VVM6 783 aa12.33□□□□□ -0.44
CLN6-203ENST00000563917 CIAPIN1Q6FI81 312 aa12.33□□□□□ -0.44
CLN6-203ENST00000563917 ISCA1Q9BUE6 129 aa12.33□□□□□ -0.44
CLN6-203ENST00000563917 RTFDC1Q9BY42 306 aaPredicted RBP12.33□□□□□ -0.44
CLN6-203ENST00000563917 ADARB2Q9NS39 739 aaKnown RBP12.33□□□□□ -0.44
CLN6-203ENST00000563917 CNTNAP1P78357 1384 aa12.32□□□□□ -0.44
CLN6-203ENST00000563917 G3V3G9 751 aa12.32□□□□□ -0.44
CLN6-203ENST00000563917 IRS4O14654 1257 aaPredicted RBP12.32□□□□□ -0.44
CLN6-203ENST00000563917 ZEB1P37275 1124 aaPredicted RBP12.32□□□□□ -0.44
CLN6-203ENST00000563917 EPS15P42566 896 aa12.32□□□□□ -0.44
CLN6-203ENST00000563917 SCNN1DP51172 638 aa12.32□□□□□ -0.44
CLN6-203ENST00000563917 KIAA2012Q0VF49 1180 aa12.32□□□□□ -0.44
CLN6-203ENST00000563917 TRIM28Q13263 835 aaKnown RBP12.32□□□□□ -0.44
CLN6-203ENST00000563917 DEFB115Q30KQ5 88 aa12.32□□□□□ -0.44
CLN6-203ENST00000563917 RTL5Q5HYW3 569 aaPredicted RBP12.32□□□□□ -0.44
CLN6-203ENST00000563917 DCAF8Q5TAQ9 597 aa12.32□□□□□ -0.44
CLN6-203ENST00000563917 COL13A1Q5TAT6 717 aaPredicted RBP12.32□□□□□ -0.44
CLN6-203ENST00000563917 PAXIP1Q6ZW49 1069 aaPredicted RBP12.32□□□□□ -0.44
CLN6-203ENST00000563917 ZNF428Q96B54 188 aa12.32□□□□□ -0.44
CLN6-203ENST00000563917 EYA3Q99504 573 aa12.32□□□□□ -0.44
CLN6-203ENST00000563917 NSFL1CQ9UNZ2 370 aaKnown RBP12.32□□□□□ -0.44
CLN6-203ENST00000563917 C6orf229H3BNL8 230 aa12.31□□□□□ -0.44
CLN6-203ENST00000563917 ZNF853P0CG23 659 aa12.31□□□□□ -0.44
CLN6-203ENST00000563917 CXCL9Q07325 125 aa12.31□□□□□ -0.44
CLN6-203ENST00000563917 SF3B3Q15393 1217 aaKnown RBP12.31□□□□□ -0.44
CLN6-203ENST00000563917 WASHC4Q2M389 1173 aa12.31□□□□□ -0.44
CLN6-203ENST00000563917 STK31Q9BXU1 1019 aa12.31□□□□□ -0.44
CLN6-203ENST00000563917 GPRC5DQ9NZD1 345 aa12.31□□□□□ -0.44
CLN6-203ENST00000563917 CDHR2Q9BYE9 1310 aa12.31□□□□□ -0.44
CLN6-203ENST00000563917 H7C1D1 291 aa12.3□□□□□ -0.44
CLN6-203ENST00000563917 RAD17O75943 681 aa12.3□□□□□ -0.44
CLN6-203ENST00000563917 ZBTB38Q8NAP3 1195 aaPredicted RBP12.3□□□□□ -0.44
CLN6-203ENST00000563917 CCDC191Q8NCU4 936 aa12.3□□□□□ -0.44
CLN6-203ENST00000563917 MYD88Q99836 296 aa12.3□□□□□ -0.44
CLN6-203ENST00000563917 LAMB2P55268 1798 aa12.29□□□□□ -0.44
CLN6-203ENST00000563917 ECE1P42892 770 aa12.29□□□□□ -0.44
CLN6-203ENST00000563917 VEGFBP49765 207 aa12.29□□□□□ -0.44
CLN6-203ENST00000563917 GMPSP49915 693 aaPredicted RBP12.29□□□□□ -0.44
CLN6-203ENST00000563917 RPS8P62241 208 aaKnown RBP12.29□□□□□ -0.44
CLN6-203ENST00000563917 NEXNQ0ZGT2 675 aa12.29□□□□□ -0.44
CLN6-203ENST00000563917 CCDC152Q4G0S7 254 aa12.29□□□□□ -0.44
CLN6-203ENST00000563917 BEGAINQ9BUH8 593 aa12.29□□□□□ -0.44
CLN6-203ENST00000563917 ZC3H12CQ9C0D7 883 aaKnown RBP12.29□□□□□ -0.44
CLN6-203ENST00000563917 CWC25Q9NXE8 425 aaPredicted RBP12.29□□□□□ -0.44
CLN6-203ENST00000563917 RASSF10A6NK89 507 aa12.28□□□□□ -0.44
CLN6-203ENST00000563917 CTCFP49711 727 aaPredicted RBP12.28□□□□□ -0.44
CLN6-203ENST00000563917 MAP2K1Q02750 393 aaPredicted RBP12.28□□□□□ -0.44
CLN6-203ENST00000563917 CELF1Q92879 486 aaKnown RBP12.28□□□□□ -0.44
CLN6-203ENST00000563917 PHAXQ9H814 394 aaKnown RBP12.28□□□□□ -0.44
CLN6-203ENST00000563917 ANKIB1Q9P2G1 1089 aa12.28□□□□□ -0.44
CLN6-203ENST00000563917 COL4A5P29400 1685 aa12.28□□□□□ -0.44
CLN6-203ENST00000563917 ADAMTSL1Q8N6G6 1762 aa12.28□□□□□ -0.44
CLN6-203ENST00000563917 RIMBP2O15034 1052 aa12.27□□□□□ -0.45
CLN6-203ENST00000563917 ANP32CO43423 234 aa12.27□□□□□ -0.45
CLN6-203ENST00000563917 CAPN15O75808 1086 aa12.27□□□□□ -0.45
CLN6-203ENST00000563917 PCCAP05165 728 aaPredicted RBP12.27□□□□□ -0.45
CLN6-203ENST00000563917 SLC51AQ86UW1 340 aa12.27□□□□□ -0.45
CLN6-203ENST00000563917 C8orf58Q8NAV2 365 aa12.27□□□□□ -0.45
CLN6-203ENST00000563917 ZC3H15Q8WU90 426 aaKnown RBP12.27□□□□□ -0.45
CLN6-203ENST00000563917 METTL22Q9BUU2 404 aaPredicted RBP12.27□□□□□ -0.45
CLN6-203ENST00000563917 CNOT7Q9UIV1 285 aaKnown RBP12.27□□□□□ -0.45
CLN6-203ENST00000563917 WDR33Q9C0J8 1336 aaKnown RBP12.27□□□□□ -0.45
CLN6-203ENST00000563917 PDE8AO60658 829 aa12.26□□□□□ -0.45
CLN6-203ENST00000563917 GRM1Q13255 1194 aa12.26□□□□□ -0.45
CLN6-203ENST00000563917 CCDC27Q2M243 656 aa12.26□□□□□ -0.45
CLN6-203ENST00000563917 DBNDD1Q9H9R9 158 aa12.26□□□□□ -0.45
CLN6-203ENST00000563917 MAP3K2Q9Y2U5 619 aa12.26□□□□□ -0.45
CLN6-203ENST00000563917 DDX60Q8IY21 1712 aaKnown RBP12.25□□□□□ -0.45
CLN6-203ENST00000563917 FOXN1O15353 648 aa12.25□□□□□ -0.45
CLN6-203ENST00000563917 RPS12P25398 132 aaKnown RBP12.25□□□□□ -0.45
CLN6-203ENST00000563917 GPSM2P81274 684 aa12.25□□□□□ -0.45
CLN6-203ENST00000563917 KSR2Q6VAB6 950 aa12.25□□□□□ -0.45
CLN6-203ENST00000563917 CDC37L1Q7L3B6 337 aa12.25□□□□□ -0.45
CLN6-203ENST00000563917 ANKRD18AQ8IVF6 992 aa12.25□□□□□ -0.45
CLN6-203ENST00000563917 MICALL2Q8IY33 904 aa12.25□□□□□ -0.45
CLN6-203ENST00000563917 DPF2Q92785 391 aa12.25□□□□□ -0.45
CLN6-203ENST00000563917 CDC5LQ99459 802 aaKnown RBP12.25□□□□□ -0.45
CLN6-203ENST00000563917 ZNF408Q9H9D4 720 aa12.25□□□□□ -0.45
CLN6-203ENST00000563917 MRS2Q9HD23 443 aa12.25□□□□□ -0.45
CLN6-203ENST00000563917 PRDM10Q9NQV6 1147 aa12.25□□□□□ -0.45
CLN6-203ENST00000563917 GGA1Q9UJY5 639 aa12.25□□□□□ -0.45
CLN6-203ENST00000563917 PI4KAP2A4QPH2 592 aa12.24□□□□□ -0.45
CLN6-203ENST00000563917 TRAF5O00463 557 aa12.24□□□□□ -0.45
CLN6-203ENST00000563917 PSMD14O00487 310 aa12.24□□□□□ -0.45
CLN6-203ENST00000563917 ECE2O60344 883 aa12.24□□□□□ -0.45
CLN6-203ENST00000563917 UFL1O94874 794 aa12.24□□□□□ -0.45
CLN6-203ENST00000563917 CELF2O95319 508 aaKnown RBP12.24□□□□□ -0.45
CLN6-203ENST00000563917 LTBP1Q14766 1721 aa12.24□□□□□ -0.45
CLN6-203ENST00000563917 DOK7Q18PE1 504 aa12.24□□□□□ -0.45
CLN6-203ENST00000563917 TWISTNBQ3B726 338 aaPredicted RBP12.24□□□□□ -0.45
CLN6-203ENST00000563917 PI4KAP1Q8N8J0 262 aa12.24□□□□□ -0.45
CLN6-203ENST00000563917 TBC1D16Q8TBP0 767 aa12.24□□□□□ -0.45
CLN6-203ENST00000563917 TSR2Q969E8 191 aaKnown RBP12.24□□□□□ -0.45
CLN6-203ENST00000563917 CAPNS2Q96L46 248 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms