RNA–Protein interactions for RNA: ENST00000563835.1

PTPN9-203, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 338 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-203ENST00000563835 FSTL1Q12841 308 aa11.86□□□□□ -0.51
PTPN9-203ENST00000563835 TRIM28Q13263 835 aaKnown RBP11.86□□□□□ -0.51
PTPN9-203ENST00000563835 AOC3Q16853 763 aa11.86□□□□□ -0.51
PTPN9-203ENST00000563835 CWF19L2Q2TBE0 894 aaKnown RBP11.86□□□□□ -0.51
PTPN9-203ENST00000563835 PI4KAP1Q8N8J0 262 aa11.86□□□□□ -0.51
PTPN9-203ENST00000563835 ZBTB38Q8NAP3 1195 aaPredicted RBP11.86□□□□□ -0.51
PTPN9-203ENST00000563835 SMC1BQ8NDV3 1235 aa11.86□□□□□ -0.51
PTPN9-203ENST00000563835 L3MBTL3Q96JM7 780 aaPredicted RBP11.86□□□□□ -0.51
PTPN9-203ENST00000563835 METTL22Q9BUU2 404 aaPredicted RBP11.86□□□□□ -0.51
PTPN9-203ENST00000563835 ZNF521Q96K83 1311 aa11.86□□□□□ -0.51
PTPN9-203ENST00000563835 A0A1B0GUL6 1792 aa11.85□□□□□ -0.51
PTPN9-203ENST00000563835 PPIP5K2O43314 1243 aa11.85□□□□□ -0.51
PTPN9-203ENST00000563835 SLC4A2P04920 1241 aa11.85□□□□□ -0.51
PTPN9-203ENST00000563835 SF3B3Q15393 1217 aaKnown RBP11.85□□□□□ -0.51
PTPN9-203ENST00000563835 KSR2Q6VAB6 950 aa11.85□□□□□ -0.51
PTPN9-203ENST00000563835 LARGE2Q8N3Y3 721 aa11.85□□□□□ -0.51
PTPN9-203ENST00000563835 CCDC191Q8NCU4 936 aa11.85□□□□□ -0.51
PTPN9-203ENST00000563835 CCDC85AQ96PX6 553 aaPredicted RBP11.85□□□□□ -0.51
PTPN9-203ENST00000563835 CWC25Q9NXE8 425 aaPredicted RBP11.85□□□□□ -0.51
PTPN9-203ENST00000563835 VAMP4O75379 141 aa11.84□□□□□ -0.51
PTPN9-203ENST00000563835 PCCAP05165 728 aaPredicted RBP11.84□□□□□ -0.51
PTPN9-203ENST00000563835 APLP1P51693 650 aa11.84□□□□□ -0.51
PTPN9-203ENST00000563835 FLIIQ13045 1269 aa11.84□□□□□ -0.51
PTPN9-203ENST00000563835 DPP8Q6V1X1 898 aaPredicted RBP11.84□□□□□ -0.51
PTPN9-203ENST00000563835 SP8Q8IXZ3 490 aa11.84□□□□□ -0.51
PTPN9-203ENST00000563835 JDP2Q8WYK2 163 aa11.84□□□□□ -0.51
PTPN9-203ENST00000563835 TAF1DQ9H5J8 278 aaPredicted RBP11.84□□□□□ -0.51
PTPN9-203ENST00000563835 SEC31BQ9NQW1 1179 aa11.84□□□□□ -0.51
PTPN9-203ENST00000563835 SCN9AQ15858 1988 aa11.83□□□□□ -0.52
PTPN9-203ENST00000563835 NEURL1BA8MQ27 555 aa11.83□□□□□ -0.52
PTPN9-203ENST00000563835 BBOX1O75936 387 aa11.83□□□□□ -0.52
PTPN9-203ENST00000563835 FKBP5Q13451 457 aaPredicted RBP11.83□□□□□ -0.52
PTPN9-203ENST00000563835 NIM1KQ8IY84 436 aa11.83□□□□□ -0.52
PTPN9-203ENST00000563835 MPNDQ8N594 471 aa11.83□□□□□ -0.52
PTPN9-203ENST00000563835 GPR101Q96P66 508 aaPredicted RBP11.83□□□□□ -0.52
PTPN9-203ENST00000563835 RTFDC1Q9BY42 306 aaPredicted RBP11.83□□□□□ -0.52
PTPN9-203ENST00000563835 GJA3Q9Y6H8 435 aa11.83□□□□□ -0.52
PTPN9-203ENST00000563835 CDHR2Q9BYE9 1310 aa11.83□□□□□ -0.52
PTPN9-203ENST00000563835 ZNF646O15015 1829 aaPredicted RBP11.82□□□□□ -0.52
PTPN9-203ENST00000563835 PSME4Q14997 1843 aa11.82□□□□□ -0.52
PTPN9-203ENST00000563835 IQCA1LA6NCM1 817 aa11.82□□□□□ -0.52
PTPN9-203ENST00000563835 PDE8AO60658 829 aa11.82□□□□□ -0.52
PTPN9-203ENST00000563835 SCNN1DP51172 638 aa11.82□□□□□ -0.52
PTPN9-203ENST00000563835 GPSM2P81274 684 aa11.82□□□□□ -0.52
PTPN9-203ENST00000563835 GRIPAP1Q4V328 841 aa11.82□□□□□ -0.52
PTPN9-203ENST00000563835 GPC2Q8N158 579 aa11.82□□□□□ -0.52
PTPN9-203ENST00000563835 TMX4Q9H1E5 349 aaPredicted RBP11.82□□□□□ -0.52
PTPN9-203ENST00000563835 F6X3S4 739 aa11.81□□□□□ -0.52
PTPN9-203ENST00000563835 CTSWP56202 376 aa11.81□□□□□ -0.52
PTPN9-203ENST00000563835 EIF6P56537 245 aaKnown RBP11.81□□□□□ -0.52
PTPN9-203ENST00000563835 KIAA2012Q0VF49 1180 aa11.81□□□□□ -0.52
PTPN9-203ENST00000563835 NEXNQ0ZGT2 675 aa11.81□□□□□ -0.52
PTPN9-203ENST00000563835 EAPPQ56P03 285 aaPredicted RBP11.81□□□□□ -0.52
PTPN9-203ENST00000563835 CHADLQ6NUI6 762 aa11.81□□□□□ -0.52
PTPN9-203ENST00000563835 UBE3BQ7Z3V4 1068 aa11.81□□□□□ -0.52
PTPN9-203ENST00000563835 CHMP4AQ9BY43 222 aa11.81□□□□□ -0.52
PTPN9-203ENST00000563835 MYH16Q9H6N6 1097 aa11.81□□□□□ -0.52
PTPN9-203ENST00000563835 HACL1Q9UJ83 578 aa11.81□□□□□ -0.52
PTPN9-203ENST00000563835 YDJCA8MPS7 323 aa11.8□□□□□ -0.52
PTPN9-203ENST00000563835 EPHX2P34913 555 aa11.8□□□□□ -0.52
PTPN9-203ENST00000563835 CCDC152Q4G0S7 254 aa11.8□□□□□ -0.52
PTPN9-203ENST00000563835 TMC4Q7Z404 712 aa11.8□□□□□ -0.52
PTPN9-203ENST00000563835 DNAJC5GQ8N7S2 189 aa11.8□□□□□ -0.52
PTPN9-203ENST00000563835 SUPT20HQ8NEM7 779 aa11.8□□□□□ -0.52
PTPN9-203ENST00000563835 DNAAF4Q8WXU2 420 aa11.8□□□□□ -0.52
PTPN9-203ENST00000563835 POLLQ9UGP5 575 aa11.8□□□□□ -0.52
PTPN9-203ENST00000563835 NSFL1CQ9UNZ2 370 aaKnown RBP11.8□□□□□ -0.52
PTPN9-203ENST00000563835 RAD17O75943 681 aa11.79□□□□□ -0.52
PTPN9-203ENST00000563835 EPS15P42566 896 aa11.79□□□□□ -0.52
PTPN9-203ENST00000563835 CASP7P55210 303 aa11.79□□□□□ -0.52
PTPN9-203ENST00000563835 RPS8P62241 208 aaKnown RBP11.79□□□□□ -0.52
PTPN9-203ENST00000563835 CXCL9Q07325 125 aa11.79□□□□□ -0.52
PTPN9-203ENST00000563835 GCKRQ14397 625 aa11.79□□□□□ -0.52
PTPN9-203ENST00000563835 LDHDQ86WU2 507 aa11.79□□□□□ -0.52
PTPN9-203ENST00000563835 GREM2Q9H772 168 aa11.79□□□□□ -0.52
PTPN9-203ENST00000563835 DBNDD1Q9H9R9 158 aa11.79□□□□□ -0.52
PTPN9-203ENST00000563835 ZNRF3Q9ULT6 936 aa11.79□□□□□ -0.52
PTPN9-203ENST00000563835 SHTN1A0MZ66 631 aa11.78□□□□□ -0.52
PTPN9-203ENST00000563835 C6orf229H3BNL8 230 aa11.78□□□□□ -0.52
PTPN9-203ENST00000563835 H7C1W4 665 aa11.78□□□□□ -0.52
PTPN9-203ENST00000563835 RIMBP2O15034 1052 aa11.78□□□□□ -0.52
PTPN9-203ENST00000563835 MAP1SQ66K74 1059 aaPredicted RBP11.78□□□□□ -0.52
PTPN9-203ENST00000563835 TTLL11Q8NHH1 800 aa11.78□□□□□ -0.52
PTPN9-203ENST00000563835 TBC1D16Q8TBP0 767 aa11.78□□□□□ -0.52
PTPN9-203ENST00000563835 PCNTO95613 3336 aa11.77□□□□□ -0.52
PTPN9-203ENST00000563835 TRPM7Q96QT4 1865 aa11.77□□□□□ -0.53
PTPN9-203ENST00000563835 WTIPA6NIX2 430 aaPredicted RBP11.77□□□□□ -0.53
PTPN9-203ENST00000563835 UFL1O94874 794 aa11.77□□□□□ -0.53
PTPN9-203ENST00000563835 LMOD1P29536 600 aaPredicted RBP11.77□□□□□ -0.53
PTPN9-203ENST00000563835 GMPSP49915 693 aaPredicted RBP11.77□□□□□ -0.53
PTPN9-203ENST00000563835 DOK7Q18PE1 504 aa11.77□□□□□ -0.53
PTPN9-203ENST00000563835 WASHC4Q2M389 1173 aa11.77□□□□□ -0.53
PTPN9-203ENST00000563835 FAM161AQ3B820 660 aa11.77□□□□□ -0.53
PTPN9-203ENST00000563835 ANKRD18AQ8IVF6 992 aa11.77□□□□□ -0.53
PTPN9-203ENST00000563835 LINS1Q8NG48 757 aa11.77□□□□□ -0.53
PTPN9-203ENST00000563835 CDCA7LQ96GN5 454 aa11.77□□□□□ -0.53
PTPN9-203ENST00000563835 VPS33BQ9H267 617 aa11.77□□□□□ -0.53
PTPN9-203ENST00000563835 CLEC11AQ9Y240 323 aa11.77□□□□□ -0.53
PTPN9-203ENST00000563835 PASKQ96RG2 1323 aa11.77□□□□□ -0.53
PTPN9-203ENST00000563835 RTL9Q8NET4 1388 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms