RNA–Protein interactions for RNA: ENST00000563629.1

CYLD-205, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 2

Gene CYLD, Length 2,568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-205ENST00000563629 MTX1Q13505 466 aa9.27□□□□□ -0.92
CYLD-205ENST00000563629 FNBP4Q8N3X1 1017 aaPredicted RBP9.27□□□□□ -0.92
CYLD-205ENST00000563629 SLC4A9Q96Q91 983 aa9.27□□□□□ -0.92
CYLD-205ENST00000563629 QTRT2Q9H974 415 aaKnown RBP9.27□□□□□ -0.92
CYLD-205ENST00000563629 CCDC171Q6TFL3 1326 aa9.27□□□□□ -0.93
CYLD-205ENST00000563629 AFDNP55196 1824 aaKnown RBP9.27□□□□□ -0.93
CYLD-205ENST00000563629 MSNP26038 577 aaKnown RBP9.27□□□□□ -0.93
CYLD-205ENST00000563629 GCKRQ14397 625 aa9.27□□□□□ -0.93
CYLD-205ENST00000563629 LRSAM1Q6UWE0 723 aa9.27□□□□□ -0.93
CYLD-205ENST00000563629 FERMT3Q86UX7 667 aa9.27□□□□□ -0.93
CYLD-205ENST00000563629 DNAJC10Q8IXB1 793 aa9.27□□□□□ -0.93
CYLD-205ENST00000563629 EVI5LQ96CN4 794 aa9.27□□□□□ -0.93
CYLD-205ENST00000563629 ATG3Q9NT62 314 aa9.27□□□□□ -0.93
CYLD-205ENST00000563629 SLIT2O94813 1529 aa9.26□□□□□ -0.93
CYLD-205ENST00000563629 STX6O43752 255 aa9.26□□□□□ -0.93
CYLD-205ENST00000563629 MBD3O95983 291 aa9.26□□□□□ -0.93
CYLD-205ENST00000563629 ZNF589Q86UQ0 364 aaPredicted RBP9.26□□□□□ -0.93
CYLD-205ENST00000563629 FMNL2Q96PY5 1086 aa9.26□□□□□ -0.93
CYLD-205ENST00000563629 CYP46A1Q9Y6A2 500 aa9.26□□□□□ -0.93
CYLD-205ENST00000563629 HEG1Q9ULI3 1381 aa9.26□□□□□ -0.93
CYLD-205ENST00000563629 NBPF26B4DH59 902 aa9.26□□□□□ -0.93
CYLD-205ENST00000563629 TFCP2Q12800 502 aa9.26□□□□□ -0.93
CYLD-205ENST00000563629 NBPF14Q5TI25 921 aa9.26□□□□□ -0.93
CYLD-205ENST00000563629 CREB3L3Q68CJ9 461 aa9.26□□□□□ -0.93
CYLD-205ENST00000563629 NBPF10Q6P3W6 841 aaKnown RBP9.26□□□□□ -0.93
CYLD-205ENST00000563629 CCDC129Q6ZRS4 1044 aa9.26□□□□□ -0.93
CYLD-205ENST00000563629 ANKRD13DQ6ZTN6 518 aa9.26□□□□□ -0.93
CYLD-205ENST00000563629 NBPF15Q8N660 670 aa9.26□□□□□ -0.93
CYLD-205ENST00000563629 SCN11AQ9UI33 1791 aa9.26□□□□□ -0.93
CYLD-205ENST00000563629 SNRPA1P09661 255 aaKnown RBP9.25□□□□□ -0.93
CYLD-205ENST00000563629 ZSCAN22P10073 491 aaPredicted RBP9.25□□□□□ -0.93
CYLD-205ENST00000563629 ZKSCAN1P17029 563 aaPredicted RBP9.25□□□□□ -0.93
CYLD-205ENST00000563629 NKX1-1Q15270 411 aaPredicted RBP9.25□□□□□ -0.93
CYLD-205ENST00000563629 ME3Q16798 604 aa9.25□□□□□ -0.93
CYLD-205ENST00000563629 SLFNL1Q499Z3 407 aa9.25□□□□□ -0.93
CYLD-205ENST00000563629 FAM173BQ6P4H8 233 aa9.25□□□□□ -0.93
CYLD-205ENST00000563629 GJD4Q96KN9 370 aaPredicted RBP9.25□□□□□ -0.93
CYLD-205ENST00000563629 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.25□□□□□ -0.93
CYLD-205ENST00000563629 A0A087WZG4 1122 aa9.25□□□□□ -0.93
CYLD-205ENST00000563629 ERVV-2B6SEH9 535 aa9.25□□□□□ -0.93
CYLD-205ENST00000563629 PLCB2Q00722 1185 aa9.25□□□□□ -0.93
CYLD-205ENST00000563629 DNM1Q05193 864 aaKnown RBP9.25□□□□□ -0.93
CYLD-205ENST00000563629 VPS72Q15906 364 aa9.25□□□□□ -0.93
CYLD-205ENST00000563629 TTLL7Q6ZT98 887 aa9.25□□□□□ -0.93
CYLD-205ENST00000563629 DDX46Q7L014 1031 aaKnown RBP9.25□□□□□ -0.93
CYLD-205ENST00000563629 PPP1R9BQ96SB3 815 aa9.25□□□□□ -0.93
CYLD-205ENST00000563629 SEC62Q99442 399 aaKnown RBP9.25□□□□□ -0.93
CYLD-205ENST00000563629 USP42Q9H9J4 1324 aaKnown RBP9.25□□□□□ -0.93
CYLD-205ENST00000563629 PPFIA3O75145 1194 aa9.24□□□□□ -0.93
CYLD-205ENST00000563629 F13A1P00488 732 aa9.24□□□□□ -0.93
CYLD-205ENST00000563629 FOSBP53539 338 aa9.24□□□□□ -0.93
CYLD-205ENST00000563629 ST3GAL1Q11201 340 aa9.24□□□□□ -0.93
CYLD-205ENST00000563629 CCDC85AQ96PX6 553 aaPredicted RBP9.24□□□□□ -0.93
CYLD-205ENST00000563629 METTL22Q9BUU2 404 aaPredicted RBP9.24□□□□□ -0.93
CYLD-205ENST00000563629 TSPY26PQ9H489 355 aa9.24□□□□□ -0.93
CYLD-205ENST00000563629 ZBTB3Q9H5J0 574 aa9.24□□□□□ -0.93
CYLD-205ENST00000563629 TPCN1Q9ULQ1 816 aa9.24□□□□□ -0.93
CYLD-205ENST00000563629 COL14A1Q05707 1796 aaKnown RBP9.24□□□□□ -0.93
CYLD-205ENST00000563629 SPATA31A6Q5VVP1 1343 aa9.24□□□□□ -0.93
CYLD-205ENST00000563629 DISP2A7MBM2 1401 aa9.24□□□□□ -0.93
CYLD-205ENST00000563629 SLC27A2O14975 620 aa9.24□□□□□ -0.93
CYLD-205ENST00000563629 SEPT12Q8IYM1 358 aa9.24□□□□□ -0.93
CYLD-205ENST00000563629 NEUROD6Q96NK8 337 aa9.24□□□□□ -0.93
CYLD-205ENST00000563629 DBNLQ9UJU6 430 aaKnown RBP9.24□□□□□ -0.93
CYLD-205ENST00000563629 COL22A1Q8NFW1 1626 aaPredicted RBP9.23□□□□□ -0.93
CYLD-205ENST00000563629 PTMAP06454 111 aaKnown RBP9.23□□□□□ -0.93
CYLD-205ENST00000563629 NECTIN1Q15223 517 aa9.23□□□□□ -0.93
CYLD-205ENST00000563629 ZSCAN30Q86W11 494 aa9.23□□□□□ -0.93
CYLD-205ENST00000563629 SYAP1Q96A49 352 aaPredicted RBP9.23□□□□□ -0.93
CYLD-205ENST00000563629 DBNDD2Q9BQY9 259 aa9.23□□□□□ -0.93
CYLD-205ENST00000563629 LRRC2Q9BYS8 371 aa9.23□□□□□ -0.93
CYLD-205ENST00000563629 HDAC5Q9UQL6 1122 aa9.23□□□□□ -0.93
CYLD-205ENST00000563629 PLCH1Q4KWH8 1693 aa9.23□□□□□ -0.93
CYLD-205ENST00000563629 VPS53Q5VIR6 699 aa9.23□□□□□ -0.93
CYLD-205ENST00000563629 ZSWIM6Q9HCJ5 1215 aa9.23□□□□□ -0.93
CYLD-205ENST00000563629 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.22□□□□□ -0.93
CYLD-205ENST00000563629 HCLS1P14317 486 aaPredicted RBP9.22□□□□□ -0.93
CYLD-205ENST00000563629 TNNI3KQ59H18 835 aa9.22□□□□□ -0.93
CYLD-205ENST00000563629 BLOC1S2Q6QNY1 142 aa9.22□□□□□ -0.93
CYLD-205ENST00000563629 LMBR1LQ6UX01 489 aa9.22□□□□□ -0.93
CYLD-205ENST00000563629 CDC37L1Q7L3B6 337 aa9.22□□□□□ -0.93
CYLD-205ENST00000563629 FPGT-TNNI3KV9GXZ4 949 aa9.22□□□□□ -0.93
CYLD-205ENST00000563629 ARFGEF2Q9Y6D5 1785 aa9.22□□□□□ -0.93
CYLD-205ENST00000563629 HSP90B1P14625 803 aaKnown RBP9.22□□□□□ -0.93
CYLD-205ENST00000563629 PTPN12Q05209 780 aaKnown RBP9.22□□□□□ -0.93
CYLD-205ENST00000563629 GIMAP6Q6P9H5 292 aa9.22□□□□□ -0.93
CYLD-205ENST00000563629 MAP4K1Q92918 833 aa9.22□□□□□ -0.93
CYLD-205ENST00000563629 ZNF594Q96JF6 807 aaPredicted RBP9.22□□□□□ -0.93
CYLD-205ENST00000563629 USP25Q9UHP3 1055 aa9.22□□□□□ -0.93
CYLD-205ENST00000563629 NAP1L2Q9ULW6 460 aaPredicted RBP9.22□□□□□ -0.93
CYLD-205ENST00000563629 MTMR6Q9Y217 621 aa9.22□□□□□ -0.93
CYLD-205ENST00000563629 THRAP3Q9Y2W1 955 aaKnown RBP9.22□□□□□ -0.93
CYLD-205ENST00000563629 UTYO14607 1347 aa9.22□□□□□ -0.93
CYLD-205ENST00000563629 FAM177BA6PVY3 158 aa9.21□□□□□ -0.93
CYLD-205ENST00000563629 ATP6V1AP38606 617 aa9.21□□□□□ -0.93
CYLD-205ENST00000563629 LARP1BQ659C4 914 aaKnown RBP9.21□□□□□ -0.93
CYLD-205ENST00000563629 BARGINQ6ZT62 677 aa9.21□□□□□ -0.93
CYLD-205ENST00000563629 IL17RAQ96F46 866 aa9.21□□□□□ -0.93
CYLD-205ENST00000563629 TBC1D2BQ9UPU7 963 aa9.21□□□□□ -0.93
CYLD-205ENST00000563629 ZBTB1Q9Y2K1 713 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms