RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 KANK4Q5T7N3 995 aaPredicted RBP7.06□□□□□ -1.28
CDR2-203ENST00000563573 IER5Q5VY09 327 aa7.06□□□□□ -1.28
CDR2-203ENST00000563573 BTLAQ7Z6A9 289 aa7.06□□□□□ -1.28
CDR2-203ENST00000563573 SLC30A3Q99726 388 aa7.06□□□□□ -1.28
CDR2-203ENST00000563573 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.06□□□□□ -1.283e-10■■■■■ 130.4
CDR2-203ENST00000563573 CASKIN1Q8WXD9 1431 aa7.06□□□□□ -1.28
CDR2-203ENST00000563573 FYCO1Q9BQS8 1478 aa7.05□□□□□ -1.28
CDR2-203ENST00000563573 K7ELQ4 463 aaPredicted RBP7.05□□□□□ -1.28
CDR2-203ENST00000563573 LMOD1P29536 600 aaPredicted RBP7.05□□□□□ -1.28
CDR2-203ENST00000563573 DPYDQ12882 1025 aa7.05□□□□□ -1.28
CDR2-203ENST00000563573 ANKMY2Q8IV38 441 aa7.05□□□□□ -1.28
CDR2-203ENST00000563573 ZNF280CQ8ND82 737 aa7.05□□□□□ -1.28
CDR2-203ENST00000563573 RAPGEF6Q8TEU7 1601 aa7.05□□□□□ -1.28
CDR2-203ENST00000563573 EPB42P16452 691 aa7.04□□□□□ -1.28
CDR2-203ENST00000563573 ADH7P40394 386 aa7.04□□□□□ -1.28
CDR2-203ENST00000563573 CD163Q86VB7 1156 aa7.04□□□□□ -1.28
CDR2-203ENST00000563573 TRIM11Q96F44 468 aa7.04□□□□□ -1.28
CDR2-203ENST00000563573 CDK11AQ9UQ88 783 aaPredicted RBP7.04□□□□□ -1.28
CDR2-203ENST00000563573 HECW1Q76N89 1606 aa7.04□□□□□ -1.28
CDR2-203ENST00000563573 MAP3K1Q13233 1512 aa7.03□□□□□ -1.28
CDR2-203ENST00000563573 USP17L15C9J2P7 530 aa7.03□□□□□ -1.28
CDR2-203ENST00000563573 USP17L10C9JJH3 530 aa7.03□□□□□ -1.28
CDR2-203ENST00000563573 USP17L13C9JLJ4 530 aa7.03□□□□□ -1.28
CDR2-203ENST00000563573 USP17L12C9JPN9 530 aa7.03□□□□□ -1.28
CDR2-203ENST00000563573 USP17L11C9JVI0 530 aa7.03□□□□□ -1.28
CDR2-203ENST00000563573 USP17L21D6R901 530 aa7.03□□□□□ -1.28
CDR2-203ENST00000563573 USP17L18D6R9N7 530 aa7.03□□□□□ -1.28
CDR2-203ENST00000563573 USP17L22D6RA61 530 aa7.03□□□□□ -1.28
CDR2-203ENST00000563573 USP17L17D6RBQ6 530 aa7.03□□□□□ -1.28
CDR2-203ENST00000563573 USP17L19D6RCP7 530 aa7.03□□□□□ -1.28
CDR2-203ENST00000563573 USP17L20D6RJB6 530 aa7.03□□□□□ -1.28
CDR2-203ENST00000563573 TGFBR3LH3BV60 316 aa7.03□□□□□ -1.28
CDR2-203ENST00000563573 M0R082 166 aa7.03□□□□□ -1.28
CDR2-203ENST00000563573 APBA3O96018 575 aa7.03□□□□□ -1.28
CDR2-203ENST00000563573 USP17L24Q0WX57 530 aa7.03□□□□□ -1.28
CDR2-203ENST00000563573 PCSK7Q16549 785 aa7.03□□□□□ -1.28
CDR2-203ENST00000563573 CRTC2Q53ET0 693 aaPredicted RBP7.03□□□□□ -1.28
CDR2-203ENST00000563573 MICALL1Q8N3F8 863 aa7.03□□□□□ -1.28
CDR2-203ENST00000563573 ZNF417Q8TAU3 575 aa7.03□□□□□ -1.28
CDR2-203ENST00000563573 NGLY1Q96IV0 654 aa7.03□□□□□ -1.28
CDR2-203ENST00000563573 ZNF587Q96SQ5 575 aaPredicted RBP7.03□□□□□ -1.28
CDR2-203ENST00000563573 C11orf16Q9NQ32 467 aa7.03□□□□□ -1.28
CDR2-203ENST00000563573 CCDC18Q5T9S5 1454 aa7.03□□□□□ -1.28
CDR2-203ENST00000563573 PCF11O94913 1555 aaKnown RBP7.03□□□□□ -1.28
CDR2-203ENST00000563573 TRIM28Q13263 835 aaKnown RBP7.02□□□□□ -1.29
CDR2-203ENST00000563573 BHMTQ93088 406 aa7.02□□□□□ -1.29
CDR2-203ENST00000563573 VTI1AQ96AJ9 217 aa7.02□□□□□ -1.29
CDR2-203ENST00000563573 PNMA5Q96PV4 448 aa7.02□□□□□ -1.29
CDR2-203ENST00000563573 NACC1Q96RE7 527 aa7.02□□□□□ -1.29
CDR2-203ENST00000563573 ERCC6L2Q5T890 1561 aa7.02□□□□□ -1.29
CDR2-203ENST00000563573 UACAQ9BZF9 1416 aa7.01□□□□□ -1.29
CDR2-203ENST00000563573 TIAM1Q13009 1591 aa7.01□□□□□ -1.29
CDR2-203ENST00000563573 FOXO3O43524 673 aa7.01□□□□□ -1.29
CDR2-203ENST00000563573 GATA4P43694 442 aa7.01□□□□□ -1.29
CDR2-203ENST00000563573 FAM200AQ8TCP9 573 aa7.01□□□□□ -1.29
CDR2-203ENST00000563573 STARD13Q9Y3M8 1113 aa7.01□□□□□ -1.29
CDR2-203ENST00000563573 GTF3C3Q9Y5Q9 886 aa7.01□□□□□ -1.29
CDR2-203ENST00000563573 LRRIQ1Q96JM4 1722 aa7.01□□□□□ -1.29
CDR2-203ENST00000563573 CFAP43Q8NDM7 1665 aa7□□□□□ -1.29
CDR2-203ENST00000563573 ABCA8O94911 1581 aa7□□□□□ -1.29
CDR2-203ENST00000563573 PLB1Q6P1J6 1458 aa7□□□□□ -1.29
CDR2-203ENST00000563573 PLEKHD1A6NEE1 506 aa7□□□□□ -1.29
CDR2-203ENST00000563573 LILRB5O75023 590 aa7□□□□□ -1.29
CDR2-203ENST00000563573 CHRNA4P43681 627 aa7□□□□□ -1.29
CDR2-203ENST00000563573 TRIM26Q12899 539 aaPredicted RBP7□□□□□ -1.29
CDR2-203ENST00000563573 CCINQ13939 588 aa7□□□□□ -1.29
CDR2-203ENST00000563573 RAB44Q7Z6P3 723 aaPredicted RBP7□□□□□ -1.29
CDR2-203ENST00000563573 UBE2OQ9C0C9 1292 aaKnown RBP7□□□□□ -1.29
CDR2-203ENST00000563573 MTUS2Q5JR59 1369 aa6.99□□□□□ -1.29
CDR2-203ENST00000563573 ARID3CA6NKF2 412 aa6.99□□□□□ -1.29
CDR2-203ENST00000563573 ALBP02768 609 aa6.99□□□□□ -1.29
CDR2-203ENST00000563573 FURINP09958 794 aa6.99□□□□□ -1.29
CDR2-203ENST00000563573 RFX1P22670 979 aa6.99□□□□□ -1.29
CDR2-203ENST00000563573 WEE1P30291 646 aa6.99□□□□□ -1.29
CDR2-203ENST00000563573 C20orf204Q6ZNR8 217 aa6.99□□□□□ -1.29
CDR2-203ENST00000563573 GSX2Q9BZM3 304 aa6.99□□□□□ -1.29
CDR2-203ENST00000563573 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.99□□□□□ -1.29
CDR2-203ENST00000563573 EPRSP07814 1512 aaKnown RBP6.99□□□□□ -1.29
CDR2-203ENST00000563573 LRRC9Q6ZRR7 1453 aa6.98□□□□□ -1.29
CDR2-203ENST00000563573 RIMBP3CA6NJZ7 1639 aa6.98□□□□□ -1.29
CDR2-203ENST00000563573 RIMBP3BA6NNM3 1639 aa6.98□□□□□ -1.29
CDR2-203ENST00000563573 RIMBP3Q9UFD9 1639 aa6.98□□□□□ -1.29
CDR2-203ENST00000563573 ARHGEF11O15085 1522 aa6.98□□□□□ -1.29
CDR2-203ENST00000563573 ARID4AP29374 1257 aaPredicted RBP6.98□□□□□ -1.29
CDR2-203ENST00000563573 CYB5RLQ6IPT4 315 aa6.98□□□□□ -1.29
CDR2-203ENST00000563573 ARXQ96QS3 562 aa6.98□□□□□ -1.29
CDR2-203ENST00000563573 DMGDHQ9UI17 866 aaKnown RBP6.98□□□□□ -1.29
CDR2-203ENST00000563573 SLC6A14Q9UN76 642 aa6.98□□□□□ -1.29
CDR2-203ENST00000563573 UHRF1BP1LA0JNW5 1464 aa6.98□□□□□ -1.29
CDR2-203ENST00000563573 NUP153P49790 1475 aaKnown RBP6.98□□□□□ -1.29
CDR2-203ENST00000563573 ABCC2Q92887 1545 aa6.97□□□□□ -1.29
CDR2-203ENST00000563573 NID1P14543 1247 aa6.97□□□□□ -1.29
CDR2-203ENST00000563573 ARSDP51689 593 aa6.97□□□□□ -1.29
CDR2-203ENST00000563573 COL9A3Q14050 684 aaPredicted RBP6.97□□□□□ -1.29
CDR2-203ENST00000563573 C11orf91Q3C1V1 193 aa6.97□□□□□ -1.29
CDR2-203ENST00000563573 CFAP70Q5T0N1 1121 aa6.97□□□□□ -1.29
CDR2-203ENST00000563573 TRAPPC3LQ5T215 181 aa6.97□□□□□ -1.29
CDR2-203ENST00000563573 SUPT6HQ7KZ85 1726 aaKnown RBP6.97□□□□□ -1.29
CDR2-203ENST00000563573 MYO19Q96H55 970 aa6.97□□□□□ -1.29
CDR2-203ENST00000563573 IGFLR1Q9H665 355 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms