RNA–Protein interactions for RNA: ENST00000563290.5

SCAPER-207, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAPER, Length 5,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-207ENST00000563290 CDK12Q9NYV4 1490 aaPredicted RBP7.02□□□□□ -1.29
SCAPER-207ENST00000563290 VGLL3A8MV65 326 aa7.02□□□□□ -1.29
SCAPER-207ENST00000563290 TTF1Q15361 905 aaPredicted RBP7.02□□□□□ -1.29
SCAPER-207ENST00000563290 C17orf53Q8N3J3 647 aaPredicted RBP7.02□□□□□ -1.29
SCAPER-207ENST00000563290 USP26Q9BXU7 913 aa7.02□□□□□ -1.29
SCAPER-207ENST00000563290 NIP7Q9Y221 180 aaKnown RBP eCLIP7.02□□□□□ -1.29
SCAPER-207ENST00000563290 RIOK3O14730 519 aaKnown RBP7.02□□□□□ -1.29
SCAPER-207ENST00000563290 FOSBP53539 338 aa7.02□□□□□ -1.29
SCAPER-207ENST00000563290 IRX5P78411 483 aaPredicted RBP7.02□□□□□ -1.29
SCAPER-207ENST00000563290 METTL22Q9BUU2 404 aaPredicted RBP7.02□□□□□ -1.29
SCAPER-207ENST00000563290 CARD10Q9BWT7 1032 aa7.02□□□□□ -1.29
SCAPER-207ENST00000563290 RTCBQ9Y3I0 505 aaKnown RBP7.02□□□□□ -1.29
SCAPER-207ENST00000563290 NEXMIFQ5QGS0 1516 aa7.02□□□□□ -1.29
SCAPER-207ENST00000563290 IFT172Q9UG01 1749 aa7.02□□□□□ -1.29
SCAPER-207ENST00000563290 ZBTB22O15209 634 aa7.02□□□□□ -1.29
SCAPER-207ENST00000563290 UQCRFS1P1P0C7P4 283 aa7.02□□□□□ -1.29
SCAPER-207ENST00000563290 PDE1AP54750 535 aa7.02□□□□□ -1.29
SCAPER-207ENST00000563290 SLC20A2Q08357 652 aa7.02□□□□□ -1.29
SCAPER-207ENST00000563290 SYCP1Q15431 976 aa7.02□□□□□ -1.29
SCAPER-207ENST00000563290 ZNF496Q96IT1 587 aaPredicted RBP7.02□□□□□ -1.29
SCAPER-207ENST00000563290 NLRP3Q96P20 1036 aa7.02□□□□□ -1.29
SCAPER-207ENST00000563290 GSPT1P15170 499 aaKnown RBP7.01□□□□□ -1.29
SCAPER-207ENST00000563290 NYXQ9GZU5 481 aa7.01□□□□□ -1.29
SCAPER-207ENST00000563290 DLC1Q96QB1 1528 aa7.01□□□□□ -1.29
SCAPER-207ENST00000563290 IGSF3O75054 1194 aa7.01□□□□□ -1.29
SCAPER-207ENST00000563290 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.01□□□□□ -1.29
SCAPER-207ENST00000563290 CLSTN1O94985 981 aa7.01□□□□□ -1.29
SCAPER-207ENST00000563290 ST5P78524 1137 aa7.01□□□□□ -1.29
SCAPER-207ENST00000563290 PRPF40BQ6NWY9 871 aaKnown RBP7.01□□□□□ -1.29
SCAPER-207ENST00000563290 CCDC73Q6ZRK6 1079 aa7.01□□□□□ -1.29
SCAPER-207ENST00000563290 BRINP3Q76B58 766 aa7.01□□□□□ -1.29
SCAPER-207ENST00000563290 ANKRD18AQ8IVF6 992 aa7.01□□□□□ -1.29
SCAPER-207ENST00000563290 CHAMP1Q96JM3 812 aa7.01□□□□□ -1.29
SCAPER-207ENST00000563290 TTC12Q9H892 705 aaPredicted RBP7.01□□□□□ -1.29
SCAPER-207ENST00000563290 HOOK1Q9UJC3 728 aaKnown RBP7.01□□□□□ -1.29
SCAPER-207ENST00000563290 USP21Q9UK80 565 aa7.01□□□□□ -1.29
SCAPER-207ENST00000563290 TULP4Q9NRJ4 1543 aa7.01□□□□□ -1.29
SCAPER-207ENST00000563290 CCDC69A6NI79 296 aa7.01□□□□□ -1.29
SCAPER-207ENST00000563290 ADCY5O95622 1261 aa7.01□□□□□ -1.29
SCAPER-207ENST00000563290 SLFN14P0C7P3 912 aa7.01□□□□□ -1.29
SCAPER-207ENST00000563290 TPTE2Q6XPS3 522 aa7.01□□□□□ -1.29
SCAPER-207ENST00000563290 QRICH2Q9H0J4 1663 aa7□□□□□ -1.29
SCAPER-207ENST00000563290 GOLIM4O00461 696 aa7□□□□□ -1.29
SCAPER-207ENST00000563290 GIGYF1O75420 1035 aaPredicted RBP7□□□□□ -1.29
SCAPER-207ENST00000563290 FAM98CQ17RN3 349 aaKnown RBP7□□□□□ -1.29
SCAPER-207ENST00000563290 TRIM22Q8IYM9 498 aa7□□□□□ -1.29
SCAPER-207ENST00000563290 KNDC1Q76NI1 1749 aa7□□□□□ -1.29
SCAPER-207ENST00000563290 SPATA31A3Q5VYP0 1347 aa7□□□□□ -1.29
SCAPER-207ENST00000563290 IRS4O14654 1257 aaPredicted RBP7□□□□□ -1.29
SCAPER-207ENST00000563290 CASTP20810 708 aaKnown RBP7□□□□□ -1.29
SCAPER-207ENST00000563290 RBM5P52756 815 aaKnown RBP eCLIP7□□□□□ -1.29
SCAPER-207ENST00000563290 CCDC191Q8NCU4 936 aa7□□□□□ -1.29
SCAPER-207ENST00000563290 UBAC1Q9BSL1 405 aa7□□□□□ -1.29
SCAPER-207ENST00000563290 ERBB3P21860 1342 aa7□□□□□ -1.29
SCAPER-207ENST00000563290 WDR17Q8IZU2 1322 aa7□□□□□ -1.29
SCAPER-207ENST00000563290 WDR33Q9C0J8 1336 aaKnown RBP7□□□□□ -1.29
SCAPER-207ENST00000563290 PIK3C2BO00750 1634 aa7□□□□□ -1.29
SCAPER-207ENST00000563290 PTCH1Q13635 1447 aa7□□□□□ -1.29
SCAPER-207ENST00000563290 BECN2A8MW95 431 aa7□□□□□ -1.29
SCAPER-207ENST00000563290 GOLGA6L19H0YKK7 550 aa7□□□□□ -1.29
SCAPER-207ENST00000563290 SDSP20132 328 aa7□□□□□ -1.29
SCAPER-207ENST00000563290 FAM193AP78312 1265 aa7□□□□□ -1.29
SCAPER-207ENST00000563290 USP25Q9UHP3 1055 aa7□□□□□ -1.29
SCAPER-207ENST00000563290 CDKL5O76039 1030 aa7□□□□□ -1.29
SCAPER-207ENST00000563290 A1BGP04217 495 aa7□□□□□ -1.29
SCAPER-207ENST00000563290 STK3Q13188 491 aa7□□□□□ -1.29
SCAPER-207ENST00000563290 PARP10Q53GL7 1025 aa7□□□□□ -1.29
SCAPER-207ENST00000563290 DNAJC10Q8IXB1 793 aa7□□□□□ -1.29
SCAPER-207ENST00000563290 KIAA1524Q8TCG1 905 aa7□□□□□ -1.29
SCAPER-207ENST00000563290 CCDC47Q96A33 483 aaKnown RBP7□□□□□ -1.29
SCAPER-207ENST00000563290 NAPBQ9H115 298 aa7□□□□□ -1.29
SCAPER-207ENST00000563290 MTMR7Q9Y216 660 aa7□□□□□ -1.29
SCAPER-207ENST00000563290 TTC41PQ6P2S7 1318 aa7□□□□□ -1.29
SCAPER-207ENST00000563290 BRD1O95696 1058 aa6.99□□□□□ -1.29
SCAPER-207ENST00000563290 NCBP1Q09161 790 aaKnown RBP6.99□□□□□ -1.29
SCAPER-207ENST00000563290 DZIP1Q86YF9 867 aaKnown RBP6.99□□□□□ -1.29
SCAPER-207ENST00000563290 SLF2Q8IX21 1173 aa6.99□□□□□ -1.29
SCAPER-207ENST00000563290 ZNF396Q96N95 335 aaPredicted RBP6.99□□□□□ -1.29
SCAPER-207ENST00000563290 SNRKQ9NRH2 765 aa6.99□□□□□ -1.29
SCAPER-207ENST00000563290 PA2G4Q9UQ80 394 aaKnown RBP6.99□□□□□ -1.29
SCAPER-207ENST00000563290 CCDC66A2RUB6 948 aa6.99□□□□□ -1.29
SCAPER-207ENST00000563290 C6orf229H3BNL8 230 aa6.99□□□□□ -1.29
SCAPER-207ENST00000563290 LDHCP07864 332 aa6.99□□□□□ -1.29
SCAPER-207ENST00000563290 BRPF1P55201 1214 aaPredicted RBP6.99□□□□□ -1.29
SCAPER-207ENST00000563290 LARP1BQ659C4 914 aaKnown RBP6.99□□□□□ -1.29
SCAPER-207ENST00000563290 MPNDQ8N594 471 aa6.99□□□□□ -1.29
SCAPER-207ENST00000563290 KCNF1Q9H3M0 494 aa6.99□□□□□ -1.29
SCAPER-207ENST00000563290 ZNF287Q9HBT7 754 aa6.99□□□□□ -1.29
SCAPER-207ENST00000563290 VWDEQ8N2E2 1590 aa6.99□□□□□ -1.29
SCAPER-207ENST00000563290 ZFYP08048 801 aaPredicted RBP6.99□□□□□ -1.29
SCAPER-207ENST00000563290 TSHZ3Q63HK5 1081 aa6.99□□□□□ -1.29
SCAPER-207ENST00000563290 USP31Q70CQ4 1352 aa6.99□□□□□ -1.29
SCAPER-207ENST00000563290 DDX41Q9UJV9 622 aaKnown RBP6.99□□□□□ -1.29
SCAPER-207ENST00000563290 MORC2Q9Y6X9 1032 aaPredicted RBP6.99□□□□□ -1.29
SCAPER-207ENST00000563290 PTPRMP28827 1452 aa6.99□□□□□ -1.29
SCAPER-207ENST00000563290 KCNQ3O43525 872 aa6.99□□□□□ -1.29
SCAPER-207ENST00000563290 TPM3P06753 285 aa6.99□□□□□ -1.29
SCAPER-207ENST00000563290 IKQ13123 557 aaPredicted RBP6.99□□□□□ -1.29
SCAPER-207ENST00000563290 SPTY2D1Q68D10 685 aaPredicted RBP6.99□□□□□ -1.29
SCAPER-207ENST00000563290 UPF3BQ9BZI7 483 aaKnown RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms