RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 GRM1Q13255 1194 aa21.66■■□□□ 1.06
CMTM3-205ENST00000562707 GRAPQ13588 217 aa21.66■■□□□ 1.06
CMTM3-205ENST00000562707 TNIP1Q15025 636 aa21.66■■□□□ 1.06
CMTM3-205ENST00000562707 CST9Q5W186 159 aa21.66■■□□□ 1.06
CMTM3-205ENST00000562707 GRAPLQ8TC17 118 aaPredicted RBP21.66■■□□□ 1.06
CMTM3-205ENST00000562707 GPR101Q96P66 508 aaPredicted RBP21.66■■□□□ 1.06
CMTM3-205ENST00000562707 BCL2L13Q9BXK5 485 aa21.66■■□□□ 1.06
CMTM3-205ENST00000562707 LAS1LQ9Y4W2 734 aaKnown RBP21.66■■□□□ 1.06
CMTM3-205ENST00000562707 CHL1O00533 1208 aa21.65■■□□□ 1.06
CMTM3-205ENST00000562707 TMC4Q7Z404 712 aa21.65■■□□□ 1.06
CMTM3-205ENST00000562707 TLL2Q9Y6L7 1015 aa21.65■■□□□ 1.06
CMTM3-205ENST00000562707 CYP4F22Q6NT55 531 aa21.64■■□□□ 1.05
CMTM3-205ENST00000562707 CCDC146Q8IYE0 955 aa21.64■■□□□ 1.05
CMTM3-205ENST00000562707 LTBP1Q14766 1721 aa21.63■■□□□ 1.05
CMTM3-205ENST00000562707 RAD17O75943 681 aa21.63■■□□□ 1.05
CMTM3-205ENST00000562707 KRT24Q2M2I5 525 aa21.63■■□□□ 1.05
CMTM3-205ENST00000562707 CDHR2Q9BYE9 1310 aa21.62■■□□□ 1.05
CMTM3-205ENST00000562707 HDGFL1Q5TGJ6 251 aa21.62■■□□□ 1.05
CMTM3-205ENST00000562707 PLBD2Q8NHP8 589 aa21.62■■□□□ 1.05
CMTM3-205ENST00000562707 ZC3H15Q8WU90 426 aaKnown RBP21.62■■□□□ 1.05
CMTM3-205ENST00000562707 CHPF2Q9P2E5 772 aa21.62■■□□□ 1.05
CMTM3-205ENST00000562707 CELF2O95319 508 aaKnown RBP21.61■■□□□ 1.05
CMTM3-205ENST00000562707 WDR43Q15061 677 aaKnown RBP eCLIP21.61■■□□□ 1.05
CMTM3-205ENST00000562707 ANKRD13DQ6ZTN6 518 aa21.61■■□□□ 1.05
CMTM3-205ENST00000562707 RUNDC1Q96C34 613 aa21.61■■□□□ 1.05
CMTM3-205ENST00000562707 PGAP2Q9UHJ9 254 aa21.61■■□□□ 1.05
CMTM3-205ENST00000562707 MYBBP1AQ9BQG0 1328 aaKnown RBP21.6■■□□□ 1.05
CMTM3-205ENST00000562707 H7C1D1 291 aa21.6■■□□□ 1.05
CMTM3-205ENST00000562707 MAP2K2P36507 400 aa21.6■■□□□ 1.05
CMTM3-205ENST00000562707 ZNF428Q96B54 188 aa21.6■■□□□ 1.05
CMTM3-205ENST00000562707 GLIS2Q9BZE0 524 aaPredicted RBP21.6■■□□□ 1.05
CMTM3-205ENST00000562707 DBF4Q9UBU7 674 aaPredicted RBP21.6■■□□□ 1.05
CMTM3-205ENST00000562707 CNOT7Q9UIV1 285 aaKnown RBP21.6■■□□□ 1.05
CMTM3-205ENST00000562707 HOXB7P09629 217 aa21.59■■□□□ 1.05
CMTM3-205ENST00000562707 CDC37L1Q7L3B6 337 aa21.59■■□□□ 1.05
CMTM3-205ENST00000562707 SAPCD2Q86UD0 394 aa21.59■■□□□ 1.05
CMTM3-205ENST00000562707 TRIM35Q9UPQ4 493 aa21.59■■□□□ 1.05
CMTM3-205ENST00000562707 SF3B3Q15393 1217 aaKnown RBP21.58■■□□□ 1.05
CMTM3-205ENST00000562707 WASHC4Q2M389 1173 aa21.58■■□□□ 1.05
CMTM3-205ENST00000562707 FAM89AQ96GI7 184 aa21.58■■□□□ 1.05
CMTM3-205ENST00000562707 ABHD8Q96I13 439 aa21.58■■□□□ 1.05
CMTM3-205ENST00000562707 ISCA1Q9BUE6 129 aa21.58■■□□□ 1.05
CMTM3-205ENST00000562707 ZNF408Q9H9D4 720 aa21.58■■□□□ 1.05
CMTM3-205ENST00000562707 NSFL1CQ9UNZ2 370 aaKnown RBP21.58■■□□□ 1.05
CMTM3-205ENST00000562707 ATP5J2-PTCD1G3V325 749 aa21.57■■□□□ 1.04
CMTM3-205ENST00000562707 HIRAP54198 1017 aaPredicted RBP21.57■■□□□ 1.04
CMTM3-205ENST00000562707 DDX10Q13206 875 aaKnown RBP21.57■■□□□ 1.04
CMTM3-205ENST00000562707 HHIPL1Q96JK4 782 aa21.57■■□□□ 1.04
CMTM3-205ENST00000562707 HYPKQ9NX55 129 aa21.57■■□□□ 1.04
CMTM3-205ENST00000562707 YDJCA8MPS7 323 aa21.56■■□□□ 1.04
CMTM3-205ENST00000562707 AOC2O75106 756 aa21.56■■□□□ 1.04
CMTM3-205ENST00000562707 TRPM4Q8TD43 1214 aa21.56■■□□□ 1.04
CMTM3-205ENST00000562707 C6orf229H3BNL8 230 aa21.55■■□□□ 1.04
CMTM3-205ENST00000562707 RIMBP2O15034 1052 aa21.55■■□□□ 1.04
CMTM3-205ENST00000562707 MICALL2Q8IY33 904 aa21.55■■□□□ 1.04
CMTM3-205ENST00000562707 DPF2Q92785 391 aa21.55■■□□□ 1.04
CMTM3-205ENST00000562707 CELF1Q92879 486 aaKnown RBP21.55■■□□□ 1.04
CMTM3-205ENST00000562707 CA12O43570 354 aa21.54■■□□□ 1.04
CMTM3-205ENST00000562707 RTL5Q5HYW3 569 aaPredicted RBP21.54■■□□□ 1.04
CMTM3-205ENST00000562707 DUSP27Q5VZP5 1158 aa21.54■■□□□ 1.04
CMTM3-205ENST00000562707 CFAP44Q96MT7 982 aa21.54■■□□□ 1.04
CMTM3-205ENST00000562707 EYA3Q99504 573 aa21.54■■□□□ 1.04
CMTM3-205ENST00000562707 ADAMTS8Q9UP79 889 aa21.54■■□□□ 1.04
CMTM3-205ENST00000562707 ZBTB12Q9Y330 459 aaPredicted RBP21.54■■□□□ 1.04
CMTM3-205ENST00000562707 IRS4O14654 1257 aaPredicted RBP21.53■■□□□ 1.04
CMTM3-205ENST00000562707 TRIM28Q13263 835 aaKnown RBP21.53■■□□□ 1.04
CMTM3-205ENST00000562707 USP48Q86UV5 1035 aa21.53■■□□□ 1.04
CMTM3-205ENST00000562707 DBNDD1Q9H9R9 158 aa21.53■■□□□ 1.04
CMTM3-205ENST00000562707 SHTN1A0MZ66 631 aa21.52■■□□□ 1.04
CMTM3-205ENST00000562707 PSMD14O00487 310 aa21.52■■□□□ 1.04
CMTM3-205ENST00000562707 HSP90B1P14625 803 aaKnown RBP21.52■■□□□ 1.04
CMTM3-205ENST00000562707 GPSM2P81274 684 aa21.52■■□□□ 1.04
CMTM3-205ENST00000562707 RIC3Q7Z5B4 369 aa21.52■■□□□ 1.04
CMTM3-205ENST00000562707 TSKSQ9UJT2 592 aa21.52■■□□□ 1.04
CMTM3-205ENST00000562707 RPS12P25398 132 aaKnown RBP21.51■■□□□ 1.03
CMTM3-205ENST00000562707 RPS8P62241 208 aaKnown RBP21.51■■□□□ 1.03
CMTM3-205ENST00000562707 SAMD7Q7Z3H4 446 aa21.51■■□□□ 1.03
CMTM3-205ENST00000562707 POLLQ9UGP5 575 aa21.51■■□□□ 1.03
CMTM3-205ENST00000562707 BRPF1P55201 1214 aaPredicted RBP21.5■■□□□ 1.03
CMTM3-205ENST00000562707 GOLGA2Q08379 1002 aa21.5■■□□□ 1.03
CMTM3-205ENST00000562707 DOK7Q18PE1 504 aa21.5■■□□□ 1.03
CMTM3-205ENST00000562707 TBC1D10BQ4KMP7 808 aaPredicted RBP21.5■■□□□ 1.03
CMTM3-205ENST00000562707 G3V3G9 751 aa21.49■■□□□ 1.03
CMTM3-205ENST00000562707 ECE2O60344 883 aa21.49■■□□□ 1.03
CMTM3-205ENST00000562707 DCAF8Q5TAQ9 597 aa21.49■■□□□ 1.03
CMTM3-205ENST00000562707 ZC3H12CQ9C0D7 883 aaKnown RBP21.49■■□□□ 1.03
CMTM3-205ENST00000562707 MBIPQ9NS73 344 aa21.49■■□□□ 1.03
CMTM3-205ENST00000562707 ANKRD36CQ5JPF3 1778 aa21.48■■□□□ 1.03
CMTM3-205ENST00000562707 CCDC85CA6NKD9 419 aa21.48■■□□□ 1.03
CMTM3-205ENST00000562707 HUNKP57058 714 aa21.48■■□□□ 1.03
CMTM3-205ENST00000562707 NOGQ13253 232 aa21.48■■□□□ 1.03
CMTM3-205ENST00000562707 RBM26Q5T8P6 1007 aaKnown RBP21.48■■□□□ 1.03
CMTM3-205ENST00000562707 KRT26Q7Z3Y9 468 aa21.48■■□□□ 1.03
CMTM3-205ENST00000562707 ZBTB38Q8NAP3 1195 aaPredicted RBP21.48■■□□□ 1.03
CMTM3-205ENST00000562707 TBC1D16Q8TBP0 767 aa21.48■■□□□ 1.03
CMTM3-205ENST00000562707 DCPSQ96C86 337 aaKnown RBP21.48■■□□□ 1.03
CMTM3-205ENST00000562707 THSD7BQ9C0I4 1608 aa21.47■■□□□ 1.03
CMTM3-205ENST00000562707 CALD1Q05682 793 aaKnown RBP21.47■■□□□ 1.03
CMTM3-205ENST00000562707 DUOX1Q9NRD9 1551 aa21.47■■□□□ 1.03
CMTM3-205ENST00000562707 C2orf69Q8N8R5 385 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms