RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 CDHR2Q9BYE9 1310 aa20.54■□□□□ 0.88
COMMD4-206ENST00000562610 PDE8AO60658 829 aa20.54■□□□□ 0.88
COMMD4-206ENST00000562610 SF3B3Q15393 1217 aaKnown RBP20.54■□□□□ 0.88
COMMD4-206ENST00000562610 ATP6V0A2Q9Y487 856 aa20.54■□□□□ 0.88
COMMD4-206ENST00000562610 BBOX1O75936 387 aa20.53■□□□□ 0.88
COMMD4-206ENST00000562610 UBE3BQ7Z3V4 1068 aa20.53■□□□□ 0.88
COMMD4-206ENST00000562610 LINS1Q8NG48 757 aa20.53■□□□□ 0.88
COMMD4-206ENST00000562610 BCL2L13Q9BXK5 485 aa20.53■□□□□ 0.88
COMMD4-206ENST00000562610 WDR90Q96KV7 1748 aa20.53■□□□□ 0.88
COMMD4-206ENST00000562610 IARSP41252 1262 aaKnown RBP20.52■□□□□ 0.88
COMMD4-206ENST00000562610 GRIPAP1Q4V328 841 aa20.52■□□□□ 0.88
COMMD4-206ENST00000562610 TRMT2AQ8IZ69 625 aaKnown RBP20.52■□□□□ 0.88
COMMD4-206ENST00000562610 CCDC85AQ96PX6 553 aaPredicted RBP20.52■□□□□ 0.88
COMMD4-206ENST00000562610 PSMD1Q99460 953 aa20.52■□□□□ 0.88
COMMD4-206ENST00000562610 NMRK2Q9NPI5 230 aa20.52■□□□□ 0.88
COMMD4-206ENST00000562610 LTBP1Q14766 1721 aa20.52■□□□□ 0.88
COMMD4-206ENST00000562610 DUOX1Q9NRD9 1551 aa20.51■□□□□ 0.87
COMMD4-206ENST00000562610 GCKRQ14397 625 aa20.51■□□□□ 0.87
COMMD4-206ENST00000562610 CCDC152Q4G0S7 254 aa20.51■□□□□ 0.87
COMMD4-206ENST00000562610 SLC4A10Q6U841 1118 aa20.51■□□□□ 0.87
COMMD4-206ENST00000562610 MRPL50Q8N5N7 158 aaKnown RBP20.51■□□□□ 0.87
COMMD4-206ENST00000562610 SSH1Q8WYL5 1049 aa20.51■□□□□ 0.87
COMMD4-206ENST00000562610 CELF1Q92879 486 aaKnown RBP20.51■□□□□ 0.87
COMMD4-206ENST00000562610 CTSWP56202 376 aa20.5■□□□□ 0.87
COMMD4-206ENST00000562610 TMC4Q7Z404 712 aa20.5■□□□□ 0.87
COMMD4-206ENST00000562610 SP8Q8IXZ3 490 aa20.5■□□□□ 0.87
COMMD4-206ENST00000562610 SMC4Q9NTJ3 1288 aa20.5■□□□□ 0.87
COMMD4-206ENST00000562610 COL4A5P29400 1685 aa20.5■□□□□ 0.87
COMMD4-206ENST00000562610 SEC31BQ9NQW1 1179 aa20.49■□□□□ 0.87
COMMD4-206ENST00000562610 SCN4AP35499 1836 aa20.48■□□□□ 0.87
COMMD4-206ENST00000562610 GLTPD2A6NH11 291 aa20.48■□□□□ 0.87
COMMD4-206ENST00000562610 KIF3CO14782 793 aa20.48■□□□□ 0.87
COMMD4-206ENST00000562610 ALDH1L2Q3SY69 923 aa20.48■□□□□ 0.87
COMMD4-206ENST00000562610 BEND3Q5T5X7 828 aa20.48■□□□□ 0.87
COMMD4-206ENST00000562610 DPY19L2Q6NUT2 758 aa20.48■□□□□ 0.87
COMMD4-206ENST00000562610 DPP8Q6V1X1 898 aaPredicted RBP20.48■□□□□ 0.87
COMMD4-206ENST00000562610 PTPRCP08575 1304 aa20.48■□□□□ 0.87
COMMD4-206ENST00000562610 A0A1B0GUL6 1792 aa20.47■□□□□ 0.87
COMMD4-206ENST00000562610 H7C1W4 665 aa20.47■□□□□ 0.87
COMMD4-206ENST00000562610 CT47B1P0C2W7 299 aaPredicted RBP20.47■□□□□ 0.87
COMMD4-206ENST00000562610 C1QTNF8P60827 252 aa20.47■□□□□ 0.87
COMMD4-206ENST00000562610 MPNDQ8N594 471 aa20.47■□□□□ 0.87
COMMD4-206ENST00000562610 PPIP5K2O43314 1243 aa20.46■□□□□ 0.87
COMMD4-206ENST00000562610 C16orf71Q8IYS4 520 aaPredicted RBP20.46■□□□□ 0.87
COMMD4-206ENST00000562610 LARGE2Q8N3Y3 721 aa20.46■□□□□ 0.87
COMMD4-206ENST00000562610 SUPT20HQ8NEM7 779 aa20.46■□□□□ 0.87
COMMD4-206ENST00000562610 JDP2Q8WYK2 163 aa20.46■□□□□ 0.87
COMMD4-206ENST00000562610 SRCIN1Q9C0H9 1055 aa20.46■□□□□ 0.87
COMMD4-206ENST00000562610 RRAGCQ9HB90 399 aa20.46■□□□□ 0.87
COMMD4-206ENST00000562610 RPS8P62241 208 aaKnown RBP20.45■□□□□ 0.86
COMMD4-206ENST00000562610 AOC3Q16853 763 aa20.45■□□□□ 0.86
COMMD4-206ENST00000562610 ZNF541Q9H0D2 1346 aa20.45■□□□□ 0.86
COMMD4-206ENST00000562610 CASP7P55210 303 aa20.44■□□□□ 0.86
COMMD4-206ENST00000562610 ANKRD18AQ8IVF6 992 aa20.44■□□□□ 0.86
COMMD4-206ENST00000562610 TTLL11Q8NHH1 800 aa20.44■□□□□ 0.86
COMMD4-206ENST00000562610 CDC5LQ99459 802 aaKnown RBP20.44■□□□□ 0.86
COMMD4-206ENST00000562610 GREM2Q9H772 168 aa20.44■□□□□ 0.86
COMMD4-206ENST00000562610 RTL9Q8NET4 1388 aa20.44■□□□□ 0.86
COMMD4-206ENST00000562610 GRM8O00222 908 aa20.43■□□□□ 0.86
COMMD4-206ENST00000562610 ALDH1L1O75891 902 aa20.43■□□□□ 0.86
COMMD4-206ENST00000562610 NIM1KQ8IY84 436 aa20.43■□□□□ 0.86
COMMD4-206ENST00000562610 PLA2G12BQ9BX93 195 aa20.43■□□□□ 0.86
COMMD4-206ENST00000562610 C9orf78Q9NZ63 289 aaPredicted RBP20.43■□□□□ 0.86
COMMD4-206ENST00000562610 NSFL1CQ9UNZ2 370 aaKnown RBP20.43■□□□□ 0.86
COMMD4-206ENST00000562610 DDNO94850 711 aaPredicted RBP20.42■□□□□ 0.86
COMMD4-206ENST00000562610 FAM161AQ3B820 660 aa20.42■□□□□ 0.86
COMMD4-206ENST00000562610 RTFDC1Q9BY42 306 aaPredicted RBP20.42■□□□□ 0.86
COMMD4-206ENST00000562610 ZBED9Q6R2W3 1325 aa20.42■□□□□ 0.86
COMMD4-206ENST00000562610 GPSM2P81274 684 aa20.41■□□□□ 0.86
COMMD4-206ENST00000562610 CHMP3Q9Y3E7 222 aa20.41■□□□□ 0.86
COMMD4-206ENST00000562610 FZD9O00144 591 aa20.4■□□□□ 0.86
COMMD4-206ENST00000562610 VEGFAP15692 232 aaPredicted RBP20.4■□□□□ 0.86
COMMD4-206ENST00000562610 EIF6P56537 245 aaKnown RBP20.4■□□□□ 0.86
COMMD4-206ENST00000562610 ANKIB1Q9P2G1 1089 aa20.4■□□□□ 0.86
COMMD4-206ENST00000562610 PSME4Q14997 1843 aa20.39■□□□□ 0.86
COMMD4-206ENST00000562610 C6orf229H3BNL8 230 aa20.39■□□□□ 0.85
COMMD4-206ENST00000562610 TOMM70O94826 608 aa20.39■□□□□ 0.85
COMMD4-206ENST00000562610 ITGA6P23229 1130 aa20.39■□□□□ 0.85
COMMD4-206ENST00000562610 KIAA2012Q0VF49 1180 aa20.39■□□□□ 0.85
COMMD4-206ENST00000562610 VPS33BQ9H267 617 aa20.39■□□□□ 0.85
COMMD4-206ENST00000562610 KIF16BQ96L93 1317 aa20.38■□□□□ 0.85
COMMD4-206ENST00000562610 IGHMBP2P38935 993 aaKnown RBP20.38■□□□□ 0.85
COMMD4-206ENST00000562610 RARSP54136 660 aaKnown RBP20.38■□□□□ 0.85
COMMD4-206ENST00000562610 NOB1Q9ULX3 412 aaKnown RBP20.38■□□□□ 0.85
COMMD4-206ENST00000562610 GJA3Q9Y6H8 435 aa20.38■□□□□ 0.85
COMMD4-206ENST00000562610 UFL1O94874 794 aa20.37■□□□□ 0.85
COMMD4-206ENST00000562610 GPR101Q96P66 508 aaPredicted RBP20.37■□□□□ 0.85
COMMD4-206ENST00000562610 SCN9AQ15858 1988 aa20.37■□□□□ 0.85
COMMD4-206ENST00000562610 XDHP47989 1333 aa20.36■□□□□ 0.85
COMMD4-206ENST00000562610 ANKRD18BA2A2Z9 1011 aa20.36■□□□□ 0.85
COMMD4-206ENST00000562610 RIMBP2O15034 1052 aa20.36■□□□□ 0.85
COMMD4-206ENST00000562610 CSF1RP07333 972 aa20.36■□□□□ 0.85
COMMD4-206ENST00000562610 FOXO4P98177 505 aa20.36■□□□□ 0.85
COMMD4-206ENST00000562610 WASHC4Q2M389 1173 aa20.36■□□□□ 0.85
COMMD4-206ENST00000562610 GPC2Q8N158 579 aa20.36■□□□□ 0.85
COMMD4-206ENST00000562610 TBC1D16Q8TBP0 767 aa20.36■□□□□ 0.85
COMMD4-206ENST00000562610 EYA3Q99504 573 aa20.36■□□□□ 0.85
COMMD4-206ENST00000562610 POLLQ9UGP5 575 aa20.36■□□□□ 0.85
COMMD4-206ENST00000562610 GGA1Q9UJY5 639 aa20.36■□□□□ 0.85
COMMD4-206ENST00000562610 IQCA1LA6NCM1 817 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms