RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 SSH1Q8WYL5 1049 aa19.62■□□□□ 0.73
CCNDBP1-203ENST00000562553 CDHR2Q9BYE9 1310 aa19.61■□□□□ 0.73
CCNDBP1-203ENST00000562553 APLP1P51693 650 aa19.61■□□□□ 0.73
CCNDBP1-203ENST00000562553 FKBP4Q02790 459 aaKnown RBP eCLIP19.61■□□□□ 0.73
CCNDBP1-203ENST00000562553 GRAPQ13588 217 aa19.61■□□□□ 0.73
CCNDBP1-203ENST00000562553 GRAPLQ8TC17 118 aaPredicted RBP19.61■□□□□ 0.73
CCNDBP1-203ENST00000562553 BCL2L13Q9BXK5 485 aa19.61■□□□□ 0.73
CCNDBP1-203ENST00000562553 LRRC37AA6NMS7 1700 aa19.6■□□□□ 0.73
CCNDBP1-203ENST00000562553 RTKN2Q8IZC4 609 aa19.6■□□□□ 0.73
CCNDBP1-203ENST00000562553 LINS1Q8NG48 757 aa19.6■□□□□ 0.73
CCNDBP1-203ENST00000562553 ZNF277Q9NRM2 450 aaPredicted RBP19.6■□□□□ 0.73
CCNDBP1-203ENST00000562553 PDE8AO60658 829 aa19.59■□□□□ 0.73
CCNDBP1-203ENST00000562553 GCKRQ14397 625 aa19.59■□□□□ 0.73
CCNDBP1-203ENST00000562553 BEND3Q5T5X7 828 aa19.59■□□□□ 0.73
CCNDBP1-203ENST00000562553 UBE3BQ7Z3V4 1068 aa19.59■□□□□ 0.73
CCNDBP1-203ENST00000562553 CELF1Q92879 486 aaKnown RBP19.59■□□□□ 0.73
CCNDBP1-203ENST00000562553 ATP6V0A2Q9Y487 856 aa19.59■□□□□ 0.73
CCNDBP1-203ENST00000562553 H7C1W4 665 aa19.58■□□□□ 0.72
CCNDBP1-203ENST00000562553 FSTL1Q12841 308 aa19.58■□□□□ 0.72
CCNDBP1-203ENST00000562553 CC2D2BQ6DHV5 1058 aa19.58■□□□□ 0.72
CCNDBP1-203ENST00000562553 C16orf71Q8IYS4 520 aaPredicted RBP19.58■□□□□ 0.72
CCNDBP1-203ENST00000562553 CCDC85AQ96PX6 553 aaPredicted RBP19.58■□□□□ 0.72
CCNDBP1-203ENST00000562553 COL4A5P29400 1685 aa19.57■□□□□ 0.72
CCNDBP1-203ENST00000562553 BBOX1O75936 387 aa19.57■□□□□ 0.72
CCNDBP1-203ENST00000562553 CASP7P55210 303 aa19.57■□□□□ 0.72
CCNDBP1-203ENST00000562553 PSMD1Q99460 953 aa19.57■□□□□ 0.72
CCNDBP1-203ENST00000562553 RRAGCQ9HB90 399 aa19.57■□□□□ 0.72
CCNDBP1-203ENST00000562553 SEC31BQ9NQW1 1179 aa19.57■□□□□ 0.72
CCNDBP1-203ENST00000562553 SPEF2Q9C093 1822 aa19.57■□□□□ 0.72
CCNDBP1-203ENST00000562553 GLTPD2A6NH11 291 aa19.56■□□□□ 0.72
CCNDBP1-203ENST00000562553 HSP90B1P14625 803 aaKnown RBP19.56■□□□□ 0.72
CCNDBP1-203ENST00000562553 CTSWP56202 376 aa19.56■□□□□ 0.72
CCNDBP1-203ENST00000562553 ALDH1L2Q3SY69 923 aa19.56■□□□□ 0.72
CCNDBP1-203ENST00000562553 SMC4Q9NTJ3 1288 aa19.56■□□□□ 0.72
CCNDBP1-203ENST00000562553 IARSP41252 1262 aaKnown RBP19.55■□□□□ 0.72
CCNDBP1-203ENST00000562553 SLC4A10Q6U841 1118 aa19.55■□□□□ 0.72
CCNDBP1-203ENST00000562553 SP8Q8IXZ3 490 aa19.55■□□□□ 0.72
CCNDBP1-203ENST00000562553 DNAJC5GQ8N7S2 189 aa19.55■□□□□ 0.72
CCNDBP1-203ENST00000562553 WDR90Q96KV7 1748 aa19.55■□□□□ 0.72
CCNDBP1-203ENST00000562553 DUOX1Q9NRD9 1551 aa19.55■□□□□ 0.72
CCNDBP1-203ENST00000562553 CT47B1P0C2W7 299 aaPredicted RBP19.54■□□□□ 0.72
CCNDBP1-203ENST00000562553 CCDC152Q4G0S7 254 aa19.54■□□□□ 0.72
CCNDBP1-203ENST00000562553 LTBP1Q14766 1721 aa19.54■□□□□ 0.72
CCNDBP1-203ENST00000562553 PTPRCP08575 1304 aa19.53■□□□□ 0.72
CCNDBP1-203ENST00000562553 GRIPAP1Q4V328 841 aa19.53■□□□□ 0.72
CCNDBP1-203ENST00000562553 TTLL11Q8NHH1 800 aa19.53■□□□□ 0.72
CCNDBP1-203ENST00000562553 RPS8P62241 208 aaKnown RBP19.52■□□□□ 0.72
CCNDBP1-203ENST00000562553 TMC4Q7Z404 712 aa19.52■□□□□ 0.72
CCNDBP1-203ENST00000562553 PLA2G12BQ9BX93 195 aa19.52■□□□□ 0.72
CCNDBP1-203ENST00000562553 TMX4Q9H1E5 349 aaPredicted RBP19.52■□□□□ 0.72
CCNDBP1-203ENST00000562553 ZBED9Q6R2W3 1325 aa19.51■□□□□ 0.71
CCNDBP1-203ENST00000562553 VEGFAP15692 232 aaPredicted RBP19.51■□□□□ 0.71
CCNDBP1-203ENST00000562553 RARSP54136 660 aaKnown RBP19.51■□□□□ 0.71
CCNDBP1-203ENST00000562553 DPP8Q6V1X1 898 aaPredicted RBP19.51■□□□□ 0.71
CCNDBP1-203ENST00000562553 MPNDQ8N594 471 aa19.51■□□□□ 0.71
CCNDBP1-203ENST00000562553 SRCIN1Q9C0H9 1055 aa19.51■□□□□ 0.71
CCNDBP1-203ENST00000562553 GREM2Q9H772 168 aa19.51■□□□□ 0.71
CCNDBP1-203ENST00000562553 ZNF541Q9H0D2 1346 aa19.51■□□□□ 0.71
CCNDBP1-203ENST00000562553 GRM8O00222 908 aa19.5■□□□□ 0.71
CCNDBP1-203ENST00000562553 ALDH1L1O75891 902 aa19.5■□□□□ 0.71
CCNDBP1-203ENST00000562553 SMC1BQ8NDV3 1235 aa19.5■□□□□ 0.71
CCNDBP1-203ENST00000562553 RTFDC1Q9BY42 306 aaPredicted RBP19.5■□□□□ 0.71
CCNDBP1-203ENST00000562553 RTL9Q8NET4 1388 aa19.49■□□□□ 0.71
CCNDBP1-203ENST00000562553 GPSM2P81274 684 aa19.49■□□□□ 0.71
CCNDBP1-203ENST00000562553 AOC3Q16853 763 aa19.49■□□□□ 0.71
CCNDBP1-203ENST00000562553 DPY19L2Q6NUT2 758 aa19.49■□□□□ 0.71
CCNDBP1-203ENST00000562553 PPIP5K2O43314 1243 aa19.48■□□□□ 0.71
CCNDBP1-203ENST00000562553 DDNO94850 711 aaPredicted RBP19.48■□□□□ 0.71
CCNDBP1-203ENST00000562553 BRPF1P55201 1214 aaPredicted RBP19.48■□□□□ 0.71
CCNDBP1-203ENST00000562553 FAM161AQ3B820 660 aa19.48■□□□□ 0.71
CCNDBP1-203ENST00000562553 LARGE2Q8N3Y3 721 aa19.48■□□□□ 0.71
CCNDBP1-203ENST00000562553 NOB1Q9ULX3 412 aaKnown RBP19.48■□□□□ 0.71
CCNDBP1-203ENST00000562553 POTECB2RU33 542 aa19.47■□□□□ 0.71
CCNDBP1-203ENST00000562553 FZD9O00144 591 aa19.47■□□□□ 0.71
CCNDBP1-203ENST00000562553 CSF1RP07333 972 aa19.47■□□□□ 0.71
CCNDBP1-203ENST00000562553 FOXO4P98177 505 aa19.47■□□□□ 0.71
CCNDBP1-203ENST00000562553 EPHA10Q5JZY3 1008 aa19.47■□□□□ 0.71
CCNDBP1-203ENST00000562553 ANKRD18AQ8IVF6 992 aa19.47■□□□□ 0.71
CCNDBP1-203ENST00000562553 SUPT20HQ8NEM7 779 aa19.47■□□□□ 0.71
CCNDBP1-203ENST00000562553 C9orf78Q9NZ63 289 aaPredicted RBP19.47■□□□□ 0.71
CCNDBP1-203ENST00000562553 NSFL1CQ9UNZ2 370 aaKnown RBP19.47■□□□□ 0.71
CCNDBP1-203ENST00000562553 JDP2Q8WYK2 163 aa19.46■□□□□ 0.71
CCNDBP1-203ENST00000562553 CDC5LQ99459 802 aaKnown RBP19.46■□□□□ 0.71
CCNDBP1-203ENST00000562553 POLLQ9UGP5 575 aa19.46■□□□□ 0.71
CCNDBP1-203ENST00000562553 NBPF7P0C2Y1 421 aaPredicted RBP19.45■□□□□ 0.7
CCNDBP1-203ENST00000562553 ITGA6P23229 1130 aa19.45■□□□□ 0.7
CCNDBP1-203ENST00000562553 IFFO2Q5TF58 517 aa19.45■□□□□ 0.7
CCNDBP1-203ENST00000562553 SUCLG2Q96I99 432 aa19.45■□□□□ 0.7
CCNDBP1-203ENST00000562553 GPR101Q96P66 508 aaPredicted RBP19.45■□□□□ 0.7
CCNDBP1-203ENST00000562553 KIAA2012Q0VF49 1180 aa19.44■□□□□ 0.7
CCNDBP1-203ENST00000562553 NIM1KQ8IY84 436 aa19.44■□□□□ 0.7
CCNDBP1-203ENST00000562553 KAZALD1Q96I82 304 aa19.44■□□□□ 0.7
CCNDBP1-203ENST00000562553 VPS33BQ9H267 617 aa19.44■□□□□ 0.7
CCNDBP1-203ENST00000562553 UTYO14607 1347 aa19.44■□□□□ 0.7
CCNDBP1-203ENST00000562553 A0A1B0GUL6 1792 aa19.43■□□□□ 0.7
CCNDBP1-203ENST00000562553 BCAR3O75815 825 aa19.43■□□□□ 0.7
CCNDBP1-203ENST00000562553 LMBR1LQ6UX01 489 aa19.43■□□□□ 0.7
CCNDBP1-203ENST00000562553 TBC1D16Q8TBP0 767 aa19.43■□□□□ 0.7
CCNDBP1-203ENST00000562553 KLRG1Q96E93 195 aa19.43■□□□□ 0.7
CCNDBP1-203ENST00000562553 PODXL2Q9NZ53 605 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 454 ms