RNA–Protein interactions for RNA: ENST00000562425.1

PKD1-226, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 608 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-226ENST00000562425 BBOX1O75936 387 aa20.82■□□□□ 0.92
PKD1-226ENST00000562425 GRIPAP1Q4V328 841 aa20.82■□□□□ 0.92
PKD1-226ENST00000562425 RTKN2Q8IZC4 609 aa20.82■□□□□ 0.92
PKD1-226ENST00000562425 BCL2L13Q9BXK5 485 aa20.82■□□□□ 0.92
PKD1-226ENST00000562425 RRAGCQ9HB90 399 aa20.82■□□□□ 0.92
PKD1-226ENST00000562425 H7C1W4 665 aa20.81■□□□□ 0.92
PKD1-226ENST00000562425 BEND3Q5T5X7 828 aa20.81■□□□□ 0.92
PKD1-226ENST00000562425 SLC4A10Q6U841 1118 aa20.81■□□□□ 0.92
PKD1-226ENST00000562425 PPEF1O14829 653 aaPredicted RBP20.8■□□□□ 0.92
PKD1-226ENST00000562425 ALDH1L1O75891 902 aa20.8■□□□□ 0.92
PKD1-226ENST00000562425 BRPF1P55201 1214 aaPredicted RBP20.8■□□□□ 0.92
PKD1-226ENST00000562425 JARID2Q92833 1246 aaPredicted RBP20.8■□□□□ 0.92
PKD1-226ENST00000562425 SRCIN1Q9C0H9 1055 aa20.8■□□□□ 0.92
PKD1-226ENST00000562425 TAOK3Q9H2K8 898 aa20.8■□□□□ 0.92
PKD1-226ENST00000562425 SLX4Q8IY92 1834 aa20.8■□□□□ 0.92
PKD1-226ENST00000562425 LTBP3Q9NS15 1303 aa20.79■□□□□ 0.92
PKD1-226ENST00000562425 GLTPD2A6NH11 291 aa20.79■□□□□ 0.92
PKD1-226ENST00000562425 NFKBIEO00221 500 aa20.79■□□□□ 0.92
PKD1-226ENST00000562425 RARSP54136 660 aaKnown RBP20.79■□□□□ 0.92
PKD1-226ENST00000562425 RASSF7Q02833 373 aa20.79■□□□□ 0.92
PKD1-226ENST00000562425 GRAPQ13588 217 aa20.79■□□□□ 0.92
PKD1-226ENST00000562425 CCDC152Q4G0S7 254 aa20.79■□□□□ 0.92
PKD1-226ENST00000562425 UBE3BQ7Z3V4 1068 aa20.79■□□□□ 0.92
PKD1-226ENST00000562425 TMC4Q7Z404 712 aa20.79■□□□□ 0.92
PKD1-226ENST00000562425 GRAPLQ8TC17 118 aaPredicted RBP20.79■□□□□ 0.92
PKD1-226ENST00000562425 ABCC4O15439 1325 aa20.78■□□□□ 0.92
PKD1-226ENST00000562425 PCNTO95613 3336 aa20.78■□□□□ 0.92
PKD1-226ENST00000562425 VEGFAP15692 232 aaPredicted RBP20.78■□□□□ 0.92
PKD1-226ENST00000562425 TIAM2Q8IVF5 1701 aa20.78■□□□□ 0.92
PKD1-226ENST00000562425 CCDC88AQ3V6T2 1871 aa20.77■□□□□ 0.92
PKD1-226ENST00000562425 C9orf78Q9NZ63 289 aaPredicted RBP20.77■□□□□ 0.92
PKD1-226ENST00000562425 ATP6V0A2Q9Y487 856 aa20.77■□□□□ 0.92
PKD1-226ENST00000562425 KIF16BQ96L93 1317 aa20.77■□□□□ 0.91
PKD1-226ENST00000562425 FKBP4Q02790 459 aaKnown RBP eCLIP20.76■□□□□ 0.91
PKD1-226ENST00000562425 SP8Q8IXZ3 490 aa20.76■□□□□ 0.91
PKD1-226ENST00000562425 API5Q9BZZ5 524 aaKnown RBP20.76■□□□□ 0.91
PKD1-226ENST00000562425 CTSWP56202 376 aa20.75■□□□□ 0.91
PKD1-226ENST00000562425 PLA2G12BQ9BX93 195 aa20.75■□□□□ 0.91
PKD1-226ENST00000562425 NOB1Q9ULX3 412 aaKnown RBP20.75■□□□□ 0.91
PKD1-226ENST00000562425 DDX60Q8IY21 1712 aaKnown RBP20.75■□□□□ 0.91
PKD1-226ENST00000562425 DICER1Q9UPY3 1922 aaKnown RBP20.74■□□□□ 0.91
PKD1-226ENST00000562425 GRM8O00222 908 aa20.74■□□□□ 0.91
PKD1-226ENST00000562425 IPO8O15397 1037 aaKnown RBP20.74■□□□□ 0.91
PKD1-226ENST00000562425 RPS8P62241 208 aaKnown RBP20.74■□□□□ 0.91
PKD1-226ENST00000562425 HTRA3P83110 453 aa20.74■□□□□ 0.91
PKD1-226ENST00000562425 CACNA1SQ13698 1873 aa20.74■□□□□ 0.91
PKD1-226ENST00000562425 OLFM4Q6UX06 510 aa20.74■□□□□ 0.91
PKD1-226ENST00000562425 PSMD1Q99460 953 aa20.74■□□□□ 0.91
PKD1-226ENST00000562425 CASP7P55210 303 aa20.73■□□□□ 0.91
PKD1-226ENST00000562425 TTLL11Q8NHH1 800 aa20.73■□□□□ 0.91
PKD1-226ENST00000562425 ARHGAP45Q92619 1136 aa20.73■□□□□ 0.91
PKD1-226ENST00000562425 LAMB2P55268 1798 aa20.72■□□□□ 0.91
PKD1-226ENST00000562425 PRELPP51888 382 aa20.72■□□□□ 0.91
PKD1-226ENST00000562425 CELF1Q92879 486 aaKnown RBP20.72■□□□□ 0.91
PKD1-226ENST00000562425 CDC5LQ99459 802 aaKnown RBP20.72■□□□□ 0.91
PKD1-226ENST00000562425 FER1L6Q2WGJ9 1857 aa20.72■□□□□ 0.91
PKD1-226ENST00000562425 CCT4P50991 539 aaKnown RBP20.71■□□□□ 0.91
PKD1-226ENST00000562425 DPY19L2Q6NUT2 758 aa20.71■□□□□ 0.91
PKD1-226ENST00000562425 MPNDQ8N594 471 aa20.71■□□□□ 0.91
PKD1-226ENST00000562425 SUPT20HQ8NEM7 779 aa20.71■□□□□ 0.91
PKD1-226ENST00000562425 CCDC85AQ96PX6 553 aaPredicted RBP20.71■□□□□ 0.91
PKD1-226ENST00000562425 SEC31BQ9NQW1 1179 aa20.71■□□□□ 0.91
PKD1-226ENST00000562425 DPP8Q6V1X1 898 aaPredicted RBP20.7■□□□□ 0.9
PKD1-226ENST00000562425 ANKRD18AQ8IVF6 992 aa20.7■□□□□ 0.9
PKD1-226ENST00000562425 RTL9Q8NET4 1388 aa20.7■□□□□ 0.9
PKD1-226ENST00000562425 CSF1RP07333 972 aa20.69■□□□□ 0.9
PKD1-226ENST00000562425 IARSP41252 1262 aaKnown RBP20.69■□□□□ 0.9
PKD1-226ENST00000562425 VPS33BQ9H267 617 aa20.69■□□□□ 0.9
PKD1-226ENST00000562425 ZNF277Q9NRM2 450 aaPredicted RBP20.69■□□□□ 0.9
PKD1-226ENST00000562425 FRAT1Q92837 279 aaPredicted RBP20.68■□□□□ 0.9
PKD1-226ENST00000562425 GREM2Q9H772 168 aa20.68■□□□□ 0.9
PKD1-226ENST00000562425 UTYO14607 1347 aa20.68■□□□□ 0.9
PKD1-226ENST00000562425 BCAR3O75815 825 aa20.67■□□□□ 0.9
PKD1-226ENST00000562425 JDP2Q8WYK2 163 aa20.67■□□□□ 0.9
PKD1-226ENST00000562425 RTFDC1Q9BY42 306 aaPredicted RBP20.67■□□□□ 0.9
PKD1-226ENST00000562425 SNED1Q8TER0 1413 aa20.67■□□□□ 0.9
PKD1-226ENST00000562425 FOXO4P98177 505 aa20.66■□□□□ 0.9
PKD1-226ENST00000562425 COL13A1Q5TAT6 717 aaPredicted RBP20.66■□□□□ 0.9
PKD1-226ENST00000562425 NSFL1CQ9UNZ2 370 aaKnown RBP20.66■□□□□ 0.9
PKD1-226ENST00000562425 ANKRD18BA2A2Z9 1011 aa20.65■□□□□ 0.9
PKD1-226ENST00000562425 NBPF7P0C2Y1 421 aaPredicted RBP20.65■□□□□ 0.9
PKD1-226ENST00000562425 ITGA6P23229 1130 aa20.65■□□□□ 0.9
PKD1-226ENST00000562425 IGHMBP2P38935 993 aaKnown RBP20.65■□□□□ 0.9
PKD1-226ENST00000562425 ATF7IPQ6VMQ6 1270 aa20.65■□□□□ 0.9
PKD1-226ENST00000562425 LARGE2Q8N3Y3 721 aa20.65■□□□□ 0.9
PKD1-226ENST00000562425 BSDC1Q9NW68 430 aaPredicted RBP20.65■□□□□ 0.9
PKD1-226ENST00000562425 HDAC5Q9UQL6 1122 aa20.65■□□□□ 0.9
PKD1-226ENST00000562425 CHMP3Q9Y3E7 222 aa20.65■□□□□ 0.9
PKD1-226ENST00000562425 POTECB2RU33 542 aa20.64■□□□□ 0.89
PKD1-226ENST00000562425 IFIT5Q13325 482 aaKnown RBP20.64■□□□□ 0.89
PKD1-226ENST00000562425 FAM161AQ3B820 660 aa20.64■□□□□ 0.89
PKD1-226ENST00000562425 ZKSCAN2Q63HK3 967 aa20.64■□□□□ 0.89
PKD1-226ENST00000562425 LMBR1LQ6UX01 489 aa20.64■□□□□ 0.89
PKD1-226ENST00000562425 USP44Q9H0E7 712 aa20.64■□□□□ 0.89
PKD1-226ENST00000562425 PPIP5K2O43314 1243 aa20.63■□□□□ 0.89
PKD1-226ENST00000562425 CCDC57Q2TAC2 916 aa20.63■□□□□ 0.89
PKD1-226ENST00000562425 MPHOSPH8Q99549 860 aa20.63■□□□□ 0.89
PKD1-226ENST00000562425 ANKIB1Q9P2G1 1089 aa20.63■□□□□ 0.89
PKD1-226ENST00000562425 C6orf229H3BNL8 230 aa20.62■□□□□ 0.89
PKD1-226ENST00000562425 TRIM27P14373 513 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms