RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 GPATCH3Q96I76 525 aa17.56■□□□□ 0.4
COMMD4-205ENST00000562310 SETDB2Q96T68 719 aa17.56■□□□□ 0.4
COMMD4-205ENST00000562310 SIL1Q9H173 461 aa17.56■□□□□ 0.4
COMMD4-205ENST00000562310 IL1RAPL2Q9NP60 686 aa17.56■□□□□ 0.4
COMMD4-205ENST00000562310 CARMIL3Q8ND23 1372 aa17.55■□□□□ 0.4
COMMD4-205ENST00000562310 SASH1O94885 1247 aa17.55■□□□□ 0.4
COMMD4-205ENST00000562310 IL15P40933 162 aaPredicted RBP17.55■□□□□ 0.4
COMMD4-205ENST00000562310 TBC1D9BQ66K14 1250 aa17.55■□□□□ 0.4
COMMD4-205ENST00000562310 AMIGO3Q86WK7 504 aa17.55■□□□□ 0.4
COMMD4-205ENST00000562310 FLAD1Q8NFF5 587 aa17.55■□□□□ 0.4
COMMD4-205ENST00000562310 TTLL11Q8NHH1 800 aa17.55■□□□□ 0.4
COMMD4-205ENST00000562310 AK9Q5TCS8 1911 aa17.55■□□□□ 0.4
COMMD4-205ENST00000562310 TTC41PQ6P2S7 1318 aa17.54■□□□□ 0.4
COMMD4-205ENST00000562310 ANKRD18BA2A2Z9 1011 aa17.54■□□□□ 0.4
COMMD4-205ENST00000562310 EYA2O00167 538 aa17.54■□□□□ 0.4
COMMD4-205ENST00000562310 EIF5BO60841 1220 aaKnown RBP17.54■□□□□ 0.4
COMMD4-205ENST00000562310 TAF7LQ5H9L4 462 aa17.54■□□□□ 0.4
COMMD4-205ENST00000562310 KLHDC4Q8TBB5 520 aa17.54■□□□□ 0.4
COMMD4-205ENST00000562310 IFIT2P09913 472 aaKnown RBP17.53■□□□□ 0.4
COMMD4-205ENST00000562310 CCDC152Q4G0S7 254 aa17.53■□□□□ 0.4
COMMD4-205ENST00000562310 SYNE4Q8N205 404 aa17.53■□□□□ 0.4
COMMD4-205ENST00000562310 AKT1S1Q96B36 256 aa17.53■□□□□ 0.4
COMMD4-205ENST00000562310 GPR108Q9NPR9 543 aa17.53■□□□□ 0.4
COMMD4-205ENST00000562310 RIC1Q4ADV7 1423 aa17.53■□□□□ 0.4
COMMD4-205ENST00000562310 FAM177BA6PVY3 158 aa17.52■□□□□ 0.4
COMMD4-205ENST00000562310 GSPT1P15170 499 aaKnown RBP17.52■□□□□ 0.4
COMMD4-205ENST00000562310 ITGA6P23229 1130 aa17.52■□□□□ 0.4
COMMD4-205ENST00000562310 SLC10A5Q5PT55 438 aa17.52■□□□□ 0.4
COMMD4-205ENST00000562310 AACSQ86V21 672 aa17.52■□□□□ 0.4
COMMD4-205ENST00000562310 NBPF5PQ86XG9 351 aaPredicted RBP17.52■□□□□ 0.4
COMMD4-205ENST00000562310 BCL11AQ9H165 835 aa17.52■□□□□ 0.4
COMMD4-205ENST00000562310 ZNF609O15014 1411 aa17.51■□□□□ 0.39
COMMD4-205ENST00000562310 ERC2O15083 957 aa17.51■□□□□ 0.39
COMMD4-205ENST00000562310 CDC45O75419 566 aa17.51■□□□□ 0.39
COMMD4-205ENST00000562310 HCLS1P14317 486 aaPredicted RBP17.51■□□□□ 0.39
COMMD4-205ENST00000562310 GTF2E1P29083 439 aaPredicted RBP17.51■□□□□ 0.39
COMMD4-205ENST00000562310 SF3B2Q13435 895 aaKnown RBP17.51■□□□□ 0.39
COMMD4-205ENST00000562310 TPTE2Q6XPS3 522 aa17.51■□□□□ 0.39
COMMD4-205ENST00000562310 BICDL1Q6ZP65 573 aa17.51■□□□□ 0.39
COMMD4-205ENST00000562310 SMIM5Q71RC9 77 aa17.51■□□□□ 0.39
COMMD4-205ENST00000562310 ATG9AQ7Z3C6 839 aa17.51■□□□□ 0.39
COMMD4-205ENST00000562310 NUTM1Q86Y26 1132 aa17.51■□□□□ 0.39
COMMD4-205ENST00000562310 GREM2Q9H772 168 aa17.51■□□□□ 0.39
COMMD4-205ENST00000562310 TFCP2L1Q9NZI6 479 aa17.51■□□□□ 0.39
COMMD4-205ENST00000562310 RBM19Q9Y4C8 960 aaKnown RBP17.51■□□□□ 0.39
COMMD4-205ENST00000562310 SPEF2Q9C093 1822 aa17.51■□□□□ 0.39
COMMD4-205ENST00000562310 TFCP2Q12800 502 aa17.5■□□□□ 0.39
COMMD4-205ENST00000562310 ZNF827Q17R98 1081 aa17.5■□□□□ 0.39
COMMD4-205ENST00000562310 ERFEQ4G0M1 354 aa17.5■□□□□ 0.39
COMMD4-205ENST00000562310 TNNI3KQ59H18 835 aa17.5■□□□□ 0.39
COMMD4-205ENST00000562310 ECHDC1Q9NTX5 307 aa17.5■□□□□ 0.39
COMMD4-205ENST00000562310 FPGT-TNNI3KV9GXZ4 949 aa17.5■□□□□ 0.39
COMMD4-205ENST00000562310 EP400Q96L91 3159 aa17.5■□□□□ 0.39
COMMD4-205ENST00000562310 GLRX3O76003 335 aaKnown RBP17.49■□□□□ 0.39
COMMD4-205ENST00000562310 GYS1P13807 737 aa17.49■□□□□ 0.39
COMMD4-205ENST00000562310 BAG6P46379 1132 aa17.49■□□□□ 0.39
COMMD4-205ENST00000562310 SF3B3Q15393 1217 aaKnown RBP17.49■□□□□ 0.39
COMMD4-205ENST00000562310 ZNF594Q96JF6 807 aaPredicted RBP17.49■□□□□ 0.39
COMMD4-205ENST00000562310 ABCC12Q96J65 1359 aa17.49■□□□□ 0.39
COMMD4-205ENST00000562310 ARAP2Q8WZ64 1704 aa17.49■□□□□ 0.39
COMMD4-205ENST00000562310 NFIXQ14938 502 aa17.48■□□□□ 0.39
COMMD4-205ENST00000562310 CASC1Q6TDU7 716 aa17.48■□□□□ 0.39
COMMD4-205ENST00000562310 EAF2Q96CJ1 260 aaPredicted RBP17.48■□□□□ 0.39
COMMD4-205ENST00000562310 CCDC85AQ96PX6 553 aaPredicted RBP17.48■□□□□ 0.39
COMMD4-205ENST00000562310 CAMKK2Q96RR4 588 aa17.48■□□□□ 0.39
COMMD4-205ENST00000562310 UPF2Q9HAU5 1272 aaKnown RBP17.48■□□□□ 0.39
COMMD4-205ENST00000562310 CEP126Q9P2H0 1117 aa17.48■□□□□ 0.39
COMMD4-205ENST00000562310 AKAP2Q9Y2D5 859 aa17.48■□□□□ 0.39
COMMD4-205ENST00000562310 TNRC6CQ9HCJ0 1690 aaKnown RBP17.48■□□□□ 0.39
COMMD4-205ENST00000562310 SDSP20132 328 aa17.47■□□□□ 0.39
COMMD4-205ENST00000562310 LRRC24Q50LG9 513 aa17.47■□□□□ 0.39
COMMD4-205ENST00000562310 PI4K2BQ8TCG2 481 aa17.47■□□□□ 0.39
COMMD4-205ENST00000562310 CDC5LQ99459 802 aaKnown RBP17.47■□□□□ 0.39
COMMD4-205ENST00000562310 A0A1B0GUL6 1792 aa17.47■□□□□ 0.39
COMMD4-205ENST00000562310 NRXN2Q9P2S2 1712 aa17.47■□□□□ 0.39
COMMD4-205ENST00000562310 NPHP1O15259 732 aa17.46■□□□□ 0.39
COMMD4-205ENST00000562310 LDHAL6AQ6ZMR3 332 aa17.46■□□□□ 0.39
COMMD4-205ENST00000562310 CNBD1Q8NA66 436 aa17.46■□□□□ 0.39
COMMD4-205ENST00000562310 CNNM1Q9NRU3 951 aa17.46■□□□□ 0.39
COMMD4-205ENST00000562310 MROH5Q6ZUA9 1318 aa17.46■□□□□ 0.38
COMMD4-205ENST00000562310 IGHMBP2P38935 993 aaKnown RBP17.45■□□□□ 0.38
COMMD4-205ENST00000562310 TSHZ3Q63HK5 1081 aa17.45■□□□□ 0.38
COMMD4-205ENST00000562310 NLRP3Q96P20 1036 aa17.45■□□□□ 0.38
COMMD4-205ENST00000562310 PUS3Q9BZE2 481 aaKnown RBP17.45■□□□□ 0.38
COMMD4-205ENST00000562310 STK32BQ9NY57 414 aa17.45■□□□□ 0.38
COMMD4-205ENST00000562310 RIPOR2Q9Y4F9 1068 aa17.45■□□□□ 0.38
COMMD4-205ENST00000562310 TM4SF1P30408 202 aa17.44■□□□□ 0.38
COMMD4-205ENST00000562310 ST5P78524 1137 aa17.44■□□□□ 0.38
COMMD4-205ENST00000562310 EN1Q05925 392 aaPredicted RBP17.44■□□□□ 0.38
COMMD4-205ENST00000562310 METTL24Q5JXM2 366 aa17.44■□□□□ 0.38
COMMD4-205ENST00000562310 TBC1D9Q6ZT07 1266 aa17.44■□□□□ 0.38
COMMD4-205ENST00000562310 CCDC125Q86Z20 511 aa17.44■□□□□ 0.38
COMMD4-205ENST00000562310 CNTROBQ8N137 903 aa17.44■□□□□ 0.38
COMMD4-205ENST00000562310 NLGN1Q8N2Q7 840 aa17.44■□□□□ 0.38
COMMD4-205ENST00000562310 MPHOSPH8Q99549 860 aa17.44■□□□□ 0.38
COMMD4-205ENST00000562310 CCDC8Q9H0W5 538 aaPredicted RBP17.44■□□□□ 0.38
COMMD4-205ENST00000562310 DBNLQ9UJU6 430 aaKnown RBP17.44■□□□□ 0.38
COMMD4-205ENST00000562310 TRIM6-TRIM34B2RNG4 842 aa17.43■□□□□ 0.38
COMMD4-205ENST00000562310 EZH2Q15910 746 aaKnown RBP17.43■□□□□ 0.38
COMMD4-205ENST00000562310 COL23A1Q86Y22 540 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms