RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 KIF3BO15066 747 aa8.84□□□□□ -0.99
UBR1-203ENST00000562173 ATP2B4P23634 1241 aa8.84□□□□□ -0.99
UBR1-203ENST00000562173 LTKP29376 864 aa8.84□□□□□ -0.99
UBR1-203ENST00000562173 NBPF1Q3BBV0 1214 aa8.84□□□□□ -0.99
UBR1-203ENST00000562173 C4orf17Q53FE4 359 aa8.84□□□□□ -0.99
UBR1-203ENST00000562173 HOMEZQ8IX15 550 aa8.84□□□□□ -0.99
UBR1-203ENST00000562173 COL26A1Q96A83 441 aa8.84□□□□□ -0.99
UBR1-203ENST00000562173 ZDHHC3Q9NYG2 299 aa8.84□□□□□ -0.99
UBR1-203ENST00000562173 CXXC1Q9P0U4 656 aaPredicted RBP8.84□□□□□ -0.99
UBR1-203ENST00000562173 STK17AQ9UEE5 414 aa8.84□□□□□ -0.99
UBR1-203ENST00000562173 CDK11AQ9UQ88 783 aaPredicted RBP8.84□□□□□ -0.99
UBR1-203ENST00000562173 MAP3K1Q13233 1512 aa8.84□□□□□ -0.99
UBR1-203ENST00000562173 PHLPP1O60346 1717 aa8.83□□□□□ -1
UBR1-203ENST00000562173 A0A1B0GTH6 734 aa8.83□□□□□ -1
UBR1-203ENST00000562173 C21orf2O43822 256 aa8.83□□□□□ -1
UBR1-203ENST00000562173 PPP1R12BO60237 982 aaPredicted RBP8.83□□□□□ -1
UBR1-203ENST00000562173 PRICKLE2Q7Z3G6 844 aa8.83□□□□□ -1
UBR1-203ENST00000562173 SCG3Q8WXD2 468 aaKnown RBP8.83□□□□□ -1
UBR1-203ENST00000562173 TRAIPQ9BWF2 469 aa8.83□□□□□ -1
UBR1-203ENST00000562173 DYRK1BQ9Y463 629 aa8.83□□□□□ -1
UBR1-203ENST00000562173 USP3Q9Y6I4 520 aa8.83□□□□□ -1
UBR1-203ENST00000562173 ATAD2Q6PL18 1390 aa8.83□□□□□ -1
UBR1-203ENST00000562173 PIK3C2BO00750 1634 aa8.83□□□□□ -1
UBR1-203ENST00000562173 CCDC18Q5T9S5 1454 aa8.83□□□□□ -1
UBR1-203ENST00000562173 ABCC3O15438 1527 aa8.82□□□□□ -1
UBR1-203ENST00000562173 SERTM1A2A2V5 107 aa8.82□□□□□ -1
UBR1-203ENST00000562173 EML1O00423 815 aa8.82□□□□□ -1
UBR1-203ENST00000562173 PLA2G4AP47712 749 aa8.82□□□□□ -1
UBR1-203ENST00000562173 C2orf49Q9BVC5 232 aaPredicted RBP8.82□□□□□ -1
UBR1-203ENST00000562173 CABP1Q9NZU7 370 aa8.82□□□□□ -1
UBR1-203ENST00000562173 CFDP1Q9UEE9 299 aaPredicted RBP8.82□□□□□ -1
UBR1-203ENST00000562173 MIA2Q96PC5 1412 aa8.81□□□□□ -1
UBR1-203ENST00000562173 PRMT3O60678 531 aa8.81□□□□□ -1
UBR1-203ENST00000562173 ANKLE2Q86XL3 938 aa8.81□□□□□ -1
UBR1-203ENST00000562173 SLC35F4A4IF30 521 aa8.8□□□□□ -1
UBR1-203ENST00000562173 PTCD1O75127 700 aaKnown RBP8.8□□□□□ -1
UBR1-203ENST00000562173 SSFA2P28290 1259 aa8.8□□□□□ -1
UBR1-203ENST00000562173 NOS2P35228 1153 aa8.8□□□□□ -1
UBR1-203ENST00000562173 POU4F2Q12837 409 aa8.8□□□□□ -1
UBR1-203ENST00000562173 ZDHHC1Q8WTX9 485 aa8.8□□□□□ -1
UBR1-203ENST00000562173 L3MBTL2Q969R5 705 aa8.8□□□□□ -1
UBR1-203ENST00000562173 TIMMDC1Q9NPL8 285 aa8.8□□□□□ -1
UBR1-203ENST00000562173 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.8□□□□□ -1
UBR1-203ENST00000562173 DHX29Q7Z478 1369 aaKnown RBP8.8□□□□□ -1
UBR1-203ENST00000562173 CCNB3Q8WWL7 1395 aa8.8□□□□□ -1
UBR1-203ENST00000562173 ERVK-7P63135 1459 aa8.8□□□□□ -1
UBR1-203ENST00000562173 CAMSAP2Q08AD1 1489 aa8.8□□□□□ -1
UBR1-203ENST00000562173 FYCO1Q9BQS8 1478 aa8.8□□□□□ -1
UBR1-203ENST00000562173 BRD1O95696 1058 aa8.79□□□□□ -1
UBR1-203ENST00000562173 TATP17735 454 aaPredicted RBP8.79□□□□□ -1
UBR1-203ENST00000562173 FKBP5Q13451 457 aaPredicted RBP8.79□□□□□ -1
UBR1-203ENST00000562173 LBRQ14739 615 aaKnown RBP8.79□□□□□ -1
UBR1-203ENST00000562173 C1orf53Q5VUE5 145 aa8.79□□□□□ -1
UBR1-203ENST00000562173 CCDC155Q8N6L0 562 aa8.79□□□□□ -1
UBR1-203ENST00000562173 VTI1AQ96AJ9 217 aa8.79□□□□□ -1
UBR1-203ENST00000562173 SLAIN2Q9P270 581 aa8.79□□□□□ -1
UBR1-203ENST00000562173 ZNF232Q9UNY5 417 aa8.79□□□□□ -1
UBR1-203ENST00000562173 MTMR7Q9Y216 660 aa8.79□□□□□ -1
UBR1-203ENST00000562173 COL16A1Q07092 1604 aaPredicted RBP8.79□□□□□ -1
UBR1-203ENST00000562173 FAM135AQ9P2D6 1515 aa8.79□□□□□ -1
UBR1-203ENST00000562173 KIAA1107Q9UPP5 1409 aa8.79□□□□□ -1
UBR1-203ENST00000562173 SENP3-EIF4A1A0A087X0R7 540 aa8.78□□□□□ -1
UBR1-203ENST00000562173 PATL2C9JE40 543 aaKnown RBP8.78□□□□□ -1
UBR1-203ENST00000562173 RHOQP17081 205 aa8.78□□□□□ -1
UBR1-203ENST00000562173 HIF1AQ16665 826 aa8.78□□□□□ -1
UBR1-203ENST00000562173 TBCELQ5QJ74 424 aa8.78□□□□□ -1
UBR1-203ENST00000562173 GPR161Q8N6U8 529 aaKnown RBP8.78□□□□□ -1
UBR1-203ENST00000562173 ZSCAN1Q8NBB4 408 aa8.78□□□□□ -1
UBR1-203ENST00000562173 GMCL1Q96IK5 515 aa8.78□□□□□ -1
UBR1-203ENST00000562173 TMEM94Q12767 1356 aa8.77□□□□□ -1.01
UBR1-203ENST00000562173 PDIA4P13667 645 aaKnown RBP8.77□□□□□ -1.01
UBR1-203ENST00000562173 ATP4AP20648 1035 aa8.77□□□□□ -1.01
UBR1-203ENST00000562173 MYO19Q96H55 970 aa8.77□□□□□ -1.01
UBR1-203ENST00000562173 PRIMPOLQ96LW4 560 aa8.77□□□□□ -1.01
UBR1-203ENST00000562173 CRISPLD1Q9H336 500 aa8.77□□□□□ -1.01
UBR1-203ENST00000562173 WASHC2CQ9Y4E1 1318 aa8.77□□□□□ -1.01
UBR1-203ENST00000562173 F11P03951 625 aa8.76□□□□□ -1.01
UBR1-203ENST00000562173 KRT76Q01546 638 aa8.76□□□□□ -1.01
UBR1-203ENST00000562173 RTN1Q16799 776 aa8.76□□□□□ -1.01
UBR1-203ENST00000562173 NANOS1Q8WY41 292 aaKnown RBP8.76□□□□□ -1.01
UBR1-203ENST00000562173 SCAF11Q99590 1463 aaKnown RBP8.76□□□□□ -1.01
UBR1-203ENST00000562173 NLRP1Q9C000 1473 aa8.76□□□□□ -1.01
UBR1-203ENST00000562173 ITGA6P23229 1130 aa8.75□□□□□ -1.01
UBR1-203ENST00000562173 PHKA2P46019 1235 aa8.75□□□□□ -1.01
UBR1-203ENST00000562173 SLC26A8Q96RN1 970 aa8.75□□□□□ -1.01
UBR1-203ENST00000562173 CCDC141Q6ZP82 1450 aa8.75□□□□□ -1.01
UBR1-203ENST00000562173 PLEKHH2Q8IVE3 1493 aa8.75□□□□□ -1.01
UBR1-203ENST00000562173 ARHGAP23Q9P227 1491 aa8.75□□□□□ -1.01
UBR1-203ENST00000562173 MAST1Q9Y2H9 1570 aa8.74□□□□□ -1.01
UBR1-203ENST00000562173 H7C1W4 665 aa8.74□□□□□ -1.01
UBR1-203ENST00000562173 MSX1P28360 303 aa8.74□□□□□ -1.01
UBR1-203ENST00000562173 KCNA1Q09470 495 aa8.74□□□□□ -1.01
UBR1-203ENST00000562173 PHLDB3Q6NSJ2 640 aa8.74□□□□□ -1.01
UBR1-203ENST00000562173 THEMISQ8N1K5 641 aaPredicted RBP8.74□□□□□ -1.01
UBR1-203ENST00000562173 PHACTR1Q9C0D0 580 aa8.74□□□□□ -1.01
UBR1-203ENST00000562173 EHBP1L1Q8N3D4 1523 aa8.74□□□□□ -1.01
UBR1-203ENST00000562173 MTUS2Q5JR59 1369 aa8.73□□□□□ -1.01
UBR1-203ENST00000562173 CHD2O14647 1828 aaKnown RBP8.73□□□□□ -1.01
UBR1-203ENST00000562173 TET3O43151 1660 aa8.73□□□□□ -1.01
UBR1-203ENST00000562173 TXNDC2Q86VQ3 553 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms