RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 IGKV5-2P06315 115 aa12.15□□□□□ -0.46
NSMCE1-203ENST00000562039 FKBP5Q13451 457 aaPredicted RBP12.15□□□□□ -0.46
NSMCE1-203ENST00000562039 EAPPQ56P03 285 aaPredicted RBP12.15□□□□□ -0.46
NSMCE1-203ENST00000562039 DPP8Q6V1X1 898 aaPredicted RBP12.15□□□□□ -0.46
NSMCE1-203ENST00000562039 MPNDQ8N594 471 aa12.15□□□□□ -0.46
NSMCE1-203ENST00000562039 ZBTB38Q8NAP3 1195 aaPredicted RBP12.15□□□□□ -0.46
NSMCE1-203ENST00000562039 JDP2Q8WYK2 163 aa12.15□□□□□ -0.46
NSMCE1-203ENST00000562039 PSMD1Q99460 953 aa12.15□□□□□ -0.46
NSMCE1-203ENST00000562039 F6X3S4 739 aa12.14□□□□□ -0.47
NSMCE1-203ENST00000562039 RIMBP2O15034 1052 aa12.14□□□□□ -0.47
NSMCE1-203ENST00000562039 FLIIQ13045 1269 aa12.14□□□□□ -0.47
NSMCE1-203ENST00000562039 TRIM28Q13263 835 aaKnown RBP12.14□□□□□ -0.47
NSMCE1-203ENST00000562039 CC2D2BQ6DHV5 1058 aa12.14□□□□□ -0.47
NSMCE1-203ENST00000562039 BBOX1O75936 387 aa12.13□□□□□ -0.47
NSMCE1-203ENST00000562039 PCCAP05165 728 aaPredicted RBP12.13□□□□□ -0.47
NSMCE1-203ENST00000562039 EIF6P56537 245 aaKnown RBP12.13□□□□□ -0.47
NSMCE1-203ENST00000562039 GPSM2P81274 684 aa12.13□□□□□ -0.47
NSMCE1-203ENST00000562039 NEXNQ0ZGT2 675 aa12.13□□□□□ -0.47
NSMCE1-203ENST00000562039 SF3B3Q15393 1217 aaKnown RBP12.13□□□□□ -0.47
NSMCE1-203ENST00000562039 SP8Q8IXZ3 490 aa12.13□□□□□ -0.47
NSMCE1-203ENST00000562039 NIM1KQ8IY84 436 aa12.13□□□□□ -0.47
NSMCE1-203ENST00000562039 CCDC191Q8NCU4 936 aa12.13□□□□□ -0.47
NSMCE1-203ENST00000562039 SMC1BQ8NDV3 1235 aa12.13□□□□□ -0.47
NSMCE1-203ENST00000562039 MYH16Q9H6N6 1097 aa12.13□□□□□ -0.47
NSMCE1-203ENST00000562039 CLEC11AQ9Y240 323 aa12.13□□□□□ -0.47
NSMCE1-203ENST00000562039 WDR90Q96KV7 1748 aa12.12□□□□□ -0.47
NSMCE1-203ENST00000562039 NEURL1BA8MQ27 555 aa12.12□□□□□ -0.47
NSMCE1-203ENST00000562039 FZD9O00144 591 aa12.12□□□□□ -0.47
NSMCE1-203ENST00000562039 CDCA7LQ96GN5 454 aa12.12□□□□□ -0.47
NSMCE1-203ENST00000562039 NSFL1CQ9UNZ2 370 aaKnown RBP12.12□□□□□ -0.47
NSMCE1-203ENST00000562039 C6orf229H3BNL8 230 aa12.11□□□□□ -0.47
NSMCE1-203ENST00000562039 PDE8AO60658 829 aa12.11□□□□□ -0.47
NSMCE1-203ENST00000562039 RAD17O75943 681 aa12.11□□□□□ -0.47
NSMCE1-203ENST00000562039 FSTL1Q12841 308 aa12.11□□□□□ -0.47
NSMCE1-203ENST00000562039 NCBP3Q53F19 620 aaKnown RBP12.11□□□□□ -0.47
NSMCE1-203ENST00000562039 UBE3BQ7Z3V4 1068 aa12.11□□□□□ -0.47
NSMCE1-203ENST00000562039 DNAAF4Q8WXU2 420 aa12.11□□□□□ -0.47
NSMCE1-203ENST00000562039 CHMP4AQ9BY43 222 aa12.11□□□□□ -0.47
NSMCE1-203ENST00000562039 TAF1DQ9H5J8 278 aaPredicted RBP12.11□□□□□ -0.47
NSMCE1-203ENST00000562039 HACL1Q9UJ83 578 aa12.11□□□□□ -0.47
NSMCE1-203ENST00000562039 APLP1P51693 650 aa12.1□□□□□ -0.47
NSMCE1-203ENST00000562039 RPS8P62241 208 aaKnown RBP12.1□□□□□ -0.47
NSMCE1-203ENST00000562039 DOK7Q18PE1 504 aa12.1□□□□□ -0.47
NSMCE1-203ENST00000562039 CCDC152Q4G0S7 254 aa12.1□□□□□ -0.47
NSMCE1-203ENST00000562039 SLC4A10Q6U841 1118 aa12.1□□□□□ -0.47
NSMCE1-203ENST00000562039 DBNDD1Q9H9R9 158 aa12.1□□□□□ -0.47
NSMCE1-203ENST00000562039 POLLQ9UGP5 575 aa12.1□□□□□ -0.47
NSMCE1-203ENST00000562039 ZNF521Q96K83 1311 aa12.1□□□□□ -0.47
NSMCE1-203ENST00000562039 IQCA1LA6NCM1 817 aa12.09□□□□□ -0.47
NSMCE1-203ENST00000562039 WTIPA6NIX2 430 aaPredicted RBP12.09□□□□□ -0.47
NSMCE1-203ENST00000562039 EPHX2P34913 555 aa12.09□□□□□ -0.47
NSMCE1-203ENST00000562039 EPS15P42566 896 aa12.09□□□□□ -0.47
NSMCE1-203ENST00000562039 CTSWP56202 376 aa12.09□□□□□ -0.47
NSMCE1-203ENST00000562039 GPC2Q8N158 579 aa12.09□□□□□ -0.47
NSMCE1-203ENST00000562039 SUPT20HQ8NEM7 779 aa12.09□□□□□ -0.47
NSMCE1-203ENST00000562039 BCL2L13Q9BXK5 485 aa12.09□□□□□ -0.47
NSMCE1-203ENST00000562039 GREM2Q9H772 168 aa12.09□□□□□ -0.47
NSMCE1-203ENST00000562039 CEP350Q5VT06 3117 aa12.08□□□□□ -0.48
NSMCE1-203ENST00000562039 SHTN1A0MZ66 631 aa12.08□□□□□ -0.48
NSMCE1-203ENST00000562039 CXCL9Q07325 125 aa12.08□□□□□ -0.48
NSMCE1-203ENST00000562039 GCKRQ14397 625 aa12.08□□□□□ -0.48
NSMCE1-203ENST00000562039 GRIPAP1Q4V328 841 aa12.08□□□□□ -0.48
NSMCE1-203ENST00000562039 MAP1SQ66K74 1059 aaPredicted RBP12.08□□□□□ -0.48
NSMCE1-203ENST00000562039 CHADLQ6NUI6 762 aa12.08□□□□□ -0.48
NSMCE1-203ENST00000562039 L3MBTL3Q96JM7 780 aaPredicted RBP12.08□□□□□ -0.48
NSMCE1-203ENST00000562039 RTFDC1Q9BY42 306 aaPredicted RBP12.08□□□□□ -0.48
NSMCE1-203ENST00000562039 KCNQ5Q9NR82 932 aa12.08□□□□□ -0.48
NSMCE1-203ENST00000562039 ANKIB1Q9P2G1 1089 aa12.08□□□□□ -0.48
NSMCE1-203ENST00000562039 DUOX1Q9NRD9 1551 aa12.08□□□□□ -0.48
NSMCE1-203ENST00000562039 CDHR2Q9BYE9 1310 aa12.08□□□□□ -0.48
NSMCE1-203ENST00000562039 YDJCA8MPS7 323 aa12.07□□□□□ -0.48
NSMCE1-203ENST00000562039 H7C1W4 665 aa12.07□□□□□ -0.48
NSMCE1-203ENST00000562039 UFL1O94874 794 aa12.07□□□□□ -0.48
NSMCE1-203ENST00000562039 LMOD1P29536 600 aaPredicted RBP12.07□□□□□ -0.48
NSMCE1-203ENST00000562039 GMPSP49915 693 aaPredicted RBP12.07□□□□□ -0.48
NSMCE1-203ENST00000562039 SCNN1DP51172 638 aa12.07□□□□□ -0.48
NSMCE1-203ENST00000562039 FMR1Q06787 632 aaKnown RBP eCLIP12.07□□□□□ -0.48
NSMCE1-203ENST00000562039 KIAA2012Q0VF49 1180 aa12.07□□□□□ -0.48
NSMCE1-203ENST00000562039 LTBP1Q14766 1721 aa12.07□□□□□ -0.48
NSMCE1-203ENST00000562039 WASHC4Q2M389 1173 aa12.07□□□□□ -0.48
NSMCE1-203ENST00000562039 ANKRD18AQ8IVF6 992 aa12.07□□□□□ -0.48
NSMCE1-203ENST00000562039 MIER1Q8N108 512 aa12.07□□□□□ -0.48
NSMCE1-203ENST00000562039 TTLL11Q8NHH1 800 aa12.07□□□□□ -0.48
NSMCE1-203ENST00000562039 TBC1D16Q8TBP0 767 aa12.07□□□□□ -0.48
NSMCE1-203ENST00000562039 ZNRF3Q9ULT6 936 aa12.07□□□□□ -0.48
NSMCE1-203ENST00000562039 ZBTB12Q9Y330 459 aaPredicted RBP12.07□□□□□ -0.48
NSMCE1-203ENST00000562039 CHMP3Q9Y3E7 222 aa12.07□□□□□ -0.48
NSMCE1-203ENST00000562039 SPEF2Q9C093 1822 aa12.07□□□□□ -0.48
NSMCE1-203ENST00000562039 SLFN5Q08AF3 891 aa12.06□□□□□ -0.48
NSMCE1-203ENST00000562039 FAM161AQ3B820 660 aa12.06□□□□□ -0.48
NSMCE1-203ENST00000562039 CIAPIN1Q6FI81 312 aa12.06□□□□□ -0.48
NSMCE1-203ENST00000562039 TMC4Q7Z404 712 aa12.06□□□□□ -0.48
NSMCE1-203ENST00000562039 LINS1Q8NG48 757 aa12.06□□□□□ -0.48
NSMCE1-203ENST00000562039 SCN4AP35499 1836 aa12.05□□□□□ -0.48
NSMCE1-203ENST00000562039 G3V3G9 751 aa12.05□□□□□ -0.48
NSMCE1-203ENST00000562039 CCER2I3L3R5 266 aa12.05□□□□□ -0.48
NSMCE1-203ENST00000562039 ECE2O60344 883 aa12.05□□□□□ -0.48
NSMCE1-203ENST00000562039 HSP90B1P14625 803 aaKnown RBP12.05□□□□□ -0.48
NSMCE1-203ENST00000562039 CASP7P55210 303 aa12.05□□□□□ -0.48
NSMCE1-203ENST00000562039 BEND3Q5T5X7 828 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms