RNA–Protein interactions for RNA: ENST00000561956.1

AC009054.2-201, humanhuman

TSL 3 BASIC

Gene AC009054.2, Length 374 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009054.2-201ENST00000561956 SKAP1Q86WV1 359 aa13.46□□□□□ -0.25
AC009054.2-201ENST00000561956 NBPF5PQ86XG9 351 aaPredicted RBP13.46□□□□□ -0.25
AC009054.2-201ENST00000561956 NUTM1Q86Y26 1132 aa13.46□□□□□ -0.25
AC009054.2-201ENST00000561956 TTLL11Q8NHH1 800 aa13.46□□□□□ -0.25
AC009054.2-201ENST00000561956 COPRSQ9NQ92 184 aa13.46□□□□□ -0.25
AC009054.2-201ENST00000561956 RIC1Q4ADV7 1423 aa13.46□□□□□ -0.26
AC009054.2-201ENST00000561956 NRXN2Q9P2S2 1712 aa13.45□□□□□ -0.26
AC009054.2-201ENST00000561956 RAB11FIP3O75154 756 aa13.45□□□□□ -0.26
AC009054.2-201ENST00000561956 PTPN12Q05209 780 aaKnown RBP13.45□□□□□ -0.26
AC009054.2-201ENST00000561956 FAM161AQ3B820 660 aa13.45□□□□□ -0.26
AC009054.2-201ENST00000561956 HSP90AB4PQ58FF6 505 aa13.45□□□□□ -0.26
AC009054.2-201ENST00000561956 SLC10A5Q5PT55 438 aa13.45□□□□□ -0.26
AC009054.2-201ENST00000561956 ANKRD45Q5TZF3 282 aa13.45□□□□□ -0.26
AC009054.2-201ENST00000561956 PA2G4Q9UQ80 394 aaKnown RBP13.45□□□□□ -0.26
AC009054.2-201ENST00000561956 CHMP3Q9Y3E7 222 aa13.45□□□□□ -0.26
AC009054.2-201ENST00000561956 LRP5O75197 1615 aa13.45□□□□□ -0.26
AC009054.2-201ENST00000561956 RTL9Q8NET4 1388 aa13.45□□□□□ -0.26
AC009054.2-201ENST00000561956 TNRC6CQ9HCJ0 1690 aaKnown RBP13.44□□□□□ -0.26
AC009054.2-201ENST00000561956 POLRMTO00411 1230 aaKnown RBP13.44□□□□□ -0.26
AC009054.2-201ENST00000561956 PDE4AP27815 886 aa13.44□□□□□ -0.26
AC009054.2-201ENST00000561956 HOXD11P31277 338 aaPredicted RBP13.44□□□□□ -0.26
AC009054.2-201ENST00000561956 DDR1Q08345 913 aa13.44□□□□□ -0.26
AC009054.2-201ENST00000561956 TPTE2Q6XPS3 522 aa13.44□□□□□ -0.26
AC009054.2-201ENST00000561956 NLGN1Q8N2Q7 840 aa13.44□□□□□ -0.26
AC009054.2-201ENST00000561956 KLHDC4Q8TBB5 520 aa13.44□□□□□ -0.26
AC009054.2-201ENST00000561956 LNPKQ9C0E8 428 aa13.44□□□□□ -0.26
AC009054.2-201ENST00000561956 APBB1O00213 710 aa13.43□□□□□ -0.26
AC009054.2-201ENST00000561956 GTF2E1P29083 439 aaPredicted RBP13.43□□□□□ -0.26
AC009054.2-201ENST00000561956 CCDC57Q2TAC2 916 aa13.43□□□□□ -0.26
AC009054.2-201ENST00000561956 CNBD1Q8NA66 436 aa13.43□□□□□ -0.26
AC009054.2-201ENST00000561956 LRRCC1Q9C099 1032 aa13.43□□□□□ -0.26
AC009054.2-201ENST00000561956 GREM2Q9H772 168 aa13.43□□□□□ -0.26
AC009054.2-201ENST00000561956 SMARCA5O60264 1052 aaPredicted RBP13.42□□□□□ -0.26
AC009054.2-201ENST00000561956 SERPINB2P05120 415 aa13.42□□□□□ -0.26
AC009054.2-201ENST00000561956 PRKCSHP14314 528 aaPredicted RBP13.42□□□□□ -0.26
AC009054.2-201ENST00000561956 G3BP1Q13283 466 aaKnown RBP eCLIP13.42□□□□□ -0.26
AC009054.2-201ENST00000561956 IFIT5Q13325 482 aaKnown RBP13.42□□□□□ -0.26
AC009054.2-201ENST00000561956 SF3B3Q15393 1217 aaKnown RBP13.42□□□□□ -0.26
AC009054.2-201ENST00000561956 CCDC152Q4G0S7 254 aa13.42□□□□□ -0.26
AC009054.2-201ENST00000561956 PRR5LQ6MZQ0 368 aa13.42□□□□□ -0.26
AC009054.2-201ENST00000561956 ERC1Q8IUD2 1116 aa13.42□□□□□ -0.26
AC009054.2-201ENST00000561956 RHPN1Q8TCX5 695 aa13.42□□□□□ -0.26
AC009054.2-201ENST00000561956 KIF1BPQ96EK5 621 aa13.42□□□□□ -0.26
AC009054.2-201ENST00000561956 CCDC85AQ96PX6 553 aaPredicted RBP13.42□□□□□ -0.26
AC009054.2-201ENST00000561956 ZBTB47Q9UFB7 747 aaPredicted RBP13.42□□□□□ -0.26
AC009054.2-201ENST00000561956 ANKRD18BA2A2Z9 1011 aa13.41□□□□□ -0.26
AC009054.2-201ENST00000561956 ITGA6P23229 1130 aa13.41□□□□□ -0.26
AC009054.2-201ENST00000561956 RGS3P49796 1198 aa13.41□□□□□ -0.26
AC009054.2-201ENST00000561956 OS9Q13438 667 aaPredicted RBP13.41□□□□□ -0.26
AC009054.2-201ENST00000561956 C3orf67Q6ZVT6 689 aa13.41□□□□□ -0.26
AC009054.2-201ENST00000561956 SIL1Q9H173 461 aa13.41□□□□□ -0.26
AC009054.2-201ENST00000561956 FBXO3Q9UK99 471 aa13.41□□□□□ -0.26
AC009054.2-201ENST00000561956 CIAO1O76071 339 aa13.4□□□□□ -0.26
AC009054.2-201ENST00000561956 SASH1O94885 1247 aa13.4□□□□□ -0.26
AC009054.2-201ENST00000561956 MMP10P09238 476 aa13.4□□□□□ -0.26
AC009054.2-201ENST00000561956 MSL1Q68DK7 614 aa13.4□□□□□ -0.26
AC009054.2-201ENST00000561956 ZNF594Q96JF6 807 aaPredicted RBP13.4□□□□□ -0.26
AC009054.2-201ENST00000561956 ANKRD31Q8N7Z5 1873 aa13.4□□□□□ -0.26
AC009054.2-201ENST00000561956 SPEF2Q9C093 1822 aa13.39□□□□□ -0.27
AC009054.2-201ENST00000561956 EYA2O00167 538 aa13.39□□□□□ -0.27
AC009054.2-201ENST00000561956 NPHP1O15259 732 aa13.39□□□□□ -0.27
AC009054.2-201ENST00000561956 IL15P40933 162 aaPredicted RBP13.39□□□□□ -0.27
AC009054.2-201ENST00000561956 ST5P78524 1137 aa13.39□□□□□ -0.27
AC009054.2-201ENST00000561956 TAF7LQ5H9L4 462 aa13.39□□□□□ -0.27
AC009054.2-201ENST00000561956 ATG9AQ7Z3C6 839 aa13.39□□□□□ -0.27
AC009054.2-201ENST00000561956 PELP1Q8IZL8 1130 aaKnown RBP13.39□□□□□ -0.27
AC009054.2-201ENST00000561956 CCDC24Q8N4L8 307 aa13.39□□□□□ -0.27
AC009054.2-201ENST00000561956 NLRP3Q96P20 1036 aa13.39□□□□□ -0.27
AC009054.2-201ENST00000561956 COL4A1P02462 1669 aa13.39□□□□□ -0.27
AC009054.2-201ENST00000561956 SALL3Q9BXA9 1300 aa13.39□□□□□ -0.27
AC009054.2-201ENST00000561956 LRRC24Q50LG9 513 aa13.38□□□□□ -0.27
AC009054.2-201ENST00000561956 SLC16A10Q8TF71 515 aa13.38□□□□□ -0.27
AC009054.2-201ENST00000561956 PUS3Q9BZE2 481 aaKnown RBP13.38□□□□□ -0.27
AC009054.2-201ENST00000561956 PDGFDQ9GZP0 370 aaPredicted RBP13.38□□□□□ -0.27
AC009054.2-201ENST00000561956 IL1RAPL2Q9NP60 686 aa13.38□□□□□ -0.27
AC009054.2-201ENST00000561956 SEC31BQ9NQW1 1179 aa13.38□□□□□ -0.27
AC009054.2-201ENST00000561956 PARP3Q9Y6F1 533 aa13.38□□□□□ -0.27
AC009054.2-201ENST00000561956 PLEKHM2Q8IWE5 1019 aa13.37□□□□□ -0.27
AC009054.2-201ENST00000561956 C16orf71Q8IYS4 520 aaPredicted RBP13.37□□□□□ -0.27
AC009054.2-201ENST00000561956 OTUD7AQ8TE49 926 aaPredicted RBP13.37□□□□□ -0.27
AC009054.2-201ENST00000561956 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.37□□□□□ -0.27
AC009054.2-201ENST00000561956 TAF1P21675 1872 aa13.37□□□□□ -0.27
AC009054.2-201ENST00000561956 A0A1B0GUL6 1792 aa13.36□□□□□ -0.27
AC009054.2-201ENST00000561956 KLRG2A4D1S0 409 aaPredicted RBP13.36□□□□□ -0.27
AC009054.2-201ENST00000561956 TFCP2Q12800 502 aa13.36□□□□□ -0.27
AC009054.2-201ENST00000561956 CRY2Q49AN0 593 aa13.36□□□□□ -0.27
AC009054.2-201ENST00000561956 LDHAL6AQ6ZMR3 332 aa13.36□□□□□ -0.27
AC009054.2-201ENST00000561956 ILDR2Q71H61 639 aa13.36□□□□□ -0.27
AC009054.2-201ENST00000561956 CLASRPQ8N2M8 674 aaKnown RBP13.36□□□□□ -0.27
AC009054.2-201ENST00000561956 CDC5LQ99459 802 aaKnown RBP13.36□□□□□ -0.27
AC009054.2-201ENST00000561956 RIPOR2Q9Y4F9 1068 aa13.36□□□□□ -0.27
AC009054.2-201ENST00000561956 ZNF609O15014 1411 aa13.36□□□□□ -0.27
AC009054.2-201ENST00000561956 IGHMBP2P38935 993 aaKnown RBP13.35□□□□□ -0.27
AC009054.2-201ENST00000561956 BRIP1Q9BX63 1249 aa13.35□□□□□ -0.27
AC009054.2-201ENST00000561956 OSBPL3Q9H4L5 887 aa13.35□□□□□ -0.27
AC009054.2-201ENST00000561956 GPR108Q9NPR9 543 aa13.35□□□□□ -0.27
AC009054.2-201ENST00000561956 TAOK2Q9UL54 1235 aa13.35□□□□□ -0.27
AC009054.2-201ENST00000561956 COL11A2P13942 1736 aaPredicted RBP13.35□□□□□ -0.27
AC009054.2-201ENST00000561956 MX1P20591 662 aa13.34□□□□□ -0.27
AC009054.2-201ENST00000561956 TNNI3KQ59H18 835 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms