RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 DNM1Q05193 864 aaKnown RBP13.06□□□□□ -0.32
NEIL1-202ENST00000561643 ANKRD13DQ6ZTN6 518 aa13.06□□□□□ -0.32
NEIL1-202ENST00000561643 FAM184AQ8NB25 1140 aa13.06□□□□□ -0.32
NEIL1-202ENST00000561643 KDM6AO15550 1401 aaPredicted RBP13.06□□□□□ -0.32
NEIL1-202ENST00000561643 C1orf167Q5SNV9 1468 aa13.05□□□□□ -0.32
NEIL1-202ENST00000561643 BLOC1S2Q6QNY1 142 aa13.05□□□□□ -0.32
NEIL1-202ENST00000561643 IFNL2Q8IZJ0 200 aa13.05□□□□□ -0.32
NEIL1-202ENST00000561643 ZNF710Q8N1W2 664 aa13.05□□□□□ -0.32
NEIL1-202ENST00000561643 TPCN1Q9ULQ1 816 aa13.05□□□□□ -0.32
NEIL1-202ENST00000561643 LETM1O95202 739 aaPredicted RBP13.05□□□□□ -0.32
NEIL1-202ENST00000561643 C19orf44Q9H6X5 657 aa13.05□□□□□ -0.32
NEIL1-202ENST00000561643 CAMTA1Q9Y6Y1 1673 aa13.05□□□□□ -0.32
NEIL1-202ENST00000561643 SNRPA1P09661 255 aaKnown RBP13.05□□□□□ -0.32
NEIL1-202ENST00000561643 ST3GAL1Q11201 340 aa13.05□□□□□ -0.32
NEIL1-202ENST00000561643 ATP2B3Q16720 1220 aa13.05□□□□□ -0.32
NEIL1-202ENST00000561643 TCEANC2Q96MN5 208 aa13.05□□□□□ -0.32
NEIL1-202ENST00000561643 USP16Q9Y5T5 823 aa13.05□□□□□ -0.32
NEIL1-202ENST00000561643 SIPA1L3O60292 1781 aaPredicted RBP13.05□□□□□ -0.32
NEIL1-202ENST00000561643 LARP1BQ659C4 914 aaKnown RBP13.04□□□□□ -0.32
NEIL1-202ENST00000561643 EDC3Q96F86 508 aaKnown RBP13.04□□□□□ -0.32
NEIL1-202ENST00000561643 MCM5P33992 734 aa13.04□□□□□ -0.32
NEIL1-202ENST00000561643 UBE3BQ7Z3V4 1068 aa13.04□□□□□ -0.32
NEIL1-202ENST00000561643 DDX17Q92841 729 aaKnown RBP13.04□□□□□ -0.32
NEIL1-202ENST00000561643 TRPM3Q9HCF6 1732 aaPredicted RBP13.04□□□□□ -0.32
NEIL1-202ENST00000561643 RGPD5Q99666 1765 aa13.03□□□□□ -0.32
NEIL1-202ENST00000561643 SPDYE4A6NLX3 237 aa13.03□□□□□ -0.32
NEIL1-202ENST00000561643 ZNF589Q86UQ0 364 aaPredicted RBP13.03□□□□□ -0.32
NEIL1-202ENST00000561643 LMTK3Q96Q04 1460 aa13.03□□□□□ -0.32
NEIL1-202ENST00000561643 HCLS1P14317 486 aaPredicted RBP13.03□□□□□ -0.32
NEIL1-202ENST00000561643 ANKRD1Q15327 319 aa13.03□□□□□ -0.32
NEIL1-202ENST00000561643 MYRIPQ8NFW9 859 aa13.03□□□□□ -0.32
NEIL1-202ENST00000561643 SNRKQ9NRH2 765 aa13.03□□□□□ -0.32
NEIL1-202ENST00000561643 ATF3P18847 181 aa13.03□□□□□ -0.32
NEIL1-202ENST00000561643 CDK11BP21127 795 aaKnown RBP13.03□□□□□ -0.32
NEIL1-202ENST00000561643 COL9A3Q14050 684 aaPredicted RBP13.03□□□□□ -0.32
NEIL1-202ENST00000561643 UVSSAQ2YD98 709 aa13.03□□□□□ -0.32
NEIL1-202ENST00000561643 FMNL2Q96PY5 1086 aa13.03□□□□□ -0.32
NEIL1-202ENST00000561643 COPRSQ9NQ92 184 aa13.03□□□□□ -0.32
NEIL1-202ENST00000561643 MED23Q9ULK4 1368 aa13.02□□□□□ -0.32
NEIL1-202ENST00000561643 ATP5J2-PTCD1G3V325 749 aa13.02□□□□□ -0.32
NEIL1-202ENST00000561643 PTCD1O75127 700 aaKnown RBP13.02□□□□□ -0.32
NEIL1-202ENST00000561643 TFCP2Q12800 502 aa13.02□□□□□ -0.32
NEIL1-202ENST00000561643 FERMT3Q86UX7 667 aa13.02□□□□□ -0.32
NEIL1-202ENST00000561643 CABLES1Q8TDN4 633 aa13.02□□□□□ -0.32
NEIL1-202ENST00000561643 DCAF5Q96JK2 942 aa13.02□□□□□ -0.32
NEIL1-202ENST00000561643 GTPBP4Q9BZE4 634 aaKnown RBP13.02□□□□□ -0.32
NEIL1-202ENST00000561643 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.02□□□□□ -0.32
NEIL1-202ENST00000561643 USP25Q9UHP3 1055 aa13.02□□□□□ -0.32
NEIL1-202ENST00000561643 DBNLQ9UJU6 430 aaKnown RBP13.02□□□□□ -0.32
NEIL1-202ENST00000561643 MEGF6O75095 1541 aa13.02□□□□□ -0.33
NEIL1-202ENST00000561643 RPS6KB1P23443 525 aa13.02□□□□□ -0.33
NEIL1-202ENST00000561643 CHRNA2Q15822 529 aa13.02□□□□□ -0.33
NEIL1-202ENST00000561643 TNNI3KQ59H18 835 aa13.02□□□□□ -0.33
NEIL1-202ENST00000561643 HMG20BQ9P0W2 317 aa13.02□□□□□ -0.33
NEIL1-202ENST00000561643 TAF6LQ9Y6J9 622 aa13.02□□□□□ -0.33
NEIL1-202ENST00000561643 FPGT-TNNI3KV9GXZ4 949 aa13.02□□□□□ -0.33
NEIL1-202ENST00000561643 ADAMTS7Q9UKP4 1686 aa13.02□□□□□ -0.33
NEIL1-202ENST00000561643 PDCP20941 246 aa13.01□□□□□ -0.33
NEIL1-202ENST00000561643 PTPN12Q05209 780 aaKnown RBP13.01□□□□□ -0.33
NEIL1-202ENST00000561643 GIMAP6Q6P9H5 292 aa13.01□□□□□ -0.33
NEIL1-202ENST00000561643 DNAJC2Q99543 621 aaKnown RBP13.01□□□□□ -0.33
NEIL1-202ENST00000561643 A0A087WZG4 1122 aa13.01□□□□□ -0.33
NEIL1-202ENST00000561643 KIF20AO95235 890 aa13.01□□□□□ -0.33
NEIL1-202ENST00000561643 ATP5JP18859 108 aa13.01□□□□□ -0.33
NEIL1-202ENST00000561643 CABP4P57796 275 aa13.01□□□□□ -0.33
NEIL1-202ENST00000561643 KIAA2012Q0VF49 1180 aa13.01□□□□□ -0.33
NEIL1-202ENST00000561643 STK3Q13188 491 aa13.01□□□□□ -0.33
NEIL1-202ENST00000561643 CGNQ9P2M7 1197 aaKnown RBP13.01□□□□□ -0.33
NEIL1-202ENST00000561643 NDUFB9Q9Y6M9 179 aa13.01□□□□□ -0.33
NEIL1-202ENST00000561643 C5P01031 1676 aa13.01□□□□□ -0.33
NEIL1-202ENST00000561643 CYP27B1O15528 508 aa13.01□□□□□ -0.33
NEIL1-202ENST00000561643 TAF5LO75529 589 aa13.01□□□□□ -0.33
NEIL1-202ENST00000561643 KRT85P78386 507 aa13.01□□□□□ -0.33
NEIL1-202ENST00000561643 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.01□□□□□ -0.33
NEIL1-202ENST00000561643 KIF1AQ12756 1690 aa13□□□□□ -0.33
NEIL1-202ENST00000561643 CDC37L1Q7L3B6 337 aa13□□□□□ -0.33
NEIL1-202ENST00000561643 CHMP3Q9Y3E7 222 aa13□□□□□ -0.33
NEIL1-202ENST00000561643 RFX5P48382 616 aaPredicted RBP13□□□□□ -0.33
NEIL1-202ENST00000561643 LRP10Q7Z4F1 713 aa13□□□□□ -0.33
NEIL1-202ENST00000561643 CCDC9Q9Y3X0 531 aaKnown RBP13□□□□□ -0.33
NEIL1-202ENST00000561643 PLCB2Q00722 1185 aa13□□□□□ -0.33
NEIL1-202ENST00000561643 C17orf53Q8N3J3 647 aaPredicted RBP13□□□□□ -0.33
NEIL1-202ENST00000561643 ZBTB9Q96C00 473 aa13□□□□□ -0.33
NEIL1-202ENST00000561643 SCN11AQ9UI33 1791 aa12.99□□□□□ -0.33
NEIL1-202ENST00000561643 ADCY5O95622 1261 aa12.99□□□□□ -0.33
NEIL1-202ENST00000561643 TOB2Q14106 344 aaPredicted RBP12.99□□□□□ -0.33
NEIL1-202ENST00000561643 KRT32Q14532 448 aa12.99□□□□□ -0.33
NEIL1-202ENST00000561643 FAM173BQ6P4H8 233 aa12.99□□□□□ -0.33
NEIL1-202ENST00000561643 DBNDD2Q9BQY9 259 aa12.99□□□□□ -0.33
NEIL1-202ENST00000561643 RABL6Q3YEC7 729 aaPredicted RBP12.99□□□□□ -0.33
NEIL1-202ENST00000561643 MRC1P22897 1456 aa12.99□□□□□ -0.33
NEIL1-202ENST00000561643 ADAMTSL3P82987 1691 aa12.99□□□□□ -0.33
NEIL1-202ENST00000561643 ZNF335Q9H4Z2 1342 aaPredicted RBP12.98□□□□□ -0.33
NEIL1-202ENST00000561643 CCDC129Q6ZRS4 1044 aa12.98□□□□□ -0.33
NEIL1-202ENST00000561643 LMBR1LQ6UX01 489 aa12.98□□□□□ -0.33
NEIL1-202ENST00000561643 TTC6Q86TZ1 520 aa12.98□□□□□ -0.33
NEIL1-202ENST00000561643 SECISBP2LQ93073 1101 aaKnown RBP12.98□□□□□ -0.33
NEIL1-202ENST00000561643 MST1RQ04912 1400 aa12.98□□□□□ -0.33
NEIL1-202ENST00000561643 TSGA10IPQ3SY00 556 aa12.98□□□□□ -0.33
NEIL1-202ENST00000561643 DDX46Q7L014 1031 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms