RNA–Protein interactions for RNA: ENST00000561332.1

CCDC33-210, Transcript of coiled-coil domain containing 33, humanhuman

TSL 3

Gene CCDC33, Length 820 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-210ENST00000561332 ZC3H4Q9UPT8 1303 aaKnown RBP17.29■□□□□ 0.36
CCDC33-210ENST00000561332 SF3B3Q15393 1217 aaKnown RBP17.29■□□□□ 0.36
CCDC33-210ENST00000561332 SLC51AQ86UW1 340 aa17.29■□□□□ 0.36
CCDC33-210ENST00000561332 LINS1Q8NG48 757 aa17.29■□□□□ 0.36
CCDC33-210ENST00000561332 ZNF277Q9NRM2 450 aaPredicted RBP17.29■□□□□ 0.36
CCDC33-210ENST00000561332 CDHR2Q9BYE9 1310 aa17.28■□□□□ 0.36
CCDC33-210ENST00000561332 PDE8AO60658 829 aa17.28■□□□□ 0.36
CCDC33-210ENST00000561332 BBOX1O75936 387 aa17.28■□□□□ 0.36
CCDC33-210ENST00000561332 UBE3BQ7Z3V4 1068 aa17.28■□□□□ 0.36
CCDC33-210ENST00000561332 SSH1Q8WYL5 1049 aa17.28■□□□□ 0.36
CCDC33-210ENST00000561332 BCL2L13Q9BXK5 485 aa17.28■□□□□ 0.36
CCDC33-210ENST00000561332 ATP6V0A2Q9Y487 856 aa17.28■□□□□ 0.36
CCDC33-210ENST00000561332 DICER1Q9UPY3 1922 aaKnown RBP17.27■□□□□ 0.36
CCDC33-210ENST00000561332 KDM2BQ8NHM5 1336 aa17.27■□□□□ 0.36
CCDC33-210ENST00000561332 TAF1P21675 1872 aa17.27■□□□□ 0.36
CCDC33-210ENST00000561332 GCKRQ14397 625 aa17.27■□□□□ 0.36
CCDC33-210ENST00000561332 CCDC152Q4G0S7 254 aa17.27■□□□□ 0.36
CCDC33-210ENST00000561332 GRIPAP1Q4V328 841 aa17.27■□□□□ 0.36
CCDC33-210ENST00000561332 MRPL50Q8N5N7 158 aaKnown RBP17.27■□□□□ 0.36
CCDC33-210ENST00000561332 CCDC85AQ96PX6 553 aaPredicted RBP17.27■□□□□ 0.36
CCDC33-210ENST00000561332 PSMD1Q99460 953 aa17.27■□□□□ 0.36
CCDC33-210ENST00000561332 SNED1Q8TER0 1413 aa17.27■□□□□ 0.35
CCDC33-210ENST00000561332 BCAR3O75815 825 aa17.26■□□□□ 0.35
CCDC33-210ENST00000561332 SLC4A10Q6U841 1118 aa17.26■□□□□ 0.35
CCDC33-210ENST00000561332 CELF1Q92879 486 aaKnown RBP17.26■□□□□ 0.35
CCDC33-210ENST00000561332 SMC4Q9NTJ3 1288 aa17.26■□□□□ 0.35
CCDC33-210ENST00000561332 H7C1W4 665 aa17.25■□□□□ 0.35
CCDC33-210ENST00000561332 IARSP41252 1262 aaKnown RBP17.25■□□□□ 0.35
CCDC33-210ENST00000561332 BRPF1P55201 1214 aaPredicted RBP17.25■□□□□ 0.35
CCDC33-210ENST00000561332 CTSWP56202 376 aa17.25■□□□□ 0.35
CCDC33-210ENST00000561332 BEND3Q5T5X7 828 aa17.25■□□□□ 0.35
CCDC33-210ENST00000561332 TMC4Q7Z404 712 aa17.25■□□□□ 0.35
CCDC33-210ENST00000561332 SP8Q8IXZ3 490 aa17.25■□□□□ 0.35
CCDC33-210ENST00000561332 SUPT16HQ9Y5B9 1047 aaKnown RBP17.25■□□□□ 0.35
CCDC33-210ENST00000561332 NMRK2Q9NPI5 230 aa17.24■□□□□ 0.35
CCDC33-210ENST00000561332 SEC31BQ9NQW1 1179 aa17.24■□□□□ 0.35
CCDC33-210ENST00000561332 PTPRCP08575 1304 aa17.23■□□□□ 0.35
CCDC33-210ENST00000561332 MYH3P11055 1940 aa17.23■□□□□ 0.35
CCDC33-210ENST00000561332 GLTPD2A6NH11 291 aa17.23■□□□□ 0.35
CCDC33-210ENST00000561332 RPS8P62241 208 aaKnown RBP17.23■□□□□ 0.35
CCDC33-210ENST00000561332 DPY19L2Q6NUT2 758 aa17.23■□□□□ 0.35
CCDC33-210ENST00000561332 DPP8Q6V1X1 898 aaPredicted RBP17.23■□□□□ 0.35
CCDC33-210ENST00000561332 MPNDQ8N594 471 aa17.23■□□□□ 0.35
CCDC33-210ENST00000561332 SRCIN1Q9C0H9 1055 aa17.23■□□□□ 0.35
CCDC33-210ENST00000561332 COL4A1P02462 1669 aa17.23■□□□□ 0.35
CCDC33-210ENST00000561332 LARGE2Q8N3Y3 721 aa17.22■□□□□ 0.35
CCDC33-210ENST00000561332 SUPT20HQ8NEM7 779 aa17.22■□□□□ 0.35
CCDC33-210ENST00000561332 JDP2Q8WYK2 163 aa17.22■□□□□ 0.35
CCDC33-210ENST00000561332 LRRC37AA6NMS7 1700 aa17.21■□□□□ 0.35
CCDC33-210ENST00000561332 KIF3CO14782 793 aa17.21■□□□□ 0.35
CCDC33-210ENST00000561332 ALDH1L1O75891 902 aa17.21■□□□□ 0.35
CCDC33-210ENST00000561332 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.21■□□□□ 0.35
CCDC33-210ENST00000561332 TTLL11Q8NHH1 800 aa17.21■□□□□ 0.35
CCDC33-210ENST00000561332 C9orf78Q9NZ63 289 aaPredicted RBP17.21■□□□□ 0.35
CCDC33-210ENST00000561332 GRM8O00222 908 aa17.2■□□□□ 0.34
CCDC33-210ENST00000561332 IPO8O15397 1037 aaKnown RBP17.2■□□□□ 0.34
CCDC33-210ENST00000561332 PPIP5K2O43314 1243 aa17.2■□□□□ 0.34
CCDC33-210ENST00000561332 CASP7P55210 303 aa17.2■□□□□ 0.34
CCDC33-210ENST00000561332 ANKRD18AQ8IVF6 992 aa17.2■□□□□ 0.34
CCDC33-210ENST00000561332 CDC5LQ99459 802 aaKnown RBP17.2■□□□□ 0.34
CCDC33-210ENST00000561332 PLA2G12BQ9BX93 195 aa17.2■□□□□ 0.34
CCDC33-210ENST00000561332 GREM2Q9H772 168 aa17.2■□□□□ 0.34
CCDC33-210ENST00000561332 RRAGCQ9HB90 399 aa17.2■□□□□ 0.34
CCDC33-210ENST00000561332 NOB1Q9ULX3 412 aaKnown RBP17.2■□□□□ 0.34
CCDC33-210ENST00000561332 C1QTNF8P60827 252 aa17.19■□□□□ 0.34
CCDC33-210ENST00000561332 AOC3Q16853 763 aa17.19■□□□□ 0.34
CCDC33-210ENST00000561332 C16orf71Q8IYS4 520 aaPredicted RBP17.19■□□□□ 0.34
CCDC33-210ENST00000561332 FRAT1Q92837 279 aaPredicted RBP17.19■□□□□ 0.34
CCDC33-210ENST00000561332 RTFDC1Q9BY42 306 aaPredicted RBP17.19■□□□□ 0.34
CCDC33-210ENST00000561332 NSFL1CQ9UNZ2 370 aaKnown RBP17.19■□□□□ 0.34
CCDC33-210ENST00000561332 RTL9Q8NET4 1388 aa17.18■□□□□ 0.34
CCDC33-210ENST00000561332 COL4A5P29400 1685 aa17.18■□□□□ 0.34
CCDC33-210ENST00000561332 DDNO94850 711 aaPredicted RBP17.18■□□□□ 0.34
CCDC33-210ENST00000561332 RRP1P56182 461 aaKnown RBP17.18■□□□□ 0.34
CCDC33-210ENST00000561332 NIM1KQ8IY84 436 aa17.18■□□□□ 0.34
CCDC33-210ENST00000561332 ARHGAP45Q92619 1136 aa17.18■□□□□ 0.34
CCDC33-210ENST00000561332 KIF16BQ96L93 1317 aa17.18■□□□□ 0.34
CCDC33-210ENST00000561332 ZNF541Q9H0D2 1346 aa17.18■□□□□ 0.34
CCDC33-210ENST00000561332 PLIN1O60240 522 aa17.17■□□□□ 0.34
CCDC33-210ENST00000561332 GPSM2P81274 684 aa17.17■□□□□ 0.34
CCDC33-210ENST00000561332 FAM161AQ3B820 660 aa17.17■□□□□ 0.34
CCDC33-210ENST00000561332 ZKSCAN2Q63HK3 967 aa17.17■□□□□ 0.34
CCDC33-210ENST00000561332 VPS33BQ9H267 617 aa17.17■□□□□ 0.34
CCDC33-210ENST00000561332 DUOX1Q9NRD9 1551 aa17.17■□□□□ 0.34
CCDC33-210ENST00000561332 ANKIB1Q9P2G1 1089 aa17.17■□□□□ 0.34
CCDC33-210ENST00000561332 CHMP3Q9Y3E7 222 aa17.17■□□□□ 0.34
CCDC33-210ENST00000561332 C6orf229H3BNL8 230 aa17.16■□□□□ 0.34
CCDC33-210ENST00000561332 FZD9O00144 591 aa17.16■□□□□ 0.34
CCDC33-210ENST00000561332 VEGFAP15692 232 aaPredicted RBP17.16■□□□□ 0.34
CCDC33-210ENST00000561332 ITGA6P23229 1130 aa17.16■□□□□ 0.34
CCDC33-210ENST00000561332 EIF6P56537 245 aaKnown RBP17.16■□□□□ 0.34
CCDC33-210ENST00000561332 SPEF2Q9C093 1822 aa17.16■□□□□ 0.34
CCDC33-210ENST00000561332 WDR90Q96KV7 1748 aa17.16■□□□□ 0.34
CCDC33-210ENST00000561332 CSF1RP07333 972 aa17.15■□□□□ 0.34
CCDC33-210ENST00000561332 IGHMBP2P38935 993 aaKnown RBP17.15■□□□□ 0.34
CCDC33-210ENST00000561332 KIAA2012Q0VF49 1180 aa17.15■□□□□ 0.34
CCDC33-210ENST00000561332 CNKSR2Q8WXI2 1034 aa17.15■□□□□ 0.34
CCDC33-210ENST00000561332 API5Q9BZZ5 524 aaKnown RBP17.15■□□□□ 0.34
CCDC33-210ENST00000561332 ANKRD18BA2A2Z9 1011 aa17.14■□□□□ 0.33
CCDC33-210ENST00000561332 TOMM70O94826 608 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms