RNA–Protein interactions for RNA: ENST00000561278.1

SHF-211, Transcript of Src homology 2 domain containing F, humanhuman

TSL 4

Gene SHF, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-211ENST00000561278 DDX60Q8IY21 1712 aaKnown RBP16.14■□□□□ 0.17
SHF-211ENST00000561278 EPHX2P34913 555 aa16.14■□□□□ 0.17
SHF-211ENST00000561278 SUPT20HQ8NEM7 779 aa16.14■□□□□ 0.17
SHF-211ENST00000561278 BBOX1O75936 387 aa16.13■□□□□ 0.17
SHF-211ENST00000561278 LMOD1P29536 600 aaPredicted RBP16.13■□□□□ 0.17
SHF-211ENST00000561278 CCDC30Q5VVM6 783 aa16.13■□□□□ 0.17
SHF-211ENST00000561278 MPNDQ8N594 471 aa16.13■□□□□ 0.17
SHF-211ENST00000561278 MYD88Q99836 296 aa16.13■□□□□ 0.17
SHF-211ENST00000561278 CHMP4AQ9BY43 222 aa16.13■□□□□ 0.17
SHF-211ENST00000561278 IRS4O14654 1257 aaPredicted RBP16.12■□□□□ 0.17
SHF-211ENST00000561278 DDX58O95786 925 aaKnown RBP16.12■□□□□ 0.17
SHF-211ENST00000561278 SP8Q8IXZ3 490 aa16.12■□□□□ 0.17
SHF-211ENST00000561278 TSPYL6Q8N831 410 aa16.12■□□□□ 0.17
SHF-211ENST00000561278 PNMA8AQ86V59 439 aaPredicted RBP16.11■□□□□ 0.17
SHF-211ENST00000561278 WWC1Q8IX03 1113 aa16.11■□□□□ 0.17
SHF-211ENST00000561278 STK31Q9BXU1 1019 aa16.11■□□□□ 0.17
SHF-211ENST00000561278 SALL2Q9Y467 1007 aaPredicted RBP16.11■□□□□ 0.17
SHF-211ENST00000561278 CCDC27Q2M243 656 aa16.1■□□□□ 0.17
SHF-211ENST00000561278 TMC4Q7Z404 712 aa16.1■□□□□ 0.17
SHF-211ENST00000561278 TRIM28Q13263 835 aaKnown RBP16.09■□□□□ 0.17
SHF-211ENST00000561278 JMYQ8N9B5 988 aa16.09■□□□□ 0.17
SHF-211ENST00000561278 ZBTB38Q8NAP3 1195 aaPredicted RBP16.09■□□□□ 0.17
SHF-211ENST00000561278 CELF1Q92879 486 aaKnown RBP16.09■□□□□ 0.17
SHF-211ENST00000561278 RTFDC1Q9BY42 306 aaPredicted RBP16.09■□□□□ 0.17
SHF-211ENST00000561278 VPS33BQ9H267 617 aa16.09■□□□□ 0.17
SHF-211ENST00000561278 CREBZFQ9NS37 354 aa16.09■□□□□ 0.17
SHF-211ENST00000561278 LRRC37AA6NMS7 1700 aa16.08■□□□□ 0.17
SHF-211ENST00000561278 ADAMTSL1Q8N6G6 1762 aa16.08■□□□□ 0.17
SHF-211ENST00000561278 TAF1P21675 1872 aa16.08■□□□□ 0.17
SHF-211ENST00000561278 HSP90B1P14625 803 aaKnown RBP16.08■□□□□ 0.16
SHF-211ENST00000561278 SCNN1DP51172 638 aa16.08■□□□□ 0.16
SHF-211ENST00000561278 SF3B3Q15393 1217 aaKnown RBP16.08■□□□□ 0.16
SHF-211ENST00000561278 TWISTNBQ3B726 338 aaPredicted RBP16.08■□□□□ 0.16
SHF-211ENST00000561278 MAP1SQ66K74 1059 aaPredicted RBP16.08■□□□□ 0.16
SHF-211ENST00000561278 CWC25Q9NXE8 425 aaPredicted RBP16.08■□□□□ 0.16
SHF-211ENST00000561278 MKRN1Q9UHC7 482 aaKnown RBP16.08■□□□□ 0.16
SHF-211ENST00000561278 ZNRF3Q9ULT6 936 aa16.08■□□□□ 0.16
SHF-211ENST00000561278 MAP3K2Q9Y2U5 619 aa16.08■□□□□ 0.16
SHF-211ENST00000561278 LTBP1Q14766 1721 aa16.08■□□□□ 0.16
SHF-211ENST00000561278 EPS15P42566 896 aa16.07■□□□□ 0.16
SHF-211ENST00000561278 KIAA2012Q0VF49 1180 aa16.07■□□□□ 0.16
SHF-211ENST00000561278 CCDC191Q8NCU4 936 aa16.07■□□□□ 0.16
SHF-211ENST00000561278 JARID2Q92833 1246 aaPredicted RBP16.07■□□□□ 0.16
SHF-211ENST00000561278 METTL22Q9BUU2 404 aaPredicted RBP16.07■□□□□ 0.16
SHF-211ENST00000561278 NSFL1CQ9UNZ2 370 aaKnown RBP16.07■□□□□ 0.16
SHF-211ENST00000561278 DUOX1Q9NRD9 1551 aa16.07■□□□□ 0.16
SHF-211ENST00000561278 COL4A1P02462 1669 aa16.06■□□□□ 0.16
SHF-211ENST00000561278 IL16Q14005 1332 aa16.06■□□□□ 0.16
SHF-211ENST00000561278 PASKQ96RG2 1323 aa16.06■□□□□ 0.16
SHF-211ENST00000561278 C6orf229H3BNL8 230 aa16.06■□□□□ 0.16
SHF-211ENST00000561278 RAD17O75943 681 aa16.06■□□□□ 0.16
SHF-211ENST00000561278 NEXNQ0ZGT2 675 aa16.06■□□□□ 0.16
SHF-211ENST00000561278 CCDC85AQ96PX6 553 aaPredicted RBP16.06■□□□□ 0.16
SHF-211ENST00000561278 FANCIQ9NVI1 1328 aa16.05■□□□□ 0.16
SHF-211ENST00000561278 PI4KAP2A4QPH2 592 aa16.05■□□□□ 0.16
SHF-211ENST00000561278 PCCAP05165 728 aaPredicted RBP16.05■□□□□ 0.16
SHF-211ENST00000561278 C1QBPQ07021 282 aaKnown RBP16.05■□□□□ 0.16
SHF-211ENST00000561278 CXCL9Q07325 125 aa16.05■□□□□ 0.16
SHF-211ENST00000561278 WASHC4Q2M389 1173 aa16.05■□□□□ 0.16
SHF-211ENST00000561278 CCDC152Q4G0S7 254 aa16.05■□□□□ 0.16
SHF-211ENST00000561278 CIAPIN1Q6FI81 312 aa16.05■□□□□ 0.16
SHF-211ENST00000561278 FAM9BQ8IZU0 186 aa16.05■□□□□ 0.16
SHF-211ENST00000561278 CNTROBQ8N137 903 aa16.05■□□□□ 0.16
SHF-211ENST00000561278 PI4KAP1Q8N8J0 262 aa16.05■□□□□ 0.16
SHF-211ENST00000561278 BCL2L13Q9BXK5 485 aa16.05■□□□□ 0.16
SHF-211ENST00000561278 TMEM88BA6NKF7 163 aa16.04■□□□□ 0.16
SHF-211ENST00000561278 RIMBP2O15034 1052 aa16.04■□□□□ 0.16
SHF-211ENST00000561278 GMPSP49915 693 aaPredicted RBP16.04■□□□□ 0.16
SHF-211ENST00000561278 GPSM2P81274 684 aa16.04■□□□□ 0.16
SHF-211ENST00000561278 KSR2Q6VAB6 950 aa16.04■□□□□ 0.16
SHF-211ENST00000561278 SEC31BQ9NQW1 1179 aa16.04■□□□□ 0.16
SHF-211ENST00000561278 PDE8AO60658 829 aa16.03■□□□□ 0.16
SHF-211ENST00000561278 ITGBL1O95965 494 aaPredicted RBP16.03■□□□□ 0.16
SHF-211ENST00000561278 SLC4A2P04920 1241 aa16.03■□□□□ 0.16
SHF-211ENST00000561278 RPS8P62241 208 aaKnown RBP16.03■□□□□ 0.16
SHF-211ENST00000561278 TNIP1Q15025 636 aa16.03■□□□□ 0.16
SHF-211ENST00000561278 IFFO2Q5TF58 517 aa16.03■□□□□ 0.16
SHF-211ENST00000561278 USP50Q70EL3 339 aaPredicted RBP16.03■□□□□ 0.16
SHF-211ENST00000561278 EYA3Q99504 573 aa16.03■□□□□ 0.16
SHF-211ENST00000561278 DBNDD1Q9H9R9 158 aa16.03■□□□□ 0.16
SHF-211ENST00000561278 ADARB2Q9NS39 739 aaKnown RBP16.03■□□□□ 0.16
SHF-211ENST00000561278 GPRC5DQ9NZD1 345 aa16.03■□□□□ 0.16
SHF-211ENST00000561278 HSPA1AP0DMV8 641 aaKnown RBP16.02■□□□□ 0.16
SHF-211ENST00000561278 HSPA1BP0DMV9 641 aaKnown RBP16.02■□□□□ 0.16
SHF-211ENST00000561278 CWF19L2Q2TBE0 894 aaKnown RBP16.02■□□□□ 0.16
SHF-211ENST00000561278 GPR101Q96P66 508 aaPredicted RBP16.02■□□□□ 0.16
SHF-211ENST00000561278 ANKIB1Q9P2G1 1089 aa16.02■□□□□ 0.16
SHF-211ENST00000561278 CNTNAP1P78357 1384 aa16.01■□□□□ 0.15
SHF-211ENST00000561278 YDJCA8MPS7 323 aa16.01■□□□□ 0.15
SHF-211ENST00000561278 G3V3G9 751 aa16.01■□□□□ 0.15
SHF-211ENST00000561278 UFL1O94874 794 aa16.01■□□□□ 0.15
SHF-211ENST00000561278 IGKV5-2P06315 115 aa16.01■□□□□ 0.15
SHF-211ENST00000561278 FKBP5Q13451 457 aaPredicted RBP16.01■□□□□ 0.15
SHF-211ENST00000561278 NCBP3Q53F19 620 aaKnown RBP16.01■□□□□ 0.15
SHF-211ENST00000561278 DCAF8Q5TAQ9 597 aa16.01■□□□□ 0.15
SHF-211ENST00000561278 G2E3Q7L622 706 aa16.01■□□□□ 0.15
SHF-211ENST00000561278 WDR63Q8IWG1 891 aa16.01■□□□□ 0.15
SHF-211ENST00000561278 POLLQ9UGP5 575 aa16.01■□□□□ 0.15
SHF-211ENST00000561278 ABT1Q9ULW3 272 aaKnown RBP16.01■□□□□ 0.15
SHF-211ENST00000561278 CDHR2Q9BYE9 1310 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms