RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 SLC4A10Q6U841 1118 aa17.7■□□□□ 0.42
TPM1-230ENST00000561266 COL4A5P29400 1685 aa17.7■□□□□ 0.42
TPM1-230ENST00000561266 SPEF2Q9C093 1822 aa17.7■□□□□ 0.42
TPM1-230ENST00000561266 BCAR3O75815 825 aa17.69■□□□□ 0.42
TPM1-230ENST00000561266 CT47B1P0C2W7 299 aaPredicted RBP17.69■□□□□ 0.42
TPM1-230ENST00000561266 GRAPQ13588 217 aa17.69■□□□□ 0.42
TPM1-230ENST00000561266 CCDC93Q567U6 631 aa17.69■□□□□ 0.42
TPM1-230ENST00000561266 DDX46Q7L014 1031 aaKnown RBP17.69■□□□□ 0.42
TPM1-230ENST00000561266 GRAPLQ8TC17 118 aaPredicted RBP17.69■□□□□ 0.42
TPM1-230ENST00000561266 ZNF526Q8TF50 670 aaPredicted RBP17.69■□□□□ 0.42
TPM1-230ENST00000561266 NOB1Q9ULX3 412 aaKnown RBP17.69■□□□□ 0.42
TPM1-230ENST00000561266 TNNQ9UQP3 1299 aa17.69■□□□□ 0.42
TPM1-230ENST00000561266 LRRC37AA6NMS7 1700 aa17.69■□□□□ 0.42
TPM1-230ENST00000561266 LTBP3Q9NS15 1303 aa17.69■□□□□ 0.42
TPM1-230ENST00000561266 LMNB1P20700 586 aa17.68■□□□□ 0.42
TPM1-230ENST00000561266 TTLL11Q8NHH1 800 aa17.68■□□□□ 0.42
TPM1-230ENST00000561266 TAOK3Q9H2K8 898 aa17.68■□□□□ 0.42
TPM1-230ENST00000561266 ZNF277Q9NRM2 450 aaPredicted RBP17.68■□□□□ 0.42
TPM1-230ENST00000561266 ATP6V0A2Q9Y487 856 aa17.68■□□□□ 0.42
TPM1-230ENST00000561266 PTPRCP08575 1304 aa17.68■□□□□ 0.42
TPM1-230ENST00000561266 BRPF1P55201 1214 aaPredicted RBP17.67■□□□□ 0.42
TPM1-230ENST00000561266 FKBP4Q02790 459 aaKnown RBP eCLIP17.67■□□□□ 0.42
TPM1-230ENST00000561266 EPHA10Q5JZY3 1008 aa17.67■□□□□ 0.42
TPM1-230ENST00000561266 DUOX1Q9NRD9 1551 aa17.66■□□□□ 0.42
TPM1-230ENST00000561266 BBOX1O75936 387 aa17.66■□□□□ 0.42
TPM1-230ENST00000561266 CTSWP56202 376 aa17.66■□□□□ 0.42
TPM1-230ENST00000561266 FOXO4P98177 505 aa17.66■□□□□ 0.42
TPM1-230ENST00000561266 SOGA3Q5TF21 947 aa17.66■□□□□ 0.42
TPM1-230ENST00000561266 KAZALD1Q96I82 304 aa17.66■□□□□ 0.42
TPM1-230ENST00000561266 PLA2G12BQ9BX93 195 aa17.66■□□□□ 0.42
TPM1-230ENST00000561266 GREM2Q9H772 168 aa17.66■□□□□ 0.42
TPM1-230ENST00000561266 LTBP1Q14766 1721 aa17.65■□□□□ 0.42
TPM1-230ENST00000561266 ALDH1L1O75891 902 aa17.65■□□□□ 0.42
TPM1-230ENST00000561266 NBPF7P0C2Y1 421 aaPredicted RBP17.65■□□□□ 0.42
TPM1-230ENST00000561266 SP8Q8IXZ3 490 aa17.65■□□□□ 0.42
TPM1-230ENST00000561266 RTKN2Q8IZC4 609 aa17.65■□□□□ 0.42
TPM1-230ENST00000561266 SRCIN1Q9C0H9 1055 aa17.65■□□□□ 0.42
TPM1-230ENST00000561266 GRM8O00222 908 aa17.64■□□□□ 0.41
TPM1-230ENST00000561266 CSF1RP07333 972 aa17.64■□□□□ 0.41
TPM1-230ENST00000561266 RPS8P62241 208 aaKnown RBP17.64■□□□□ 0.41
TPM1-230ENST00000561266 CCDC152Q4G0S7 254 aa17.63■□□□□ 0.41
TPM1-230ENST00000561266 PSMD1Q99460 953 aa17.63■□□□□ 0.41
TPM1-230ENST00000561266 WTIPA6NIX2 430 aaPredicted RBP17.62■□□□□ 0.41
TPM1-230ENST00000561266 IARSP41252 1262 aaKnown RBP17.62■□□□□ 0.41
TPM1-230ENST00000561266 GPSM2P81274 684 aa17.62■□□□□ 0.41
TPM1-230ENST00000561266 FAM161AQ3B820 660 aa17.62■□□□□ 0.41
TPM1-230ENST00000561266 CC2D2BQ6DHV5 1058 aa17.62■□□□□ 0.41
TPM1-230ENST00000561266 SUCLG2Q96I99 432 aa17.62■□□□□ 0.41
TPM1-230ENST00000561266 USP44Q9H0E7 712 aa17.62■□□□□ 0.41
TPM1-230ENST00000561266 UTYO14607 1347 aa17.62■□□□□ 0.41
TPM1-230ENST00000561266 NMRK2Q9NPI5 230 aa17.61■□□□□ 0.41
TPM1-230ENST00000561266 RTL9Q8NET4 1388 aa17.61■□□□□ 0.41
TPM1-230ENST00000561266 HSP90B1P14625 803 aaKnown RBP17.6■□□□□ 0.41
TPM1-230ENST00000561266 MPNDQ8N594 471 aa17.6■□□□□ 0.41
TPM1-230ENST00000561266 GPR101Q96P66 508 aaPredicted RBP17.6■□□□□ 0.41
TPM1-230ENST00000561266 RTFDC1Q9BY42 306 aaPredicted RBP17.6■□□□□ 0.41
TPM1-230ENST00000561266 C9orf78Q9NZ63 289 aaPredicted RBP17.6■□□□□ 0.41
TPM1-230ENST00000561266 ZNF541Q9H0D2 1346 aa17.59■□□□□ 0.41
TPM1-230ENST00000561266 KIF3CO14782 793 aa17.59■□□□□ 0.41
TPM1-230ENST00000561266 ITGA6P23229 1130 aa17.59■□□□□ 0.41
TPM1-230ENST00000561266 AOC3Q16853 763 aa17.59■□□□□ 0.41
TPM1-230ENST00000561266 LMBR1LQ6UX01 489 aa17.59■□□□□ 0.41
TPM1-230ENST00000561266 POLLQ9UGP5 575 aa17.59■□□□□ 0.41
TPM1-230ENST00000561266 A0A1B0GUL6 1792 aa17.58■□□□□ 0.41
TPM1-230ENST00000561266 POTECB2RU33 542 aa17.58■□□□□ 0.4
TPM1-230ENST00000561266 TRIM27P14373 513 aa17.58■□□□□ 0.4
TPM1-230ENST00000561266 DPP8Q6V1X1 898 aaPredicted RBP17.58■□□□□ 0.4
TPM1-230ENST00000561266 ANKRD18AQ8IVF6 992 aa17.58■□□□□ 0.4
TPM1-230ENST00000561266 GPBP1L1Q9HC44 474 aaPredicted RBP17.58■□□□□ 0.4
TPM1-230ENST00000561266 GLTPD2A6NH11 291 aa17.57■□□□□ 0.4
TPM1-230ENST00000561266 DDNO94850 711 aaPredicted RBP17.57■□□□□ 0.4
TPM1-230ENST00000561266 TMC4Q7Z404 712 aa17.57■□□□□ 0.4
TPM1-230ENST00000561266 ANKRD44Q8N8A2 993 aa17.57■□□□□ 0.4
TPM1-230ENST00000561266 ARHGAP45Q92619 1136 aa17.57■□□□□ 0.4
TPM1-230ENST00000561266 FRAT1Q92837 279 aaPredicted RBP17.57■□□□□ 0.4
TPM1-230ENST00000561266 ZNF594Q96JF6 807 aaPredicted RBP17.57■□□□□ 0.4
TPM1-230ENST00000561266 API5Q9BZZ5 524 aaKnown RBP17.57■□□□□ 0.4
TPM1-230ENST00000561266 NSFL1CQ9UNZ2 370 aaKnown RBP17.57■□□□□ 0.4
TPM1-230ENST00000561266 KIF16BQ96L93 1317 aa17.56■□□□□ 0.4
TPM1-230ENST00000561266 ZC3H4Q9UPT8 1303 aaKnown RBP17.56■□□□□ 0.4
TPM1-230ENST00000561266 FZD9O00144 591 aa17.56■□□□□ 0.4
TPM1-230ENST00000561266 GRIPAP1Q4V328 841 aa17.56■□□□□ 0.4
TPM1-230ENST00000561266 CLUAP1Q96AJ1 413 aa17.56■□□□□ 0.4
TPM1-230ENST00000561266 BICC1Q9H694 974 aaKnown RBP17.56■□□□□ 0.4
TPM1-230ENST00000561266 RRAGCQ9HB90 399 aa17.56■□□□□ 0.4
TPM1-230ENST00000561266 MINPP1Q9UNW1 487 aa17.56■□□□□ 0.4
TPM1-230ENST00000561266 WDR90Q96KV7 1748 aa17.55■□□□□ 0.4
TPM1-230ENST00000561266 PPIP5K2O43314 1243 aa17.55■□□□□ 0.4
TPM1-230ENST00000561266 ATF7IPQ6VMQ6 1270 aa17.55■□□□□ 0.4
TPM1-230ENST00000561266 LARGE2Q8N3Y3 721 aa17.55■□□□□ 0.4
TPM1-230ENST00000561266 TBC1D16Q8TBP0 767 aa17.55■□□□□ 0.4
TPM1-230ENST00000561266 CDC5LQ99459 802 aaKnown RBP17.55■□□□□ 0.4
TPM1-230ENST00000561266 BSDC1Q9NW68 430 aaPredicted RBP17.55■□□□□ 0.4
TPM1-230ENST00000561266 CHMP3Q9Y3E7 222 aa17.55■□□□□ 0.4
TPM1-230ENST00000561266 SCN9AQ15858 1988 aa17.55■□□□□ 0.4
TPM1-230ENST00000561266 RLBP1P12271 317 aa17.54■□□□□ 0.4
TPM1-230ENST00000561266 CCT4P50991 539 aaKnown RBP17.54■□□□□ 0.4
TPM1-230ENST00000561266 KIAA2012Q0VF49 1180 aa17.54■□□□□ 0.4
TPM1-230ENST00000561266 RABL6Q3YEC7 729 aaPredicted RBP17.54■□□□□ 0.4
TPM1-230ENST00000561266 INTS3Q68E01 1043 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms