RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 HYPKQ9NX55 129 aa35.11■■■■□ 3.21
SNRPA1-215ENST00000561187 BBOX1O75936 387 aa35.1■■■■□ 3.21
SNRPA1-215ENST00000561187 SP8Q8IXZ3 490 aa35.1■■■■□ 3.21
SNRPA1-215ENST00000561187 ZNF853P0CG23 659 aa35.09■■■■□ 3.21
SNRPA1-215ENST00000561187 SUPT20HQ8NEM7 779 aa35.09■■■■□ 3.21
SNRPA1-215ENST00000561187 COL4A1P02462 1669 aa35.08■■■■□ 3.21
SNRPA1-215ENST00000561187 PHAXQ9H814 394 aaKnown RBP35.08■■■■□ 3.21
SNRPA1-215ENST00000561187 IFT57Q9NWB7 429 aa35.08■■■■□ 3.21
SNRPA1-215ENST00000561187 FMR1Q06787 632 aaKnown RBP eCLIP35.07■■■■□ 3.2
SNRPA1-215ENST00000561187 RTFDC1Q9BY42 306 aaPredicted RBP35.07■■■■□ 3.2
SNRPA1-215ENST00000561187 DUOX1Q9NRD9 1551 aa35.06■■■■□ 3.2
SNRPA1-215ENST00000561187 GNAI1P63096 354 aa35.06■■■■□ 3.2
SNRPA1-215ENST00000561187 RIC3Q7Z5B4 369 aa35.06■■■■□ 3.2
SNRPA1-215ENST00000561187 ZNRF3Q9ULT6 936 aa35.06■■■■□ 3.2
SNRPA1-215ENST00000561187 CAPN15O75808 1086 aa35.05■■■■□ 3.2
SNRPA1-215ENST00000561187 CXCL9Q07325 125 aa35.05■■■■□ 3.2
SNRPA1-215ENST00000561187 GOLGA2Q08379 1002 aa35.05■■■■□ 3.2
SNRPA1-215ENST00000561187 TNS4Q8IZW8 715 aa35.05■■■■□ 3.2
SNRPA1-215ENST00000561187 CELF1Q92879 486 aaKnown RBP35.05■■■■□ 3.2
SNRPA1-215ENST00000561187 RAD17O75943 681 aa35.04■■■■□ 3.2
SNRPA1-215ENST00000561187 VEGFBP49765 207 aa35.04■■■■□ 3.2
SNRPA1-215ENST00000561187 CCDC184Q52MB2 194 aa35.04■■■■□ 3.2
SNRPA1-215ENST00000561187 KIAA2012Q0VF49 1180 aa35.03■■■■□ 3.2
SNRPA1-215ENST00000561187 C8orf58Q8NAV2 365 aa35.03■■■■□ 3.2
SNRPA1-215ENST00000561187 LRRC37AA6NMS7 1700 aa35.03■■■■□ 3.2
SNRPA1-215ENST00000561187 GMPSP49915 693 aaPredicted RBP35.02■■■■□ 3.2
SNRPA1-215ENST00000561187 CALD1Q05682 793 aaKnown RBP35.02■■■■□ 3.2
SNRPA1-215ENST00000561187 ABT1Q9ULW3 272 aaKnown RBP35.02■■■■□ 3.2
SNRPA1-215ENST00000561187 IRS4O14654 1257 aaPredicted RBP35.01■■■■□ 3.2
SNRPA1-215ENST00000561187 MYD88Q99836 296 aa35.01■■■■□ 3.2
SNRPA1-215ENST00000561187 VPS33BQ9H267 617 aa35.01■■■■□ 3.2
SNRPA1-215ENST00000561187 GPRC5DQ9NZD1 345 aa35.01■■■■□ 3.2
SNRPA1-215ENST00000561187 CIAPIN1Q6FI81 312 aa35■■■■□ 3.19
SNRPA1-215ENST00000561187 TRAF5O00463 557 aa34.99■■■■□ 3.19
SNRPA1-215ENST00000561187 JARID2Q92833 1246 aaPredicted RBP34.99■■■■□ 3.19
SNRPA1-215ENST00000561187 SF3B3Q15393 1217 aaKnown RBP34.98■■■■□ 3.19
SNRPA1-215ENST00000561187 USP50Q70EL3 339 aaPredicted RBP34.98■■■■□ 3.19
SNRPA1-215ENST00000561187 BCL2L13Q9BXK5 485 aa34.98■■■■□ 3.19
SNRPA1-215ENST00000561187 NSFL1CQ9UNZ2 370 aaKnown RBP34.98■■■■□ 3.19
SNRPA1-215ENST00000561187 YDJCA8MPS7 323 aa34.97■■■■□ 3.19
SNRPA1-215ENST00000561187 TSR2Q969E8 191 aaKnown RBP34.97■■■■□ 3.19
SNRPA1-215ENST00000561187 ADARB2Q9NS39 739 aaKnown RBP34.97■■■■□ 3.19
SNRPA1-215ENST00000561187 RIMBP2O15034 1052 aa34.96■■■■□ 3.19
SNRPA1-215ENST00000561187 FOXN1O15353 648 aa34.96■■■■□ 3.19
SNRPA1-215ENST00000561187 TMC4Q7Z404 712 aa34.96■■■■□ 3.19
SNRPA1-215ENST00000561187 GPR101Q96P66 508 aaPredicted RBP34.96■■■■□ 3.19
SNRPA1-215ENST00000561187 SHTN1A0MZ66 631 aa34.95■■■■□ 3.19
SNRPA1-215ENST00000561187 PAXIP1Q6ZW49 1069 aaPredicted RBP34.95■■■■□ 3.19
SNRPA1-215ENST00000561187 TSPYL6Q8N831 410 aa34.95■■■■□ 3.19
SNRPA1-215ENST00000561187 DBNDD1Q9H9R9 158 aa34.95■■■■□ 3.19
SNRPA1-215ENST00000561187 GPSM2P81274 684 aa34.94■■■■□ 3.18
SNRPA1-215ENST00000561187 DEFB115Q30KQ5 88 aa34.94■■■■□ 3.18
SNRPA1-215ENST00000561187 CCDC85AQ96PX6 553 aaPredicted RBP34.94■■■■□ 3.18
SNRPA1-215ENST00000561187 C6orf229H3BNL8 230 aa34.93■■■■□ 3.18
SNRPA1-215ENST00000561187 GRM1Q13255 1194 aa34.93■■■■□ 3.18
SNRPA1-215ENST00000561187 TRIM28Q13263 835 aaKnown RBP34.93■■■■□ 3.18
SNRPA1-215ENST00000561187 SEC31BQ9NQW1 1179 aa34.93■■■■□ 3.18
SNRPA1-215ENST00000561187 RASSF10A6NK89 507 aa34.92■■■■□ 3.18
SNRPA1-215ENST00000561187 WASHC4Q2M389 1173 aa34.92■■■■□ 3.18
SNRPA1-215ENST00000561187 ZBTB38Q8NAP3 1195 aaPredicted RBP34.92■■■■□ 3.18
SNRPA1-215ENST00000561187 TNIP1Q15025 636 aa34.91■■■■□ 3.18
SNRPA1-215ENST00000561187 TRPM4Q8TD43 1214 aa34.91■■■■□ 3.18
SNRPA1-215ENST00000561187 POLLQ9UGP5 575 aa34.91■■■■□ 3.18
SNRPA1-215ENST00000561187 AIDAQ96BJ3 306 aa34.9■■■■□ 3.18
SNRPA1-215ENST00000561187 ZBTB12Q9Y330 459 aaPredicted RBP34.9■■■■□ 3.18
SNRPA1-215ENST00000561187 TRPM7Q96QT4 1865 aa34.89■■■■□ 3.18
SNRPA1-215ENST00000561187 CCDC30Q5VVM6 783 aa34.89■■■■□ 3.18
SNRPA1-215ENST00000561187 GLIS2Q9BZE0 524 aaPredicted RBP34.89■■■■□ 3.18
SNRPA1-215ENST00000561187 DOK7Q18PE1 504 aa34.88■■■■□ 3.17
SNRPA1-215ENST00000561187 CWC25Q9NXE8 425 aaPredicted RBP34.88■■■■□ 3.17
SNRPA1-215ENST00000561187 WDR33Q9C0J8 1336 aaKnown RBP34.87■■■■□ 3.17
SNRPA1-215ENST00000561187 RPS8P62241 208 aaKnown RBP34.87■■■■□ 3.17
SNRPA1-215ENST00000561187 MAP3K2Q9Y2U5 619 aa34.87■■■■□ 3.17
SNRPA1-215ENST00000561187 PSMD14O00487 310 aa34.86■■■■□ 3.17
SNRPA1-215ENST00000561187 DDX58O95786 925 aaKnown RBP34.86■■■■□ 3.17
SNRPA1-215ENST00000561187 HIRAP54198 1017 aaPredicted RBP34.86■■■■□ 3.17
SNRPA1-215ENST00000561187 MICALL2Q8IY33 904 aa34.86■■■■□ 3.17
SNRPA1-215ENST00000561187 METTL22Q9BUU2 404 aaPredicted RBP34.86■■■■□ 3.17
SNRPA1-215ENST00000561187 CNOT7Q9UIV1 285 aaKnown RBP34.86■■■■□ 3.17
SNRPA1-215ENST00000561187 PCCAP05165 728 aaPredicted RBP34.85■■■■□ 3.17
SNRPA1-215ENST00000561187 CST9Q5W186 159 aa34.85■■■■□ 3.17
SNRPA1-215ENST00000561187 CCDC191Q8NCU4 936 aa34.85■■■■□ 3.17
SNRPA1-215ENST00000561187 ZNF408Q9H9D4 720 aa34.85■■■■□ 3.17
SNRPA1-215ENST00000561187 CDHR2Q9BYE9 1310 aa34.84■■■■□ 3.17
SNRPA1-215ENST00000561187 ECE2O60344 883 aa34.84■■■■□ 3.17
SNRPA1-215ENST00000561187 TBC1D16Q8TBP0 767 aa34.84■■■■□ 3.17
SNRPA1-215ENST00000561187 KCNQ5Q9NR82 932 aa34.84■■■■□ 3.17
SNRPA1-215ENST00000561187 CYP4F22Q6NT55 531 aa34.83■■■■□ 3.17
SNRPA1-215ENST00000561187 UFL1O94874 794 aa34.82■■■■□ 3.16
SNRPA1-215ENST00000561187 CELF2O95319 508 aaKnown RBP34.82■■■■□ 3.16
SNRPA1-215ENST00000561187 CCDC152Q4G0S7 254 aa34.82■■■■□ 3.16
SNRPA1-215ENST00000561187 CAPNS2Q96L46 248 aa34.82■■■■□ 3.16
SNRPA1-215ENST00000561187 EYA3Q99504 573 aa34.82■■■■□ 3.16
SNRPA1-215ENST00000561187 ANKIB1Q9P2G1 1089 aa34.82■■■■□ 3.16
SNRPA1-215ENST00000561187 PI4KAP2A4QPH2 592 aa34.81■■■■□ 3.16
SNRPA1-215ENST00000561187 PDE8AO60658 829 aa34.81■■■■□ 3.16
SNRPA1-215ENST00000561187 WWC1Q8IX03 1113 aa34.81■■■■□ 3.16
SNRPA1-215ENST00000561187 PI4KAP1Q8N8J0 262 aa34.81■■■■□ 3.16
SNRPA1-215ENST00000561187 WBP1LQ9NX94 342 aa34.81■■■■□ 3.16
SNRPA1-215ENST00000561187 SALL2Q9Y467 1007 aaPredicted RBP34.81■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms