RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 PPIP5K2O43314 1243 aa20.58■□□□□ 0.89
LMX1B-204ENST00000561065 BBOX1O75936 387 aa20.58■□□□□ 0.89
LMX1B-204ENST00000561065 TWISTNBQ3B726 338 aaPredicted RBP20.58■□□□□ 0.89
LMX1B-204ENST00000561065 SP8Q8IXZ3 490 aa20.58■□□□□ 0.89
LMX1B-204ENST00000561065 GPC2Q8N158 579 aa20.58■□□□□ 0.89
LMX1B-204ENST00000561065 JDP2Q8WYK2 163 aa20.58■□□□□ 0.89
LMX1B-204ENST00000561065 SALL2Q9Y467 1007 aaPredicted RBP20.58■□□□□ 0.89
LMX1B-204ENST00000561065 CACNA1FO60840 1977 aa20.58■□□□□ 0.89
LMX1B-204ENST00000561065 SPEF2Q9C093 1822 aa20.58■□□□□ 0.88
LMX1B-204ENST00000561065 CHADLQ6NUI6 762 aa20.57■□□□□ 0.88
LMX1B-204ENST00000561065 G2E3Q7L622 706 aa20.57■□□□□ 0.88
LMX1B-204ENST00000561065 METTL22Q9BUU2 404 aaPredicted RBP20.57■□□□□ 0.88
LMX1B-204ENST00000561065 ZBTB38Q8NAP3 1195 aaPredicted RBP20.56■□□□□ 0.88
LMX1B-204ENST00000561065 KLRG1Q96E93 195 aa20.56■□□□□ 0.88
LMX1B-204ENST00000561065 SPINK5Q9NQ38 1064 aaPredicted RBP20.56■□□□□ 0.88
LMX1B-204ENST00000561065 HACL1Q9UJ83 578 aa20.56■□□□□ 0.88
LMX1B-204ENST00000561065 MAP3K2Q9Y2U5 619 aa20.56■□□□□ 0.88
LMX1B-204ENST00000561065 EPHX2P34913 555 aa20.55■□□□□ 0.88
LMX1B-204ENST00000561065 SCNN1DP51172 638 aa20.55■□□□□ 0.88
LMX1B-204ENST00000561065 DPP8Q6V1X1 898 aaPredicted RBP20.55■□□□□ 0.88
LMX1B-204ENST00000561065 LDHDQ86WU2 507 aa20.55■□□□□ 0.88
LMX1B-204ENST00000561065 NIM1KQ8IY84 436 aa20.55■□□□□ 0.88
LMX1B-204ENST00000561065 JARID2Q92833 1246 aaPredicted RBP20.55■□□□□ 0.88
LMX1B-204ENST00000561065 PI4KAP2A4QPH2 592 aa20.54■□□□□ 0.88
LMX1B-204ENST00000561065 IGKV5-2P06315 115 aa20.54■□□□□ 0.88
LMX1B-204ENST00000561065 EIF6P56537 245 aaKnown RBP20.54■□□□□ 0.88
LMX1B-204ENST00000561065 MPNDQ8N594 471 aa20.54■□□□□ 0.88
LMX1B-204ENST00000561065 PI4KAP1Q8N8J0 262 aa20.54■□□□□ 0.88
LMX1B-204ENST00000561065 CCDC191Q8NCU4 936 aa20.54■□□□□ 0.88
LMX1B-204ENST00000561065 GJA3Q9Y6H8 435 aa20.54■□□□□ 0.88
LMX1B-204ENST00000561065 DDX58O95786 925 aaKnown RBP20.53■□□□□ 0.88
LMX1B-204ENST00000561065 PCCAP05165 728 aaPredicted RBP20.53■□□□□ 0.88
LMX1B-204ENST00000561065 KIAA2012Q0VF49 1180 aa20.53■□□□□ 0.88
LMX1B-204ENST00000561065 EAPPQ56P03 285 aaPredicted RBP20.53■□□□□ 0.88
LMX1B-204ENST00000561065 KSR2Q6VAB6 950 aa20.53■□□□□ 0.88
LMX1B-204ENST00000561065 FAM9BQ8IZU0 186 aa20.53■□□□□ 0.88
LMX1B-204ENST00000561065 CWC25Q9NXE8 425 aaPredicted RBP20.53■□□□□ 0.88
LMX1B-204ENST00000561065 PASKQ96RG2 1323 aa20.53■□□□□ 0.88
LMX1B-204ENST00000561065 WDR63Q8IWG1 891 aa20.53■□□□□ 0.88
LMX1B-204ENST00000561065 SUPT20HQ8NEM7 779 aa20.53■□□□□ 0.88
LMX1B-204ENST00000561065 STK31Q9BXU1 1019 aa20.53■□□□□ 0.88
LMX1B-204ENST00000561065 TMX4Q9H1E5 349 aaPredicted RBP20.53■□□□□ 0.88
LMX1B-204ENST00000561065 SEC31BQ9NQW1 1179 aa20.53■□□□□ 0.88
LMX1B-204ENST00000561065 SCN9AQ15858 1988 aa20.52■□□□□ 0.88
LMX1B-204ENST00000561065 TMC4Q7Z404 712 aa20.52■□□□□ 0.87
LMX1B-204ENST00000561065 VPS33BQ9H267 617 aa20.52■□□□□ 0.87
LMX1B-204ENST00000561065 CXCL9Q07325 125 aa20.51■□□□□ 0.87
LMX1B-204ENST00000561065 CWF19L2Q2TBE0 894 aaKnown RBP20.51■□□□□ 0.87
LMX1B-204ENST00000561065 JMYQ8N9B5 988 aa20.51■□□□□ 0.87
LMX1B-204ENST00000561065 ZNRF3Q9ULT6 936 aa20.51■□□□□ 0.87
LMX1B-204ENST00000561065 CDHR2Q9BYE9 1310 aa20.5■□□□□ 0.87
LMX1B-204ENST00000561065 YDJCA8MPS7 323 aa20.5■□□□□ 0.87
LMX1B-204ENST00000561065 VAMP4O75379 141 aa20.5■□□□□ 0.87
LMX1B-204ENST00000561065 ITGBL1O95965 494 aaPredicted RBP20.5■□□□□ 0.87
LMX1B-204ENST00000561065 SLC4A2P04920 1241 aa20.5■□□□□ 0.87
LMX1B-204ENST00000561065 EPS15P42566 896 aa20.5■□□□□ 0.87
LMX1B-204ENST00000561065 GPSM2P81274 684 aa20.5■□□□□ 0.87
LMX1B-204ENST00000561065 EXOSC9Q06265 439 aaKnown RBP20.5■□□□□ 0.87
LMX1B-204ENST00000561065 CCDC85AQ96PX6 553 aaPredicted RBP20.5■□□□□ 0.87
LMX1B-204ENST00000561065 NEURL1BA8MQ27 555 aa20.49■□□□□ 0.87
LMX1B-204ENST00000561065 PDE8AO60658 829 aa20.49■□□□□ 0.87
LMX1B-204ENST00000561065 FLIIQ13045 1269 aa20.49■□□□□ 0.87
LMX1B-204ENST00000561065 GPR101Q96P66 508 aaPredicted RBP20.49■□□□□ 0.87
LMX1B-204ENST00000561065 POLLQ9UGP5 575 aa20.49■□□□□ 0.87
LMX1B-204ENST00000561065 PSME4Q14997 1843 aa20.48■□□□□ 0.87
LMX1B-204ENST00000561065 RPS8P62241 208 aaKnown RBP20.48■□□□□ 0.87
LMX1B-204ENST00000561065 MAP1SQ66K74 1059 aaPredicted RBP20.48■□□□□ 0.87
LMX1B-204ENST00000561065 PNMA8AQ86V59 439 aaPredicted RBP20.48■□□□□ 0.87
LMX1B-204ENST00000561065 NSFL1CQ9UNZ2 370 aaKnown RBP20.48■□□□□ 0.87
LMX1B-204ENST00000561065 ZNF521Q96K83 1311 aa20.47■□□□□ 0.87
LMX1B-204ENST00000561065 CREBZFQ9NS37 354 aa20.47■□□□□ 0.87
LMX1B-204ENST00000561065 RAD17O75943 681 aa20.46■□□□□ 0.87
LMX1B-204ENST00000561065 LMOD1P29536 600 aaPredicted RBP20.46■□□□□ 0.87
LMX1B-204ENST00000561065 CTSWP56202 376 aa20.46■□□□□ 0.87
LMX1B-204ENST00000561065 CCDC152Q4G0S7 254 aa20.46■□□□□ 0.87
LMX1B-204ENST00000561065 GPRC5DQ9NZD1 345 aa20.46■□□□□ 0.87
LMX1B-204ENST00000561065 CLEC11AQ9Y240 323 aa20.46■□□□□ 0.87
LMX1B-204ENST00000561065 ZNF646O15015 1829 aaPredicted RBP20.46■□□□□ 0.87
LMX1B-204ENST00000561065 TRPM7Q96QT4 1865 aa20.45■□□□□ 0.87
LMX1B-204ENST00000561065 A0A1B0GUL6 1792 aa20.45■□□□□ 0.86
LMX1B-204ENST00000561065 GMPSP49915 693 aaPredicted RBP20.45■□□□□ 0.86
LMX1B-204ENST00000561065 CIAPIN1Q6FI81 312 aa20.45■□□□□ 0.86
LMX1B-204ENST00000561065 TBC1D16Q8TBP0 767 aa20.45■□□□□ 0.86
LMX1B-204ENST00000561065 SHTN1A0MZ66 631 aa20.44■□□□□ 0.86
LMX1B-204ENST00000561065 HSP90B1P14625 803 aaKnown RBP20.44■□□□□ 0.86
LMX1B-204ENST00000561065 NEXNQ0ZGT2 675 aa20.44■□□□□ 0.86
LMX1B-204ENST00000561065 FKBP5Q13451 457 aaPredicted RBP20.44■□□□□ 0.86
LMX1B-204ENST00000561065 DBNDD1Q9H9R9 158 aa20.44■□□□□ 0.86
LMX1B-204ENST00000561065 RTL9Q8NET4 1388 aa20.43■□□□□ 0.86
LMX1B-204ENST00000561065 RIMBP2O15034 1052 aa20.43■□□□□ 0.86
LMX1B-204ENST00000561065 CASP7P55210 303 aa20.43■□□□□ 0.86
LMX1B-204ENST00000561065 WASHC4Q2M389 1173 aa20.43■□□□□ 0.86
LMX1B-204ENST00000561065 UBE3BQ7Z3V4 1068 aa20.43■□□□□ 0.86
LMX1B-204ENST00000561065 CNTROBQ8N137 903 aa20.43■□□□□ 0.86
LMX1B-204ENST00000561065 TTLL11Q8NHH1 800 aa20.43■□□□□ 0.86
LMX1B-204ENST00000561065 DNAAF4Q8WXU2 420 aa20.43■□□□□ 0.86
LMX1B-204ENST00000561065 PODXL2Q9NZ53 605 aa20.43■□□□□ 0.86
LMX1B-204ENST00000561065 C6orf229H3BNL8 230 aa20.42■□□□□ 0.86
LMX1B-204ENST00000561065 H7C1W4 665 aa20.42■□□□□ 0.86
LMX1B-204ENST00000561065 FMR1Q06787 632 aaKnown RBP eCLIP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms