RNA–Protein interactions for RNA: ENST00000561059.5

PSME1-208, Transcript of proteasome activator subunit 1, humanhuman

TSL 2

Gene PSME1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-208ENST00000561059 GRAPLQ8TC17 118 aaPredicted RBP17.44■□□□□ 0.38
PSME1-208ENST00000561059 PRKRIP1Q9H875 184 aaPredicted RBP17.44■□□□□ 0.38
PSME1-208ENST00000561059 LAMB2P55268 1798 aa17.43■□□□□ 0.38
PSME1-208ENST00000561059 APAF1O14727 1248 aa17.43■□□□□ 0.38
PSME1-208ENST00000561059 ANKRD13DQ6ZTN6 518 aa17.43■□□□□ 0.38
PSME1-208ENST00000561059 CFAP44Q96MT7 982 aa17.43■□□□□ 0.38
PSME1-208ENST00000561059 RTFDC1Q9BY42 306 aaPredicted RBP17.43■□□□□ 0.38
PSME1-208ENST00000561059 ZNRF3Q9ULT6 936 aa17.43■□□□□ 0.38
PSME1-208ENST00000561059 TAF1P21675 1872 aa17.42■□□□□ 0.38
PSME1-208ENST00000561059 SHTN1A0MZ66 631 aa17.42■□□□□ 0.38
PSME1-208ENST00000561059 GMPSP49915 693 aaPredicted RBP17.42■□□□□ 0.38
PSME1-208ENST00000561059 GRM1Q13255 1194 aa17.42■□□□□ 0.38
PSME1-208ENST00000561059 SUPT20HQ8NEM7 779 aa17.42■□□□□ 0.38
PSME1-208ENST00000561059 CELF1Q92879 486 aaKnown RBP17.42■□□□□ 0.38
PSME1-208ENST00000561059 ISCA1Q9BUE6 129 aa17.42■□□□□ 0.38
PSME1-208ENST00000561059 DBF4Q9UBU7 674 aaPredicted RBP17.42■□□□□ 0.38
PSME1-208ENST00000561059 COL4A1P02462 1669 aa17.42■□□□□ 0.38
PSME1-208ENST00000561059 DEFB115Q30KQ5 88 aa17.41■□□□□ 0.38
PSME1-208ENST00000561059 JARID2Q92833 1246 aaPredicted RBP17.41■□□□□ 0.38
PSME1-208ENST00000561059 PHAXQ9H814 394 aaKnown RBP17.41■□□□□ 0.38
PSME1-208ENST00000561059 GPRC5DQ9NZD1 345 aa17.41■□□□□ 0.38
PSME1-208ENST00000561059 KIAA2012Q0VF49 1180 aa17.4■□□□□ 0.38
PSME1-208ENST00000561059 PAXIP1Q6ZW49 1069 aaPredicted RBP17.4■□□□□ 0.38
PSME1-208ENST00000561059 GPR101Q96P66 508 aaPredicted RBP17.4■□□□□ 0.38
PSME1-208ENST00000561059 HYPKQ9NX55 129 aa17.4■□□□□ 0.38
PSME1-208ENST00000561059 RASSF10A6NK89 507 aa17.39■□□□□ 0.37
PSME1-208ENST00000561059 YDJCA8MPS7 323 aa17.39■□□□□ 0.37
PSME1-208ENST00000561059 RIMBP2O15034 1052 aa17.39■□□□□ 0.37
PSME1-208ENST00000561059 HOXB7P09629 217 aa17.39■□□□□ 0.37
PSME1-208ENST00000561059 CIAPIN1Q6FI81 312 aa17.39■□□□□ 0.37
PSME1-208ENST00000561059 USP50Q70EL3 339 aaPredicted RBP17.39■□□□□ 0.37
PSME1-208ENST00000561059 AIDAQ96BJ3 306 aa17.39■□□□□ 0.37
PSME1-208ENST00000561059 BCL2L13Q9BXK5 485 aa17.39■□□□□ 0.37
PSME1-208ENST00000561059 ADARB2Q9NS39 739 aaKnown RBP17.39■□□□□ 0.37
PSME1-208ENST00000561059 DUOX1Q9NRD9 1551 aa17.39■□□□□ 0.37
PSME1-208ENST00000561059 IRS4O14654 1257 aaPredicted RBP17.38■□□□□ 0.37
PSME1-208ENST00000561059 ZNF853P0CG23 659 aa17.38■□□□□ 0.37
PSME1-208ENST00000561059 CST9Q5W186 159 aa17.38■□□□□ 0.37
PSME1-208ENST00000561059 RIC3Q7Z5B4 369 aa17.38■□□□□ 0.37
PSME1-208ENST00000561059 TRPM4Q8TD43 1214 aa17.38■□□□□ 0.37
PSME1-208ENST00000561059 DBNDD1Q9H9R9 158 aa17.38■□□□□ 0.37
PSME1-208ENST00000561059 NSFL1CQ9UNZ2 370 aaKnown RBP17.38■□□□□ 0.37
PSME1-208ENST00000561059 ZBTB12Q9Y330 459 aaPredicted RBP17.38■□□□□ 0.37
PSME1-208ENST00000561059 WDR33Q9C0J8 1336 aaKnown RBP17.38■□□□□ 0.37
PSME1-208ENST00000561059 DDX60Q8IY21 1712 aaKnown RBP17.38■□□□□ 0.37
PSME1-208ENST00000561059 HIRAP54198 1017 aaPredicted RBP17.37■□□□□ 0.37
PSME1-208ENST00000561059 GPSM2P81274 684 aa17.37■□□□□ 0.37
PSME1-208ENST00000561059 CYP4F22Q6NT55 531 aa17.37■□□□□ 0.37
PSME1-208ENST00000561059 C8orf58Q8NAV2 365 aa17.37■□□□□ 0.37
PSME1-208ENST00000561059 CCDC85AQ96PX6 553 aaPredicted RBP17.37■□□□□ 0.37
PSME1-208ENST00000561059 MYD88Q99836 296 aa17.37■□□□□ 0.37
PSME1-208ENST00000561059 GLIS2Q9BZE0 524 aaPredicted RBP17.37■□□□□ 0.37
PSME1-208ENST00000561059 VPS33BQ9H267 617 aa17.37■□□□□ 0.37
PSME1-208ENST00000561059 WBP1LQ9NX94 342 aa17.37■□□□□ 0.37
PSME1-208ENST00000561059 C6orf229H3BNL8 230 aa17.36■□□□□ 0.37
PSME1-208ENST00000561059 LBX1P52954 281 aa17.36■□□□□ 0.37
PSME1-208ENST00000561059 GOLGA2Q08379 1002 aa17.36■□□□□ 0.37
PSME1-208ENST00000561059 SF3B3Q15393 1217 aaKnown RBP17.36■□□□□ 0.37
PSME1-208ENST00000561059 DOK7Q18PE1 504 aa17.36■□□□□ 0.37
PSME1-208ENST00000561059 CCDC184Q52MB2 194 aa17.36■□□□□ 0.37
PSME1-208ENST00000561059 DLK2Q6UY11 383 aa17.36■□□□□ 0.37
PSME1-208ENST00000561059 SEC31BQ9NQW1 1179 aa17.36■□□□□ 0.37
PSME1-208ENST00000561059 KCNQ5Q9NR82 932 aa17.36■□□□□ 0.37
PSME1-208ENST00000561059 IFT57Q9NWB7 429 aa17.36■□□□□ 0.37
PSME1-208ENST00000561059 CTCFP49711 727 aaPredicted RBP17.35■□□□□ 0.37
PSME1-208ENST00000561059 TNIP1Q15025 636 aa17.35■□□□□ 0.37
PSME1-208ENST00000561059 WASHC4Q2M389 1173 aa17.35■□□□□ 0.37
PSME1-208ENST00000561059 CAPNS2Q96L46 248 aa17.35■□□□□ 0.37
PSME1-208ENST00000561059 ZNF408Q9H9D4 720 aa17.35■□□□□ 0.37
PSME1-208ENST00000561059 POLLQ9UGP5 575 aa17.35■□□□□ 0.37
PSME1-208ENST00000561059 PSMD14O00487 310 aa17.34■□□□□ 0.37
PSME1-208ENST00000561059 CELF2O95319 508 aaKnown RBP17.34■□□□□ 0.37
PSME1-208ENST00000561059 GNAI1P63096 354 aa17.34■□□□□ 0.37
PSME1-208ENST00000561059 TSPYL6Q8N831 410 aa17.34■□□□□ 0.37
PSME1-208ENST00000561059 CNOT7Q9UIV1 285 aaKnown RBP17.34■□□□□ 0.37
PSME1-208ENST00000561059 AOC2O75106 756 aa17.33■□□□□ 0.36
PSME1-208ENST00000561059 SAMD7Q7Z3H4 446 aa17.33■□□□□ 0.36
PSME1-208ENST00000561059 TMC4Q7Z404 712 aa17.33■□□□□ 0.36
PSME1-208ENST00000561059 MICALL2Q8IY33 904 aa17.33■□□□□ 0.36
PSME1-208ENST00000561059 TSR2Q969E8 191 aaKnown RBP17.33■□□□□ 0.36
PSME1-208ENST00000561059 EGFRP00533 1210 aa17.32■□□□□ 0.36
PSME1-208ENST00000561059 HSPA8P11142 646 aaKnown RBP17.32■□□□□ 0.36
PSME1-208ENST00000561059 RPS8P62241 208 aaKnown RBP17.32■□□□□ 0.36
PSME1-208ENST00000561059 TRIM28Q13263 835 aaKnown RBP17.32■□□□□ 0.36
PSME1-208ENST00000561059 TBC1D10BQ4KMP7 808 aaPredicted RBP17.32■□□□□ 0.36
PSME1-208ENST00000561059 ZBTB38Q8NAP3 1195 aaPredicted RBP17.32■□□□□ 0.36
PSME1-208ENST00000561059 PRDM10Q9NQV6 1147 aa17.32■□□□□ 0.36
PSME1-208ENST00000561059 TSKSQ9UJT2 592 aa17.32■□□□□ 0.36
PSME1-208ENST00000561059 TLL2Q9Y6L7 1015 aa17.32■□□□□ 0.36
PSME1-208ENST00000561059 LRRC37AA6NMS7 1700 aa17.32■□□□□ 0.36
PSME1-208ENST00000561059 ECE2O60344 883 aa17.31■□□□□ 0.36
PSME1-208ENST00000561059 RBM26Q5T8P6 1007 aaKnown RBP17.31■□□□□ 0.36
PSME1-208ENST00000561059 TBC1D16Q8TBP0 767 aa17.31■□□□□ 0.36
PSME1-208ENST00000561059 H7C1D1 291 aa17.3■□□□□ 0.36
PSME1-208ENST00000561059 CALD1Q05682 793 aaKnown RBP17.3■□□□□ 0.36
PSME1-208ENST00000561059 USP48Q86UV5 1035 aa17.3■□□□□ 0.36
PSME1-208ENST00000561059 RTL9Q8NET4 1388 aa17.29■□□□□ 0.36
PSME1-208ENST00000561059 CDHR2Q9BYE9 1310 aa17.29■□□□□ 0.36
PSME1-208ENST00000561059 UFL1O94874 794 aa17.29■□□□□ 0.36
PSME1-208ENST00000561059 MAP2K1Q02750 393 aaPredicted RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms