RNA–Protein interactions for RNA: ENST00000560884.5

CPNE6-219, Transcript of copine 6, humanhuman

TSL 4

Gene CPNE6, Length 575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-219ENST00000560884 GRAPQ13588 217 aa16.8■□□□□ 0.28
CPNE6-219ENST00000560884 DDX46Q7L014 1031 aaKnown RBP16.8■□□□□ 0.28
CPNE6-219ENST00000560884 GRAPLQ8TC17 118 aaPredicted RBP16.8■□□□□ 0.28
CPNE6-219ENST00000560884 DNAAF4Q8WXU2 420 aa16.8■□□□□ 0.28
CPNE6-219ENST00000560884 JARID2Q92833 1246 aaPredicted RBP16.8■□□□□ 0.28
CPNE6-219ENST00000560884 ZNF277Q9NRM2 450 aaPredicted RBP16.8■□□□□ 0.28
CPNE6-219ENST00000560884 KDM2BQ8NHM5 1336 aa16.79■□□□□ 0.28
CPNE6-219ENST00000560884 GLTPD2A6NH11 291 aa16.79■□□□□ 0.28
CPNE6-219ENST00000560884 C1QTNF8P60827 252 aa16.79■□□□□ 0.28
CPNE6-219ENST00000560884 SCN4AP35499 1836 aa16.79■□□□□ 0.28
CPNE6-219ENST00000560884 A0A1B0GUL6 1792 aa16.79■□□□□ 0.28
CPNE6-219ENST00000560884 F6X3S4 739 aa16.78■□□□□ 0.28
CPNE6-219ENST00000560884 BBOX1O75936 387 aa16.78■□□□□ 0.28
CPNE6-219ENST00000560884 IARSP41252 1262 aaKnown RBP16.78■□□□□ 0.28
CPNE6-219ENST00000560884 GRIPAP1Q4V328 841 aa16.78■□□□□ 0.28
CPNE6-219ENST00000560884 LINS1Q8NG48 757 aa16.78■□□□□ 0.28
CPNE6-219ENST00000560884 CELF1Q92879 486 aaKnown RBP16.78■□□□□ 0.28
CPNE6-219ENST00000560884 H7C1W4 665 aa16.77■□□□□ 0.28
CPNE6-219ENST00000560884 PDE8AO60658 829 aa16.77■□□□□ 0.28
CPNE6-219ENST00000560884 CASP7P55210 303 aa16.77■□□□□ 0.28
CPNE6-219ENST00000560884 GCKRQ14397 625 aa16.77■□□□□ 0.28
CPNE6-219ENST00000560884 SP8Q8IXZ3 490 aa16.77■□□□□ 0.28
CPNE6-219ENST00000560884 HSP90B1P14625 803 aaKnown RBP16.76■□□□□ 0.27
CPNE6-219ENST00000560884 BEND3Q5T5X7 828 aa16.76■□□□□ 0.27
CPNE6-219ENST00000560884 UBE3BQ7Z3V4 1068 aa16.76■□□□□ 0.27
CPNE6-219ENST00000560884 TMC4Q7Z404 712 aa16.76■□□□□ 0.27
CPNE6-219ENST00000560884 MRPL50Q8N5N7 158 aaKnown RBP16.76■□□□□ 0.27
CPNE6-219ENST00000560884 RTFDC1Q9BY42 306 aaPredicted RBP16.76■□□□□ 0.27
CPNE6-219ENST00000560884 RTL9Q8NET4 1388 aa16.76■□□□□ 0.27
CPNE6-219ENST00000560884 ZNF541Q9H0D2 1346 aa16.75■□□□□ 0.27
CPNE6-219ENST00000560884 CTSWP56202 376 aa16.75■□□□□ 0.27
CPNE6-219ENST00000560884 SSH1Q8WYL5 1049 aa16.75■□□□□ 0.27
CPNE6-219ENST00000560884 SEC31BQ9NQW1 1179 aa16.75■□□□□ 0.27
CPNE6-219ENST00000560884 POTECB2RU33 542 aa16.74■□□□□ 0.27
CPNE6-219ENST00000560884 CCDC152Q4G0S7 254 aa16.74■□□□□ 0.27
CPNE6-219ENST00000560884 RRAGCQ9HB90 399 aa16.74■□□□□ 0.27
CPNE6-219ENST00000560884 ADAMTSL1Q8N6G6 1762 aa16.74■□□□□ 0.27
CPNE6-219ENST00000560884 FZD9O00144 591 aa16.73■□□□□ 0.27
CPNE6-219ENST00000560884 TTLL11Q8NHH1 800 aa16.73■□□□□ 0.27
CPNE6-219ENST00000560884 PLA2G12BQ9BX93 195 aa16.73■□□□□ 0.27
CPNE6-219ENST00000560884 PSME4Q14997 1843 aa16.73■□□□□ 0.27
CPNE6-219ENST00000560884 DDNO94850 711 aaPredicted RBP16.72■□□□□ 0.27
CPNE6-219ENST00000560884 RPS8P62241 208 aaKnown RBP16.72■□□□□ 0.27
CPNE6-219ENST00000560884 ALDH1L2Q3SY69 923 aa16.72■□□□□ 0.27
CPNE6-219ENST00000560884 DPY19L2Q6NUT2 758 aa16.72■□□□□ 0.27
CPNE6-219ENST00000560884 DPP8Q6V1X1 898 aaPredicted RBP16.72■□□□□ 0.27
CPNE6-219ENST00000560884 MPNDQ8N594 471 aa16.72■□□□□ 0.27
CPNE6-219ENST00000560884 CCDC85AQ96PX6 553 aaPredicted RBP16.72■□□□□ 0.27
CPNE6-219ENST00000560884 ZNF646O15015 1829 aaPredicted RBP16.71■□□□□ 0.27
CPNE6-219ENST00000560884 TOMM70O94826 608 aa16.71■□□□□ 0.27
CPNE6-219ENST00000560884 CT47B1P0C2W7 299 aaPredicted RBP16.71■□□□□ 0.27
CPNE6-219ENST00000560884 AOC3Q16853 763 aa16.71■□□□□ 0.27
CPNE6-219ENST00000560884 L3MBTL3Q96JM7 780 aaPredicted RBP16.71■□□□□ 0.27
CPNE6-219ENST00000560884 BCL2L13Q9BXK5 485 aa16.71■□□□□ 0.27
CPNE6-219ENST00000560884 SCN9AQ15858 1988 aa16.71■□□□□ 0.27
CPNE6-219ENST00000560884 PTPRCP08575 1304 aa16.7■□□□□ 0.26
CPNE6-219ENST00000560884 PPIP5K2O43314 1243 aa16.7■□□□□ 0.26
CPNE6-219ENST00000560884 LARGE2Q8N3Y3 721 aa16.7■□□□□ 0.26
CPNE6-219ENST00000560884 SUPT20HQ8NEM7 779 aa16.7■□□□□ 0.26
CPNE6-219ENST00000560884 TMX4Q9H1E5 349 aaPredicted RBP16.7■□□□□ 0.26
CPNE6-219ENST00000560884 VPS33BQ9H267 617 aa16.7■□□□□ 0.26
CPNE6-219ENST00000560884 GREM2Q9H772 168 aa16.7■□□□□ 0.26
CPNE6-219ENST00000560884 ALDH1L1O75891 902 aa16.69■□□□□ 0.26
CPNE6-219ENST00000560884 VEGFAP15692 232 aaPredicted RBP16.69■□□□□ 0.26
CPNE6-219ENST00000560884 GPSM2P81274 684 aa16.69■□□□□ 0.26
CPNE6-219ENST00000560884 HNRNPUQ00839 825 aaKnown RBP eCLIP16.69■□□□□ 0.26
CPNE6-219ENST00000560884 KIAA2012Q0VF49 1180 aa16.69■□□□□ 0.26
CPNE6-219ENST00000560884 RBM46Q8TBY0 533 aaKnown RBP16.69■□□□□ 0.26
CPNE6-219ENST00000560884 JDP2Q8WYK2 163 aa16.69■□□□□ 0.26
CPNE6-219ENST00000560884 GRM8O00222 908 aa16.68■□□□□ 0.26
CPNE6-219ENST00000560884 CSF1RP07333 972 aa16.68■□□□□ 0.26
CPNE6-219ENST00000560884 FOXO4P98177 505 aa16.68■□□□□ 0.26
CPNE6-219ENST00000560884 FAM161AQ3B820 660 aa16.68■□□□□ 0.26
CPNE6-219ENST00000560884 SLC4A10Q6U841 1118 aa16.68■□□□□ 0.26
CPNE6-219ENST00000560884 SRCIN1Q9C0H9 1055 aa16.68■□□□□ 0.26
CPNE6-219ENST00000560884 SMC4Q9NTJ3 1288 aa16.68■□□□□ 0.26
CPNE6-219ENST00000560884 PODXL2Q9NZ53 605 aa16.68■□□□□ 0.26
CPNE6-219ENST00000560884 POLLQ9UGP5 575 aa16.68■□□□□ 0.26
CPNE6-219ENST00000560884 BRPF1P55201 1214 aaPredicted RBP16.67■□□□□ 0.26
CPNE6-219ENST00000560884 ANKRD18AQ8IVF6 992 aa16.67■□□□□ 0.26
CPNE6-219ENST00000560884 NIM1KQ8IY84 436 aa16.67■□□□□ 0.26
CPNE6-219ENST00000560884 GPC2Q8N158 579 aa16.67■□□□□ 0.26
CPNE6-219ENST00000560884 CDC5LQ99459 802 aaKnown RBP16.67■□□□□ 0.26
CPNE6-219ENST00000560884 NSFL1CQ9UNZ2 370 aaKnown RBP16.67■□□□□ 0.26
CPNE6-219ENST00000560884 UTYO14607 1347 aa16.67■□□□□ 0.26
CPNE6-219ENST00000560884 EPHA10Q5JZY3 1008 aa16.66■□□□□ 0.26
CPNE6-219ENST00000560884 TBC1D16Q8TBP0 767 aa16.66■□□□□ 0.26
CPNE6-219ENST00000560884 ITGA6P23229 1130 aa16.65■□□□□ 0.26
CPNE6-219ENST00000560884 RARSP54136 660 aaKnown RBP16.65■□□□□ 0.26
CPNE6-219ENST00000560884 C16orf71Q8IYS4 520 aaPredicted RBP16.65■□□□□ 0.26
CPNE6-219ENST00000560884 BSDC1Q9NW68 430 aaPredicted RBP16.65■□□□□ 0.26
CPNE6-219ENST00000560884 ZBED9Q6R2W3 1325 aa16.65■□□□□ 0.26
CPNE6-219ENST00000560884 YDJCA8MPS7 323 aa16.64■□□□□ 0.25
CPNE6-219ENST00000560884 EIF6P56537 245 aaKnown RBP16.64■□□□□ 0.25
CPNE6-219ENST00000560884 KAZALD1Q96I82 304 aa16.64■□□□□ 0.25
CPNE6-219ENST00000560884 GPR101Q96P66 508 aaPredicted RBP16.64■□□□□ 0.25
CPNE6-219ENST00000560884 ZNRF3Q9ULT6 936 aa16.64■□□□□ 0.25
CPNE6-219ENST00000560884 CEP350Q5VT06 3117 aa16.64■□□□□ 0.25
CPNE6-219ENST00000560884 XDHP47989 1333 aa16.64■□□□□ 0.25
CPNE6-219ENST00000560884 IQCA1LA6NCM1 817 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms