RNA–Protein interactions for RNA: ENST00000560708.5

MRPS11-209, Transcript of mitochondrial ribosomal protein S11, humanhuman

TSL 2

Gene MRPS11, Length 1,060 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS11-209ENST00000560708 DPP8Q6V1X1 898 aaPredicted RBP17.79■□□□□ 0.44
MRPS11-209ENST00000560708 PNMA8AQ86V59 439 aaPredicted RBP17.79■□□□□ 0.44
MRPS11-209ENST00000560708 PHAXQ9H814 394 aaKnown RBP17.79■□□□□ 0.44
MRPS11-209ENST00000560708 TAF1P21675 1872 aa17.78■□□□□ 0.44
MRPS11-209ENST00000560708 LMOD1P29536 600 aaPredicted RBP17.78■□□□□ 0.44
MRPS11-209ENST00000560708 SCNN1DP51172 638 aa17.78■□□□□ 0.44
MRPS11-209ENST00000560708 GOLGA2Q08379 1002 aa17.78■□□□□ 0.44
MRPS11-209ENST00000560708 MAP1SQ66K74 1059 aaPredicted RBP17.78■□□□□ 0.44
MRPS11-209ENST00000560708 RIC3Q7Z5B4 369 aa17.78■□□□□ 0.44
MRPS11-209ENST00000560708 SP8Q8IXZ3 490 aa17.78■□□□□ 0.44
MRPS11-209ENST00000560708 C8orf58Q8NAV2 365 aa17.78■□□□□ 0.44
MRPS11-209ENST00000560708 MKRN1Q9UHC7 482 aaKnown RBP17.78■□□□□ 0.44
MRPS11-209ENST00000560708 ITGBL1O95965 494 aaPredicted RBP17.77■□□□□ 0.44
MRPS11-209ENST00000560708 MPNDQ8N594 471 aa17.77■□□□□ 0.44
MRPS11-209ENST00000560708 SUPT20HQ8NEM7 779 aa17.77■□□□□ 0.44
MRPS11-209ENST00000560708 RTFDC1Q9BY42 306 aaPredicted RBP17.77■□□□□ 0.44
MRPS11-209ENST00000560708 DUOX1Q9NRD9 1551 aa17.77■□□□□ 0.44
MRPS11-209ENST00000560708 LRRC37AA6NMS7 1700 aa17.77■□□□□ 0.44
MRPS11-209ENST00000560708 COL4A1P02462 1669 aa17.77■□□□□ 0.43
MRPS11-209ENST00000560708 ZNF316A6NFI3 1004 aaPredicted RBP17.76■□□□□ 0.43
MRPS11-209ENST00000560708 IRS4O14654 1257 aaPredicted RBP17.75■□□□□ 0.43
MRPS11-209ENST00000560708 HSPA1AP0DMV8 641 aaKnown RBP17.75■□□□□ 0.43
MRPS11-209ENST00000560708 HSPA1BP0DMV9 641 aaKnown RBP17.75■□□□□ 0.43
MRPS11-209ENST00000560708 EPS15P42566 896 aa17.75■□□□□ 0.43
MRPS11-209ENST00000560708 CELF1Q92879 486 aaKnown RBP17.75■□□□□ 0.43
MRPS11-209ENST00000560708 TSR2Q969E8 191 aaKnown RBP17.75■□□□□ 0.43
MRPS11-209ENST00000560708 MYD88Q99836 296 aa17.75■□□□□ 0.43
MRPS11-209ENST00000560708 VPS33BQ9H267 617 aa17.75■□□□□ 0.43
MRPS11-209ENST00000560708 CXCL9Q07325 125 aa17.74■□□□□ 0.43
MRPS11-209ENST00000560708 KIAA2012Q0VF49 1180 aa17.74■□□□□ 0.43
MRPS11-209ENST00000560708 TRIM28Q13263 835 aaKnown RBP17.74■□□□□ 0.43
MRPS11-209ENST00000560708 SF3B3Q15393 1217 aaKnown RBP17.74■□□□□ 0.43
MRPS11-209ENST00000560708 CNTROBQ8N137 903 aa17.74■□□□□ 0.43
MRPS11-209ENST00000560708 TSPYL6Q8N831 410 aa17.74■□□□□ 0.43
MRPS11-209ENST00000560708 ZNRF3Q9ULT6 936 aa17.74■□□□□ 0.43
MRPS11-209ENST00000560708 CNTNAP1P78357 1384 aa17.74■□□□□ 0.43
MRPS11-209ENST00000560708 TMEM88BA6NKF7 163 aa17.73■□□□□ 0.43
MRPS11-209ENST00000560708 CCDC30Q5VVM6 783 aa17.73■□□□□ 0.43
MRPS11-209ENST00000560708 TMC4Q7Z404 712 aa17.73■□□□□ 0.43
MRPS11-209ENST00000560708 COL13A1Q5TAT6 717 aaPredicted RBP17.72■□□□□ 0.43
MRPS11-209ENST00000560708 ZBTB38Q8NAP3 1195 aaPredicted RBP17.72■□□□□ 0.43
MRPS11-209ENST00000560708 MRS2Q9HD23 443 aa17.72■□□□□ 0.43
MRPS11-209ENST00000560708 RAD17O75943 681 aa17.71■□□□□ 0.43
MRPS11-209ENST00000560708 GMPSP49915 693 aaPredicted RBP17.71■□□□□ 0.43
MRPS11-209ENST00000560708 CIAPIN1Q6FI81 312 aa17.71■□□□□ 0.43
MRPS11-209ENST00000560708 GPRC5DQ9NZD1 345 aa17.71■□□□□ 0.43
MRPS11-209ENST00000560708 NSFL1CQ9UNZ2 370 aaKnown RBP17.71■□□□□ 0.43
MRPS11-209ENST00000560708 DDX58O95786 925 aaKnown RBP17.7■□□□□ 0.42
MRPS11-209ENST00000560708 CCDC27Q2M243 656 aa17.7■□□□□ 0.42
MRPS11-209ENST00000560708 USP50Q70EL3 339 aaPredicted RBP17.7■□□□□ 0.42
MRPS11-209ENST00000560708 WWC1Q8IX03 1113 aa17.7■□□□□ 0.42
MRPS11-209ENST00000560708 JARID2Q92833 1246 aaPredicted RBP17.7■□□□□ 0.42
MRPS11-209ENST00000560708 YDJCA8MPS7 323 aa17.69■□□□□ 0.42
MRPS11-209ENST00000560708 GPSM2P81274 684 aa17.69■□□□□ 0.42
MRPS11-209ENST00000560708 FMR1Q06787 632 aaKnown RBP eCLIP17.69■□□□□ 0.42
MRPS11-209ENST00000560708 CCDC191Q8NCU4 936 aa17.69■□□□□ 0.42
MRPS11-209ENST00000560708 METTL22Q9BUU2 404 aaPredicted RBP17.69■□□□□ 0.42
MRPS11-209ENST00000560708 SEC31BQ9NQW1 1179 aa17.69■□□□□ 0.42
MRPS11-209ENST00000560708 ADARB2Q9NS39 739 aaKnown RBP17.69■□□□□ 0.42
MRPS11-209ENST00000560708 CWC25Q9NXE8 425 aaPredicted RBP17.69■□□□□ 0.42
MRPS11-209ENST00000560708 MAP3K2Q9Y2U5 619 aa17.69■□□□□ 0.42
MRPS11-209ENST00000560708 C6orf229H3BNL8 230 aa17.68■□□□□ 0.42
MRPS11-209ENST00000560708 RIMBP2O15034 1052 aa17.68■□□□□ 0.42
MRPS11-209ENST00000560708 ANP32CO43423 234 aa17.68■□□□□ 0.42
MRPS11-209ENST00000560708 PCCAP05165 728 aaPredicted RBP17.68■□□□□ 0.42
MRPS11-209ENST00000560708 VEGFBP49765 207 aa17.68■□□□□ 0.42
MRPS11-209ENST00000560708 WASHC4Q2M389 1173 aa17.68■□□□□ 0.42
MRPS11-209ENST00000560708 GPR101Q96P66 508 aaPredicted RBP17.68■□□□□ 0.42
MRPS11-209ENST00000560708 CCDC85AQ96PX6 553 aaPredicted RBP17.68■□□□□ 0.42
MRPS11-209ENST00000560708 BCL2L13Q9BXK5 485 aa17.68■□□□□ 0.42
MRPS11-209ENST00000560708 STK31Q9BXU1 1019 aa17.68■□□□□ 0.42
MRPS11-209ENST00000560708 CHMP4AQ9BY43 222 aa17.68■□□□□ 0.42
MRPS11-209ENST00000560708 DBNDD1Q9H9R9 158 aa17.68■□□□□ 0.42
MRPS11-209ENST00000560708 RPS8P62241 208 aaKnown RBP17.67■□□□□ 0.42
MRPS11-209ENST00000560708 TNIP1Q15025 636 aa17.67■□□□□ 0.42
MRPS11-209ENST00000560708 TWISTNBQ3B726 338 aaPredicted RBP17.67■□□□□ 0.42
MRPS11-209ENST00000560708 POLLQ9UGP5 575 aa17.67■□□□□ 0.42
MRPS11-209ENST00000560708 ABT1Q9ULW3 272 aaKnown RBP17.67■□□□□ 0.42
MRPS11-209ENST00000560708 CDHR2Q9BYE9 1310 aa17.67■□□□□ 0.42
MRPS11-209ENST00000560708 PI4KAP2A4QPH2 592 aa17.66■□□□□ 0.42
MRPS11-209ENST00000560708 TRAF5O00463 557 aa17.66■□□□□ 0.42
MRPS11-209ENST00000560708 PDE8AO60658 829 aa17.66■□□□□ 0.42
MRPS11-209ENST00000560708 HSP90B1P14625 803 aaKnown RBP17.66■□□□□ 0.42
MRPS11-209ENST00000560708 CCDC152Q4G0S7 254 aa17.66■□□□□ 0.42
MRPS11-209ENST00000560708 PI4KAP1Q8N8J0 262 aa17.66■□□□□ 0.42
MRPS11-209ENST00000560708 SALL2Q9Y467 1007 aaPredicted RBP17.66■□□□□ 0.42
MRPS11-209ENST00000560708 SHTN1A0MZ66 631 aa17.65■□□□□ 0.42
MRPS11-209ENST00000560708 RASSF10A6NK89 507 aa17.65■□□□□ 0.42
MRPS11-209ENST00000560708 IGKV5-2P06315 115 aa17.65■□□□□ 0.42
MRPS11-209ENST00000560708 KSR2Q6VAB6 950 aa17.65■□□□□ 0.42
MRPS11-209ENST00000560708 TBC1D16Q8TBP0 767 aa17.65■□□□□ 0.42
MRPS11-209ENST00000560708 TRPM4Q8TD43 1214 aa17.65■□□□□ 0.42
MRPS11-209ENST00000560708 ZBTB12Q9Y330 459 aaPredicted RBP17.65■□□□□ 0.42
MRPS11-209ENST00000560708 IL16Q14005 1332 aa17.65■□□□□ 0.42
MRPS11-209ENST00000560708 FANCIQ9NVI1 1328 aa17.65■□□□□ 0.42
MRPS11-209ENST00000560708 ECE2O60344 883 aa17.64■□□□□ 0.41
MRPS11-209ENST00000560708 DOK7Q18PE1 504 aa17.64■□□□□ 0.41
MRPS11-209ENST00000560708 G2E3Q7L622 706 aa17.64■□□□□ 0.41
MRPS11-209ENST00000560708 EYA3Q99504 573 aa17.64■□□□□ 0.41
MRPS11-209ENST00000560708 PSMD14O00487 310 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms