RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 CNTROBQ8N137 903 aa13.27□□□□□ -0.29
SNRPA1-211ENST00000560433 SLKQ9H2G2 1235 aaPredicted RBP13.27□□□□□ -0.29
SNRPA1-211ENST00000560433 ANO2Q9NQ90 1003 aa13.27□□□□□ -0.29
SNRPA1-211ENST00000560433 LRRC4BQ9NT99 713 aa13.27□□□□□ -0.29
SNRPA1-211ENST00000560433 AOX1Q06278 1338 aa13.26□□□□□ -0.29
SNRPA1-211ENST00000560433 EYA2O00167 538 aa13.26□□□□□ -0.29
SNRPA1-211ENST00000560433 CSF1RP07333 972 aa13.26□□□□□ -0.29
SNRPA1-211ENST00000560433 USPL1Q5W0Q7 1092 aa13.26□□□□□ -0.29
SNRPA1-211ENST00000560433 GPATCH3Q96I76 525 aa13.26□□□□□ -0.29
SNRPA1-211ENST00000560433 AK9Q5TCS8 1911 aa13.26□□□□□ -0.29
SNRPA1-211ENST00000560433 COL5A3P25940 1745 aaPredicted RBP13.26□□□□□ -0.29
SNRPA1-211ENST00000560433 CTSWP56202 376 aa13.25□□□□□ -0.29
SNRPA1-211ENST00000560433 NBR1Q14596 966 aa13.25□□□□□ -0.29
SNRPA1-211ENST00000560433 KRT27Q7Z3Y8 459 aa13.25□□□□□ -0.29
SNRPA1-211ENST00000560433 ANKRD36CQ5JPF3 1778 aa13.25□□□□□ -0.29
SNRPA1-211ENST00000560433 USP42Q9H9J4 1324 aaKnown RBP13.25□□□□□ -0.29
SNRPA1-211ENST00000560433 DNAJC2Q99543 621 aaKnown RBP13.25□□□□□ -0.29
SNRPA1-211ENST00000560433 UTP14AQ9BVJ6 771 aaKnown RBP13.25□□□□□ -0.29
SNRPA1-211ENST00000560433 SEC31BQ9NQW1 1179 aa13.25□□□□□ -0.29
SNRPA1-211ENST00000560433 SBF2Q86WG5 1849 aa13.25□□□□□ -0.29
SNRPA1-211ENST00000560433 TBC1D9BQ66K14 1250 aa13.24□□□□□ -0.29
SNRPA1-211ENST00000560433 LDHAL6AQ6ZMR3 332 aa13.24□□□□□ -0.29
SNRPA1-211ENST00000560433 SH3TC1Q8TE82 1336 aa13.24□□□□□ -0.29
SNRPA1-211ENST00000560433 NHSQ6T4R5 1651 aa13.24□□□□□ -0.29
SNRPA1-211ENST00000560433 PDE8AO60658 829 aa13.24□□□□□ -0.29
SNRPA1-211ENST00000560433 IL15P40933 162 aaPredicted RBP13.24□□□□□ -0.29
SNRPA1-211ENST00000560433 HELBQ8NG08 1087 aaPredicted RBP13.24□□□□□ -0.29
SNRPA1-211ENST00000560433 PLA2G12BQ9BX93 195 aa13.24□□□□□ -0.29
SNRPA1-211ENST00000560433 BRWD3Q6RI45 1802 aa13.24□□□□□ -0.29
SNRPA1-211ENST00000560433 CDHR2Q9BYE9 1310 aa13.24□□□□□ -0.29
SNRPA1-211ENST00000560433 A0A1B0GUL7 405 aa13.23□□□□□ -0.29
SNRPA1-211ENST00000560433 SNAP23O00161 211 aa13.23□□□□□ -0.29
SNRPA1-211ENST00000560433 REC8O95072 547 aa13.23□□□□□ -0.29
SNRPA1-211ENST00000560433 BECN1Q14457 450 aa13.23□□□□□ -0.29
SNRPA1-211ENST00000560433 FAM196AQ6ZSG2 479 aa13.23□□□□□ -0.29
SNRPA1-211ENST00000560433 BCL2L12Q9HB09 334 aa13.23□□□□□ -0.29
SNRPA1-211ENST00000560433 NTSR2O95665 410 aa13.23□□□□□ -0.29
SNRPA1-211ENST00000560433 ADORA1P30542 326 aa13.23□□□□□ -0.29
SNRPA1-211ENST00000560433 SLFNL1Q499Z3 407 aa13.23□□□□□ -0.29
SNRPA1-211ENST00000560433 ARHGEF1Q92888 912 aaKnown RBP13.23□□□□□ -0.29
SNRPA1-211ENST00000560433 FAM227BQ96M60 508 aa13.23□□□□□ -0.29
SNRPA1-211ENST00000560433 CNNM1Q9NRU3 951 aa13.23□□□□□ -0.29
SNRPA1-211ENST00000560433 ANKRD18BA2A2Z9 1011 aa13.22□□□□□ -0.29
SNRPA1-211ENST00000560433 ERFEQ4G0M1 354 aa13.22□□□□□ -0.29
SNRPA1-211ENST00000560433 BCL11BQ9C0K0 894 aaPredicted RBP13.22□□□□□ -0.29
SNRPA1-211ENST00000560433 FOXD4L1Q9NU39 408 aa13.22□□□□□ -0.29
SNRPA1-211ENST00000560433 CEP126Q9P2H0 1117 aa13.22□□□□□ -0.29
SNRPA1-211ENST00000560433 PALD1Q9ULE6 856 aa13.22□□□□□ -0.29
SNRPA1-211ENST00000560433 RTCBQ9Y3I0 505 aaKnown RBP13.22□□□□□ -0.29
SNRPA1-211ENST00000560433 CNTNAP4Q9C0A0 1308 aa13.22□□□□□ -0.29
SNRPA1-211ENST00000560433 RPS6KA4O75676 772 aa13.22□□□□□ -0.29
SNRPA1-211ENST00000560433 C3orf67Q6ZVT6 689 aa13.22□□□□□ -0.29
SNRPA1-211ENST00000560433 DDX46Q7L014 1031 aaKnown RBP13.22□□□□□ -0.29
SNRPA1-211ENST00000560433 FSD1Q9BTV5 496 aa13.22□□□□□ -0.29
SNRPA1-211ENST00000560433 DIAPH3Q9NSV4 1193 aa13.22□□□□□ -0.29
SNRPA1-211ENST00000560433 RREB1Q92766 1687 aa13.22□□□□□ -0.29
SNRPA1-211ENST00000560433 METTL24Q5JXM2 366 aa13.21□□□□□ -0.29
SNRPA1-211ENST00000560433 EVI5LQ96CN4 794 aa13.21□□□□□ -0.29
SNRPA1-211ENST00000560433 ZNF652Q9Y2D9 606 aa13.21□□□□□ -0.29
SNRPA1-211ENST00000560433 ZPR1O75312 459 aa13.21□□□□□ -0.3
SNRPA1-211ENST00000560433 GTF2E1P29083 439 aaPredicted RBP13.21□□□□□ -0.3
SNRPA1-211ENST00000560433 SNRKQ9NRH2 765 aa13.21□□□□□ -0.3
SNRPA1-211ENST00000560433 MYH3P11055 1940 aa13.21□□□□□ -0.3
SNRPA1-211ENST00000560433 TAF5LO75529 589 aa13.2□□□□□ -0.3
SNRPA1-211ENST00000560433 RIPOR2Q9Y4F9 1068 aa13.2□□□□□ -0.3
SNRPA1-211ENST00000560433 SGSM2O43147 1006 aa13.2□□□□□ -0.3
SNRPA1-211ENST00000560433 CIAO1O76071 339 aa13.2□□□□□ -0.3
SNRPA1-211ENST00000560433 ATP5JP18859 108 aa13.2□□□□□ -0.3
SNRPA1-211ENST00000560433 NMIQ13287 307 aaPredicted RBP13.2□□□□□ -0.3
SNRPA1-211ENST00000560433 PARP10Q53GL7 1025 aa13.2□□□□□ -0.3
SNRPA1-211ENST00000560433 AK7Q96M32 723 aa13.2□□□□□ -0.3
SNRPA1-211ENST00000560433 A0A0D9SFI3 127 aa13.19□□□□□ -0.3
SNRPA1-211ENST00000560433 GOLIM4O00461 696 aa13.19□□□□□ -0.3
SNRPA1-211ENST00000560433 PI16Q6UXB8 463 aa13.19□□□□□ -0.3
SNRPA1-211ENST00000560433 HSCBQ8IWL3 235 aa13.19□□□□□ -0.3
SNRPA1-211ENST00000560433 XAGE2Q96GT9 111 aa13.19□□□□□ -0.3
SNRPA1-211ENST00000560433 ANP32EQ9BTT0 268 aa13.19□□□□□ -0.3
SNRPA1-211ENST00000560433 ANTXR1Q9H6X2 564 aa13.19□□□□□ -0.3
SNRPA1-211ENST00000560433 NARFQ9UHQ1 456 aa13.19□□□□□ -0.3
SNRPA1-211ENST00000560433 RFC4P35249 363 aa13.19□□□□□ -0.3
SNRPA1-211ENST00000560433 RBM6P78332 1123 aaKnown RBP13.19□□□□□ -0.3
SNRPA1-211ENST00000560433 PTH1RQ03431 593 aa13.19□□□□□ -0.3
SNRPA1-211ENST00000560433 GORABQ5T7V8 394 aa13.19□□□□□ -0.3
SNRPA1-211ENST00000560433 RC3H1Q5TC82 1133 aaKnown RBP13.19□□□□□ -0.3
SNRPA1-211ENST00000560433 CLEC4GQ6UXB4 293 aa13.19□□□□□ -0.3
SNRPA1-211ENST00000560433 SEC62Q99442 399 aaKnown RBP13.19□□□□□ -0.3
SNRPA1-211ENST00000560433 TAF1P21675 1872 aa13.19□□□□□ -0.3
SNRPA1-211ENST00000560433 COL4A1P02462 1669 aa13.18□□□□□ -0.3
SNRPA1-211ENST00000560433 ZNF609O15014 1411 aa13.18□□□□□ -0.3
SNRPA1-211ENST00000560433 FKBP4Q02790 459 aaKnown RBP eCLIP13.18□□□□□ -0.3
SNRPA1-211ENST00000560433 SCARF1Q14162 830 aa13.18□□□□□ -0.3
SNRPA1-211ENST00000560433 TRAPPC3LQ5T215 181 aa13.18□□□□□ -0.3
SNRPA1-211ENST00000560433 CICQ96RK0 1608 aaPredicted RBP13.18□□□□□ -0.3
SNRPA1-211ENST00000560433 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.18□□□□□ -0.3
SNRPA1-211ENST00000560433 WTIPA6NIX2 430 aaPredicted RBP13.18□□□□□ -0.3
SNRPA1-211ENST00000560433 ZNF772Q68DY9 489 aaPredicted RBP13.18□□□□□ -0.3
SNRPA1-211ENST00000560433 NOL8Q76FK4 1167 aaKnown RBP13.18□□□□□ -0.3
SNRPA1-211ENST00000560433 PROM2Q8N271 834 aa13.18□□□□□ -0.3
SNRPA1-211ENST00000560433 SETDB2Q96T68 719 aa13.18□□□□□ -0.3
SNRPA1-211ENST00000560433 TAF1LQ8IZX4 1826 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms