RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 BCL2L13Q9BXK5 485 aa18.95■□□□□ 0.62
RABGGTA-211ENST00000559850 C1QTNF8P60827 252 aa18.94■□□□□ 0.62
RABGGTA-211ENST00000559850 RRAGCQ9HB90 399 aa18.94■□□□□ 0.62
RABGGTA-211ENST00000559850 SEC31BQ9NQW1 1179 aa18.94■□□□□ 0.62
RABGGTA-211ENST00000559850 ATP6V0A2Q9Y487 856 aa18.94■□□□□ 0.62
RABGGTA-211ENST00000559850 IARSP41252 1262 aaKnown RBP18.93■□□□□ 0.62
RABGGTA-211ENST00000559850 UBE3BQ7Z3V4 1068 aa18.93■□□□□ 0.62
RABGGTA-211ENST00000559850 TRMT2AQ8IZ69 625 aaKnown RBP18.93■□□□□ 0.62
RABGGTA-211ENST00000559850 MRPL50Q8N5N7 158 aaKnown RBP18.93■□□□□ 0.62
RABGGTA-211ENST00000559850 KDM2BQ8NHM5 1336 aa18.93■□□□□ 0.62
RABGGTA-211ENST00000559850 PDE8AO60658 829 aa18.92■□□□□ 0.62
RABGGTA-211ENST00000559850 BBOX1O75936 387 aa18.92■□□□□ 0.62
RABGGTA-211ENST00000559850 GCKRQ14397 625 aa18.92■□□□□ 0.62
RABGGTA-211ENST00000559850 CC2D2BQ6DHV5 1058 aa18.92■□□□□ 0.62
RABGGTA-211ENST00000559850 SSH1Q8WYL5 1049 aa18.92■□□□□ 0.62
RABGGTA-211ENST00000559850 CDHR2Q9BYE9 1310 aa18.92■□□□□ 0.62
RABGGTA-211ENST00000559850 ZC3H4Q9UPT8 1303 aaKnown RBP18.92■□□□□ 0.62
RABGGTA-211ENST00000559850 DUOX1Q9NRD9 1551 aa18.91■□□□□ 0.62
RABGGTA-211ENST00000559850 GLTPD2A6NH11 291 aa18.91■□□□□ 0.62
RABGGTA-211ENST00000559850 HNRNPUQ00839 825 aaKnown RBP eCLIP18.91■□□□□ 0.62
RABGGTA-211ENST00000559850 SP8Q8IXZ3 490 aa18.91■□□□□ 0.62
RABGGTA-211ENST00000559850 PSMD1Q99460 953 aa18.91■□□□□ 0.62
RABGGTA-211ENST00000559850 ZNF541Q9H0D2 1346 aa18.91■□□□□ 0.62
RABGGTA-211ENST00000559850 H7C1W4 665 aa18.9■□□□□ 0.62
RABGGTA-211ENST00000559850 BEND3Q5T5X7 828 aa18.9■□□□□ 0.62
RABGGTA-211ENST00000559850 SLC4A10Q6U841 1118 aa18.9■□□□□ 0.62
RABGGTA-211ENST00000559850 LINS1Q8NG48 757 aa18.9■□□□□ 0.62
RABGGTA-211ENST00000559850 TMX4Q9H1E5 349 aaPredicted RBP18.9■□□□□ 0.62
RABGGTA-211ENST00000559850 WDR90Q96KV7 1748 aa18.9■□□□□ 0.62
RABGGTA-211ENST00000559850 DDNO94850 711 aaPredicted RBP18.89■□□□□ 0.61
RABGGTA-211ENST00000559850 CTSWP56202 376 aa18.89■□□□□ 0.61
RABGGTA-211ENST00000559850 MPNDQ8N594 471 aa18.89■□□□□ 0.61
RABGGTA-211ENST00000559850 LTBP1Q14766 1721 aa18.88■□□□□ 0.61
RABGGTA-211ENST00000559850 AOC3Q16853 763 aa18.88■□□□□ 0.61
RABGGTA-211ENST00000559850 CCDC152Q4G0S7 254 aa18.88■□□□□ 0.61
RABGGTA-211ENST00000559850 DPP8Q6V1X1 898 aaPredicted RBP18.88■□□□□ 0.61
RABGGTA-211ENST00000559850 CASP7P55210 303 aa18.87■□□□□ 0.61
RABGGTA-211ENST00000559850 RPS8P62241 208 aaKnown RBP18.87■□□□□ 0.61
RABGGTA-211ENST00000559850 GPSM2P81274 684 aa18.87■□□□□ 0.61
RABGGTA-211ENST00000559850 DPY19L2Q6NUT2 758 aa18.87■□□□□ 0.61
RABGGTA-211ENST00000559850 LARGE2Q8N3Y3 721 aa18.87■□□□□ 0.61
RABGGTA-211ENST00000559850 GREM2Q9H772 168 aa18.87■□□□□ 0.61
RABGGTA-211ENST00000559850 POTECB2RU33 542 aa18.86■□□□□ 0.61
RABGGTA-211ENST00000559850 PPIP5K2O43314 1243 aa18.86■□□□□ 0.61
RABGGTA-211ENST00000559850 HSP90B1P14625 803 aaKnown RBP18.86■□□□□ 0.61
RABGGTA-211ENST00000559850 TTLL11Q8NHH1 800 aa18.86■□□□□ 0.61
RABGGTA-211ENST00000559850 GPR101Q96P66 508 aaPredicted RBP18.86■□□□□ 0.61
RABGGTA-211ENST00000559850 SMC4Q9NTJ3 1288 aa18.86■□□□□ 0.61
RABGGTA-211ENST00000559850 GRIPAP1Q4V328 841 aa18.85■□□□□ 0.61
RABGGTA-211ENST00000559850 JDP2Q8WYK2 163 aa18.85■□□□□ 0.61
RABGGTA-211ENST00000559850 NSFL1CQ9UNZ2 370 aaKnown RBP18.85■□□□□ 0.61
RABGGTA-211ENST00000559850 FZD9O00144 591 aa18.84■□□□□ 0.61
RABGGTA-211ENST00000559850 TMC4Q7Z404 712 aa18.84■□□□□ 0.61
RABGGTA-211ENST00000559850 C16orf71Q8IYS4 520 aaPredicted RBP18.84■□□□□ 0.61
RABGGTA-211ENST00000559850 RTFDC1Q9BY42 306 aaPredicted RBP18.84■□□□□ 0.61
RABGGTA-211ENST00000559850 FAM161AQ3B820 660 aa18.83■□□□□ 0.6
RABGGTA-211ENST00000559850 ANKRD18AQ8IVF6 992 aa18.83■□□□□ 0.6
RABGGTA-211ENST00000559850 NIM1KQ8IY84 436 aa18.83■□□□□ 0.6
RABGGTA-211ENST00000559850 SRCIN1Q9C0H9 1055 aa18.83■□□□□ 0.6
RABGGTA-211ENST00000559850 SCN4AP35499 1836 aa18.82■□□□□ 0.6
RABGGTA-211ENST00000559850 GRM8O00222 908 aa18.82■□□□□ 0.6
RABGGTA-211ENST00000559850 RIMBP2O15034 1052 aa18.82■□□□□ 0.6
RABGGTA-211ENST00000559850 TOMM70O94826 608 aa18.82■□□□□ 0.6
RABGGTA-211ENST00000559850 VEGFAP15692 232 aaPredicted RBP18.82■□□□□ 0.6
RABGGTA-211ENST00000559850 ALDH1L2Q3SY69 923 aa18.82■□□□□ 0.6
RABGGTA-211ENST00000559850 EPHA10Q5JZY3 1008 aa18.82■□□□□ 0.6
RABGGTA-211ENST00000559850 SUPT20HQ8NEM7 779 aa18.82■□□□□ 0.6
RABGGTA-211ENST00000559850 POLLQ9UGP5 575 aa18.82■□□□□ 0.6
RABGGTA-211ENST00000559850 GJA3Q9Y6H8 435 aa18.82■□□□□ 0.6
RABGGTA-211ENST00000559850 PTPRCP08575 1304 aa18.81■□□□□ 0.6
RABGGTA-211ENST00000559850 C6orf229H3BNL8 230 aa18.81■□□□□ 0.6
RABGGTA-211ENST00000559850 FOXO4P98177 505 aa18.81■□□□□ 0.6
RABGGTA-211ENST00000559850 PLA2G12BQ9BX93 195 aa18.81■□□□□ 0.6
RABGGTA-211ENST00000559850 C9orf78Q9NZ63 289 aaPredicted RBP18.81■□□□□ 0.6
RABGGTA-211ENST00000559850 A0A1B0GUL6 1792 aa18.81■□□□□ 0.6
RABGGTA-211ENST00000559850 ALDH1L1O75891 902 aa18.8■□□□□ 0.6
RABGGTA-211ENST00000559850 EIF6P56537 245 aaKnown RBP18.8■□□□□ 0.6
RABGGTA-211ENST00000559850 TBC1D16Q8TBP0 767 aa18.8■□□□□ 0.6
RABGGTA-211ENST00000559850 CDC5LQ99459 802 aaKnown RBP18.8■□□□□ 0.6
RABGGTA-211ENST00000559850 NOB1Q9ULX3 412 aaKnown RBP18.8■□□□□ 0.6
RABGGTA-211ENST00000559850 CHMP3Q9Y3E7 222 aa18.8■□□□□ 0.6
RABGGTA-211ENST00000559850 RTL9Q8NET4 1388 aa18.8■□□□□ 0.6
RABGGTA-211ENST00000559850 WTIPA6NIX2 430 aaPredicted RBP18.79■□□□□ 0.6
RABGGTA-211ENST00000559850 CSF1RP07333 972 aa18.79■□□□□ 0.6
RABGGTA-211ENST00000559850 NBPF7P0C2Y1 421 aaPredicted RBP18.79■□□□□ 0.6
RABGGTA-211ENST00000559850 POTEIP0CG38 1075 aa18.79■□□□□ 0.6
RABGGTA-211ENST00000559850 POTEJP0CG39 1038 aa18.79■□□□□ 0.6
RABGGTA-211ENST00000559850 ITGA6P23229 1130 aa18.79■□□□□ 0.6
RABGGTA-211ENST00000559850 KIAA2012Q0VF49 1180 aa18.79■□□□□ 0.6
RABGGTA-211ENST00000559850 ANKIB1Q9P2G1 1089 aa18.79■□□□□ 0.6
RABGGTA-211ENST00000559850 UFL1O94874 794 aa18.78■□□□□ 0.6
RABGGTA-211ENST00000559850 CT47B1P0C2W7 299 aaPredicted RBP18.78■□□□□ 0.6
RABGGTA-211ENST00000559850 RARSP54136 660 aaKnown RBP18.78■□□□□ 0.6
RABGGTA-211ENST00000559850 DOK7Q18PE1 504 aa18.78■□□□□ 0.6
RABGGTA-211ENST00000559850 WASHC4Q2M389 1173 aa18.78■□□□□ 0.6
RABGGTA-211ENST00000559850 RBM46Q8TBY0 533 aaKnown RBP18.78■□□□□ 0.6
RABGGTA-211ENST00000559850 SUCLG2Q96I99 432 aa18.78■□□□□ 0.6
RABGGTA-211ENST00000559850 DBNDD1Q9H9R9 158 aa18.78■□□□□ 0.6
RABGGTA-211ENST00000559850 ZNRF3Q9ULT6 936 aa18.78■□□□□ 0.6
RABGGTA-211ENST00000559850 YDJCA8MPS7 323 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms