RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 PRPF40BQ6NWY9 871 aaKnown RBP12.61□□□□□ -0.39
CARMIL3-202ENST00000559694 SUCLG2Q96I99 432 aa12.61□□□□□ -0.39
CARMIL3-202ENST00000559694 U3KPZ7 1027 aaPredicted RBP12.61□□□□□ -0.39
CARMIL3-202ENST00000559694 FER1L4A9Z1Z3 1794 aa12.6□□□□□ -0.39
CARMIL3-202ENST00000559694 SPATA31A6Q5VVP1 1343 aa12.6□□□□□ -0.39
CARMIL3-202ENST00000559694 PDE1AP54750 535 aa12.6□□□□□ -0.39
CARMIL3-202ENST00000559694 NUCB1Q02818 461 aa12.6□□□□□ -0.39
CARMIL3-202ENST00000559694 CCAR1Q8IX12 1150 aaKnown RBP12.6□□□□□ -0.39
CARMIL3-202ENST00000559694 UPF3BQ9BZI7 483 aaKnown RBP12.6□□□□□ -0.39
CARMIL3-202ENST00000559694 ZNF771Q7L3S4 317 aaPredicted RBP12.6□□□□□ -0.39
CARMIL3-202ENST00000559694 FLAD1Q8NFF5 587 aa12.6□□□□□ -0.39
CARMIL3-202ENST00000559694 TCEAL9Q9UHQ7 104 aa12.6□□□□□ -0.39
CARMIL3-202ENST00000559694 JAG2Q9Y219 1238 aa12.6□□□□□ -0.39
CARMIL3-202ENST00000559694 ZNF521Q96K83 1311 aa12.6□□□□□ -0.39
CARMIL3-202ENST00000559694 NEURL1BA8MQ27 555 aa12.6□□□□□ -0.39
CARMIL3-202ENST00000559694 KCNQ2O43526 872 aa12.6□□□□□ -0.39
CARMIL3-202ENST00000559694 TNNT3P45378 269 aaPredicted RBP12.6□□□□□ -0.39
CARMIL3-202ENST00000559694 DLC1Q96QB1 1528 aa12.59□□□□□ -0.39
CARMIL3-202ENST00000559694 EYA2O00167 538 aa12.59□□□□□ -0.39
CARMIL3-202ENST00000559694 MPHOSPH10O00566 681 aaKnown RBP12.59□□□□□ -0.39
CARMIL3-202ENST00000559694 SPTY2D1Q68D10 685 aaPredicted RBP12.59□□□□□ -0.39
CARMIL3-202ENST00000559694 RBM17Q96I25 401 aaKnown RBP12.59□□□□□ -0.39
CARMIL3-202ENST00000559694 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.59□□□□□ -0.39
CARMIL3-202ENST00000559694 CCDC69A6NI79 296 aa12.59□□□□□ -0.39
CARMIL3-202ENST00000559694 H0YIN7 160 aa12.59□□□□□ -0.39
CARMIL3-202ENST00000559694 XBP1P17861 261 aa12.59□□□□□ -0.39
CARMIL3-202ENST00000559694 JDP2Q8WYK2 163 aa12.59□□□□□ -0.39
CARMIL3-202ENST00000559694 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.59□□□□□ -0.39
CARMIL3-202ENST00000559694 IL6STP40189 918 aaPredicted RBP12.59□□□□□ -0.39
CARMIL3-202ENST00000559694 ERBB4Q15303 1308 aa12.59□□□□□ -0.39
CARMIL3-202ENST00000559694 BAG3O95817 575 aa12.58□□□□□ -0.39
CARMIL3-202ENST00000559694 MCM2P49736 904 aa12.58□□□□□ -0.39
CARMIL3-202ENST00000559694 KRT32Q14532 448 aa12.58□□□□□ -0.39
CARMIL3-202ENST00000559694 OGFOD1Q8N543 542 aa12.58□□□□□ -0.39
CARMIL3-202ENST00000559694 TBC1D2Q9BYX2 928 aa12.58□□□□□ -0.39
CARMIL3-202ENST00000559694 TECPR2O15040 1411 aa12.58□□□□□ -0.39
CARMIL3-202ENST00000559694 SLC4A8Q2Y0W8 1093 aa12.58□□□□□ -0.4
CARMIL3-202ENST00000559694 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.58□□□□□ -0.4
CARMIL3-202ENST00000559694 ANKRD2Q9GZV1 360 aa12.58□□□□□ -0.4
CARMIL3-202ENST00000559694 USP44Q9H0E7 712 aa12.58□□□□□ -0.4
CARMIL3-202ENST00000559694 IFT172Q9UG01 1749 aa12.58□□□□□ -0.4
CARMIL3-202ENST00000559694 RANBP6O60518 1105 aaKnown RBP12.58□□□□□ -0.4
CARMIL3-202ENST00000559694 CYP7A1P22680 504 aa12.58□□□□□ -0.4
CARMIL3-202ENST00000559694 NLGN1Q8N2Q7 840 aa12.58□□□□□ -0.4
CARMIL3-202ENST00000559694 CCDC39Q9UFE4 941 aa12.58□□□□□ -0.4
CARMIL3-202ENST00000559694 REREQ9P2R6 1566 aa12.57□□□□□ -0.4
CARMIL3-202ENST00000559694 ZNF213O14771 459 aa12.57□□□□□ -0.4
CARMIL3-202ENST00000559694 TAF5LO75529 589 aa12.57□□□□□ -0.4
CARMIL3-202ENST00000559694 BMP2KLQ5H9B9 411 aa12.57□□□□□ -0.4
CARMIL3-202ENST00000559694 ZNF804AQ7Z570 1209 aa12.57□□□□□ -0.4
CARMIL3-202ENST00000559694 PNMA6EA0A0J9YXQ4 647 aa12.57□□□□□ -0.4
CARMIL3-202ENST00000559694 TTC22Q5TAA0 569 aa12.57□□□□□ -0.4
CARMIL3-202ENST00000559694 SLC9C2Q5TAH2 1124 aa12.57□□□□□ -0.4
CARMIL3-202ENST00000559694 PDRG1Q9NUG6 133 aa12.57□□□□□ -0.4
CARMIL3-202ENST00000559694 TMEM131LA2VDJ0 1609 aa12.57□□□□□ -0.4
CARMIL3-202ENST00000559694 SDSP20132 328 aa12.57□□□□□ -0.4
CARMIL3-202ENST00000559694 CASTP20810 708 aaKnown RBP12.57□□□□□ -0.4
CARMIL3-202ENST00000559694 CREBRFQ8IUR6 639 aa12.57□□□□□ -0.4
CARMIL3-202ENST00000559694 ZNF287Q9HBT7 754 aa12.57□□□□□ -0.4
CARMIL3-202ENST00000559694 MAP3K15Q6ZN16 1313 aa12.57□□□□□ -0.4
CARMIL3-202ENST00000559694 PALLDQ8WX93 1383 aa12.57□□□□□ -0.4
CARMIL3-202ENST00000559694 PRPF40AO75400 957 aaKnown RBP12.56□□□□□ -0.4
CARMIL3-202ENST00000559694 UFL1O94874 794 aa12.56□□□□□ -0.4
CARMIL3-202ENST00000559694 TTLL12Q14166 644 aaPredicted RBP12.56□□□□□ -0.4
CARMIL3-202ENST00000559694 ANKRD1Q15327 319 aa12.56□□□□□ -0.4
CARMIL3-202ENST00000559694 ZNF444Q8N0Y2 327 aaPredicted RBP12.56□□□□□ -0.4
CARMIL3-202ENST00000559694 ATG3Q9NT62 314 aa12.56□□□□□ -0.4
CARMIL3-202ENST00000559694 PODXL2Q9NZ53 605 aa12.56□□□□□ -0.4
CARMIL3-202ENST00000559694 ZNF853P0CG23 659 aa12.56□□□□□ -0.4
CARMIL3-202ENST00000559694 HAND2P61296 217 aa12.56□□□□□ -0.4
CARMIL3-202ENST00000559694 VPS72Q15906 364 aa12.56□□□□□ -0.4
CARMIL3-202ENST00000559694 GIGYF2Q6Y7W6 1299 aaKnown RBP12.56□□□□□ -0.4
CARMIL3-202ENST00000559694 ZSCAN30Q86W11 494 aa12.56□□□□□ -0.4
CARMIL3-202ENST00000559694 TRMT2AQ8IZ69 625 aaKnown RBP12.56□□□□□ -0.4
CARMIL3-202ENST00000559694 PIBF1Q8WXW3 757 aa12.56□□□□□ -0.4
CARMIL3-202ENST00000559694 BRMS1Q9HCU9 246 aa12.56□□□□□ -0.4
CARMIL3-202ENST00000559694 RBM26Q5T8P6 1007 aaKnown RBP12.56□□□□□ -0.4
CARMIL3-202ENST00000559694 EYA3Q99504 573 aa12.56□□□□□ -0.4
CARMIL3-202ENST00000559694 A0A1B0GUL7 405 aa12.56□□□□□ -0.4
CARMIL3-202ENST00000559694 RPS8P62241 208 aaKnown RBP12.56□□□□□ -0.4
CARMIL3-202ENST00000559694 NAA16Q6N069 864 aaPredicted RBP12.56□□□□□ -0.4
CARMIL3-202ENST00000559694 TRIM22Q8IYM9 498 aa12.56□□□□□ -0.4
CARMIL3-202ENST00000559694 HEG1Q9ULI3 1381 aa12.56□□□□□ -0.4
CARMIL3-202ENST00000559694 CRB1P82279 1406 aa12.55□□□□□ -0.4
CARMIL3-202ENST00000559694 XRCC6P12956 609 aaKnown RBP eCLIP12.55□□□□□ -0.4
CARMIL3-202ENST00000559694 TBC1D9Q6ZT07 1266 aa12.55□□□□□ -0.4
CARMIL3-202ENST00000559694 DIP2AQ14689 1571 aa12.55□□□□□ -0.4
CARMIL3-202ENST00000559694 BEND3Q5T5X7 828 aa12.55□□□□□ -0.4
CARMIL3-202ENST00000559694 SMC5Q8IY18 1101 aa12.55□□□□□ -0.4
CARMIL3-202ENST00000559694 UQCRHLA0A096LP55 91 aa12.54□□□□□ -0.4
CARMIL3-202ENST00000559694 UQCRHP07919 91 aa12.54□□□□□ -0.4
CARMIL3-202ENST00000559694 CLCN1P35523 988 aa12.54□□□□□ -0.4
CARMIL3-202ENST00000559694 BICD2Q8TD16 824 aa12.54□□□□□ -0.4
CARMIL3-202ENST00000559694 PANK2Q9BZ23 570 aa12.54□□□□□ -0.4
CARMIL3-202ENST00000559694 ZGPATQ8N5A5 531 aaKnown RBP12.54□□□□□ -0.4
CARMIL3-202ENST00000559694 DBNDD2Q9BQY9 259 aa12.54□□□□□ -0.4
CARMIL3-202ENST00000559694 PDCP20941 246 aa12.54□□□□□ -0.4
CARMIL3-202ENST00000559694 ZBTB38Q8NAP3 1195 aaPredicted RBP12.54□□□□□ -0.4
CARMIL3-202ENST00000559694 PAG1Q9NWQ8 432 aa12.54□□□□□ -0.4
CARMIL3-202ENST00000559694 SRP68Q9UHB9 627 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms