RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 SASH1O94885 1247 aa21.45■■□□□ 1.02
CHRNA3-206ENST00000559658 CSF1RP07333 972 aa21.45■■□□□ 1.02
CHRNA3-206ENST00000559658 TSHZ3Q63HK5 1081 aa21.45■■□□□ 1.02
CHRNA3-206ENST00000559658 RGL2O15211 777 aa21.45■■□□□ 1.02
CHRNA3-206ENST00000559658 OS9Q13438 667 aaPredicted RBP21.45■■□□□ 1.02
CHRNA3-206ENST00000559658 PLEKHM2Q8IWE5 1019 aa21.45■■□□□ 1.02
CHRNA3-206ENST00000559658 SETDB2Q96T68 719 aa21.45■■□□□ 1.02
CHRNA3-206ENST00000559658 COPRSQ9NQ92 184 aa21.45■■□□□ 1.02
CHRNA3-206ENST00000559658 PDE8AO60658 829 aa21.44■■□□□ 1.02
CHRNA3-206ENST00000559658 SALL3Q9BXA9 1300 aa21.44■■□□□ 1.02
CHRNA3-206ENST00000559658 PUS3Q9BZE2 481 aaKnown RBP21.43■■□□□ 1.02
CHRNA3-206ENST00000559658 LRP5O75197 1615 aa21.43■■□□□ 1.02
CHRNA3-206ENST00000559658 LRRC24Q50LG9 513 aa21.43■■□□□ 1.02
CHRNA3-206ENST00000559658 RAB11FIP3O75154 756 aa21.42■■□□□ 1.02
CHRNA3-206ENST00000559658 NBPF5PQ86XG9 351 aaPredicted RBP21.42■■□□□ 1.02
CHRNA3-206ENST00000559658 KIF1BPQ96EK5 621 aa21.42■■□□□ 1.02
CHRNA3-206ENST00000559658 CARMIL3Q8ND23 1372 aa21.41■■□□□ 1.02
CHRNA3-206ENST00000559658 MSH5O43196 834 aa21.41■■□□□ 1.02
CHRNA3-206ENST00000559658 ITGA6P23229 1130 aa21.41■■□□□ 1.02
CHRNA3-206ENST00000559658 BAG6P46379 1132 aa21.41■■□□□ 1.02
CHRNA3-206ENST00000559658 DDR1Q08345 913 aa21.41■■□□□ 1.02
CHRNA3-206ENST00000559658 SF3B2Q13435 895 aaKnown RBP21.41■■□□□ 1.02
CHRNA3-206ENST00000559658 ATG9AQ7Z3C6 839 aa21.41■■□□□ 1.02
CHRNA3-206ENST00000559658 TSHZ2Q9NRE2 1034 aa21.41■■□□□ 1.02
CHRNA3-206ENST00000559658 QSER1Q2KHR3 1735 aa21.41■■□□□ 1.02
CHRNA3-206ENST00000559658 G3BP1Q13283 466 aaKnown RBP eCLIP21.4■■□□□ 1.02
CHRNA3-206ENST00000559658 SEC31BQ9NQW1 1179 aa21.4■■□□□ 1.02
CHRNA3-206ENST00000559658 ZBTB47Q9UFB7 747 aaPredicted RBP21.4■■□□□ 1.02
CHRNA3-206ENST00000559658 GSPT1P15170 499 aaKnown RBP21.39■■□□□ 1.02
CHRNA3-206ENST00000559658 CCDC57Q2TAC2 916 aa21.39■■□□□ 1.02
CHRNA3-206ENST00000559658 C8orf34Q49A92 452 aa21.39■■□□□ 1.02
CHRNA3-206ENST00000559658 PDGFDQ9GZP0 370 aaPredicted RBP21.39■■□□□ 1.02
CHRNA3-206ENST00000559658 TFCP2Q12800 502 aa21.39■■□□□ 1.01
CHRNA3-206ENST00000559658 IFIT5Q13325 482 aaKnown RBP21.39■■□□□ 1.01
CHRNA3-206ENST00000559658 SLC15A2Q16348 729 aa21.39■■□□□ 1.01
CHRNA3-206ENST00000559658 RIC1Q4ADV7 1423 aa21.39■■□□□ 1.01
CHRNA3-206ENST00000559658 HSP90AB4PQ58FF6 505 aa21.39■■□□□ 1.01
CHRNA3-206ENST00000559658 TLR7Q9NYK1 1049 aaKnown RBP21.39■■□□□ 1.01
CHRNA3-206ENST00000559658 TM4SF1P30408 202 aa21.38■■□□□ 1.01
CHRNA3-206ENST00000559658 MSL1Q68DK7 614 aa21.38■■□□□ 1.01
CHRNA3-206ENST00000559658 EAF2Q96CJ1 260 aaPredicted RBP21.37■■□□□ 1.01
CHRNA3-206ENST00000559658 GTF2E1P29083 439 aaPredicted RBP21.37■■□□□ 1.01
CHRNA3-206ENST00000559658 PDE1AP54750 535 aa21.37■■□□□ 1.01
CHRNA3-206ENST00000559658 EYA2O00167 538 aa21.36■■□□□ 1.01
CHRNA3-206ENST00000559658 MX1P20591 662 aa21.36■■□□□ 1.01
CHRNA3-206ENST00000559658 PRR5LQ6MZQ0 368 aa21.36■■□□□ 1.01
CHRNA3-206ENST00000559658 ERC1Q8IUD2 1116 aa21.36■■□□□ 1.01
CHRNA3-206ENST00000559658 NYXQ9GZU5 481 aa21.36■■□□□ 1.01
CHRNA3-206ENST00000559658 POLRMTO00411 1230 aaKnown RBP21.35■■□□□ 1.01
CHRNA3-206ENST00000559658 AACSQ86V21 672 aa21.35■■□□□ 1.01
CHRNA3-206ENST00000559658 ANKRD31Q8N7Z5 1873 aa21.35■■□□□ 1.01
CHRNA3-206ENST00000559658 NRXN2Q9P2S2 1712 aa21.35■■□□□ 1.01
CHRNA3-206ENST00000559658 ANKRD18BA2A2Z9 1011 aa21.35■■□□□ 1.01
CHRNA3-206ENST00000559658 SLC10A5Q5PT55 438 aa21.35■■□□□ 1.01
CHRNA3-206ENST00000559658 TTC22Q5TAA0 569 aa21.35■■□□□ 1.01
CHRNA3-206ENST00000559658 TPTE2Q6XPS3 522 aa21.35■■□□□ 1.01
CHRNA3-206ENST00000559658 CNBD1Q8NA66 436 aa21.35■■□□□ 1.01
CHRNA3-206ENST00000559658 CCDC8Q9H0W5 538 aaPredicted RBP21.35■■□□□ 1.01
CHRNA3-206ENST00000559658 STK32BQ9NY57 414 aa21.35■■□□□ 1.01
CHRNA3-206ENST00000559658 A0A1B0GUL6 1792 aa21.34■■□□□ 1.01
CHRNA3-206ENST00000559658 TAF7LQ5H9L4 462 aa21.34■■□□□ 1.01
CHRNA3-206ENST00000559658 SERPINB2P05120 415 aa21.33■■□□□ 1.01
CHRNA3-206ENST00000559658 CCDC152Q4G0S7 254 aa21.33■■□□□ 1.01
CHRNA3-206ENST00000559658 SLC51AQ86UW1 340 aa21.33■■□□□ 1.01
CHRNA3-206ENST00000559658 CLASRPQ8N2M8 674 aaKnown RBP21.33■■□□□ 1.01
CHRNA3-206ENST00000559658 ZNF609O15014 1411 aa21.33■■□□□ 1
CHRNA3-206ENST00000559658 RTL9Q8NET4 1388 aa21.33■■□□□ 1
CHRNA3-206ENST00000559658 BACH2Q9BYV9 841 aa21.32■■□□□ 1
CHRNA3-206ENST00000559658 NPHP1O15259 732 aa21.32■■□□□ 1
CHRNA3-206ENST00000559658 CIAO1O76071 339 aa21.32■■□□□ 1
CHRNA3-206ENST00000559658 TNNI3KQ59H18 835 aa21.32■■□□□ 1
CHRNA3-206ENST00000559658 FPGT-TNNI3KV9GXZ4 949 aa21.32■■□□□ 1
CHRNA3-206ENST00000559658 HMGB2P26583 209 aaKnown RBP21.31■■□□□ 1
CHRNA3-206ENST00000559658 IL15P40933 162 aaPredicted RBP21.31■■□□□ 1
CHRNA3-206ENST00000559658 SF3B3Q15393 1217 aaKnown RBP21.31■■□□□ 1
CHRNA3-206ENST00000559658 BMP2KLQ5H9B9 411 aa21.31■■□□□ 1
CHRNA3-206ENST00000559658 LDHAL6AQ6ZMR3 332 aa21.31■■□□□ 1
CHRNA3-206ENST00000559658 OSBPL3Q9H4L5 887 aa21.31■■□□□ 1
CHRNA3-206ENST00000559658 RIPOR2Q9Y4F9 1068 aa21.31■■□□□ 1
CHRNA3-206ENST00000559658 FLAD1Q8NFF5 587 aa21.3■■□□□ 1
CHRNA3-206ENST00000559658 PI4K2BQ8TCG2 481 aa21.3■■□□□ 1
CHRNA3-206ENST00000559658 STAP2Q9UGK3 403 aa21.3■■□□□ 1
CHRNA3-206ENST00000559658 DBNLQ9UJU6 430 aaKnown RBP21.3■■□□□ 1
CHRNA3-206ENST00000559658 MMP10P09238 476 aa21.3■■□□□ 1
CHRNA3-206ENST00000559658 IFIT2P09913 472 aaKnown RBP21.29■■□□□ 1
CHRNA3-206ENST00000559658 CELF1Q92879 486 aaKnown RBP21.29■■□□□ 1
CHRNA3-206ENST00000559658 DBNDD2Q9BQY9 259 aa21.29■■□□□ 1
CHRNA3-206ENST00000559658 COL11A2P13942 1736 aaPredicted RBP21.29■■□□□ 1
CHRNA3-206ENST00000559658 SEC24BO95487 1268 aa21.28■■□□□ 1
CHRNA3-206ENST00000559658 VGLL2Q8N8G2 317 aa21.28■■□□□ 1
CHRNA3-206ENST00000559658 CNNM1Q9NRU3 951 aa21.28■■□□□ 1
CHRNA3-206ENST00000559658 MAP4K4O95819 1239 aaPredicted RBP21.28■■□□□ 1
CHRNA3-206ENST00000559658 TIMM10P62072 90 aa21.28■■□□□ 1
CHRNA3-206ENST00000559658 NLGN1Q8N2Q7 840 aa21.28■■□□□ 1
CHRNA3-206ENST00000559658 HELBQ8NG08 1087 aaPredicted RBP21.28■■□□□ 1
CHRNA3-206ENST00000559658 NLRP3Q96P20 1036 aa21.28■■□□□ 1
CHRNA3-206ENST00000559658 SNAP23O00161 211 aa21.27■■□□□ 1
CHRNA3-206ENST00000559658 HSP90B1P14625 803 aaKnown RBP21.27■■□□□ 1
CHRNA3-206ENST00000559658 SDSP20132 328 aa21.27■■□□□ 1
CHRNA3-206ENST00000559658 UPF1Q92900 1129 aaKnown RBP eCLIP21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms