RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 CCT4P50991 539 aaKnown RBP25.64■■□□□ 1.7
TSPAN3-207ENST00000559494 ZKSCAN2Q63HK3 967 aa25.64■■□□□ 1.7
TSPAN3-207ENST00000559494 TTLL11Q8NHH1 800 aa25.64■■□□□ 1.7
TSPAN3-207ENST00000559494 TAF1P21675 1872 aa25.64■■□□□ 1.7
TSPAN3-207ENST00000559494 NBPF7P0C2Y1 421 aaPredicted RBP25.63■■□□□ 1.69
TSPAN3-207ENST00000559494 CTSWP56202 376 aa25.63■■□□□ 1.69
TSPAN3-207ENST00000559494 OLFM4Q6UX06 510 aa25.63■■□□□ 1.69
TSPAN3-207ENST00000559494 CCDC85AQ96PX6 553 aaPredicted RBP25.63■■□□□ 1.69
TSPAN3-207ENST00000559494 USP44Q9H0E7 712 aa25.63■■□□□ 1.69
TSPAN3-207ENST00000559494 UTYO14607 1347 aa25.63■■□□□ 1.69
TSPAN3-207ENST00000559494 CCDC152Q4G0S7 254 aa25.63■■□□□ 1.69
TSPAN3-207ENST00000559494 INTS3Q68E01 1043 aaKnown RBP25.63■■□□□ 1.69
TSPAN3-207ENST00000559494 CLUAP1Q96AJ1 413 aa25.63■■□□□ 1.69
TSPAN3-207ENST00000559494 SEC31BQ9NQW1 1179 aa25.63■■□□□ 1.69
TSPAN3-207ENST00000559494 BBOX1O75936 387 aa25.62■■□□□ 1.69
TSPAN3-207ENST00000559494 FOXO4P98177 505 aa25.62■■□□□ 1.69
TSPAN3-207ENST00000559494 GRAPQ13588 217 aa25.62■■□□□ 1.69
TSPAN3-207ENST00000559494 SLC51AQ86UW1 340 aa25.62■■□□□ 1.69
TSPAN3-207ENST00000559494 GRAPLQ8TC17 118 aaPredicted RBP25.62■■□□□ 1.69
TSPAN3-207ENST00000559494 CSF1RP07333 972 aa25.61■■□□□ 1.69
TSPAN3-207ENST00000559494 EPHA10Q5JZY3 1008 aa25.61■■□□□ 1.69
TSPAN3-207ENST00000559494 CELF1Q92879 486 aaKnown RBP25.61■■□□□ 1.69
TSPAN3-207ENST00000559494 PPEF1O14829 653 aaPredicted RBP25.6■■□□□ 1.69
TSPAN3-207ENST00000559494 KAZALD1Q96I82 304 aa25.6■■□□□ 1.69
TSPAN3-207ENST00000559494 SUCLG2Q96I99 432 aa25.6■■□□□ 1.69
TSPAN3-207ENST00000559494 MYH3P11055 1940 aa25.6■■□□□ 1.69
TSPAN3-207ENST00000559494 GREM2Q9H772 168 aa25.59■■□□□ 1.69
TSPAN3-207ENST00000559494 COL4A1P02462 1669 aa25.58■■□□□ 1.69
TSPAN3-207ENST00000559494 NFKBIEO00221 500 aa25.58■■□□□ 1.69
TSPAN3-207ENST00000559494 RPS8P62241 208 aaKnown RBP25.58■■□□□ 1.69
TSPAN3-207ENST00000559494 SOGA3Q5TF21 947 aa25.58■■□□□ 1.69
TSPAN3-207ENST00000559494 CHD4Q14839 1912 aa25.58■■□□□ 1.68
TSPAN3-207ENST00000559494 RASSF7Q02833 373 aa25.57■■□□□ 1.68
TSPAN3-207ENST00000559494 CCDC93Q567U6 631 aa25.57■■□□□ 1.68
TSPAN3-207ENST00000559494 ATP6V0A2Q9Y487 856 aa25.57■■□□□ 1.68
TSPAN3-207ENST00000559494 RLBP1P12271 317 aa25.56■■□□□ 1.68
TSPAN3-207ENST00000559494 LMBR1LQ6UX01 489 aa25.56■■□□□ 1.68
TSPAN3-207ENST00000559494 SP8Q8IXZ3 490 aa25.56■■□□□ 1.68
TSPAN3-207ENST00000559494 TMEM57Q8N5G2 664 aa25.56■■□□□ 1.68
TSPAN3-207ENST00000559494 PRELPP51888 382 aa25.55■■□□□ 1.68
TSPAN3-207ENST00000559494 CC2D2BQ6DHV5 1058 aa25.55■■□□□ 1.68
TSPAN3-207ENST00000559494 DZIP1LQ8IYY4 767 aaKnown RBP25.55■■□□□ 1.68
TSPAN3-207ENST00000559494 RTL9Q8NET4 1388 aa25.55■■□□□ 1.68
TSPAN3-207ENST00000559494 FER1L6Q2WGJ9 1857 aa25.55■■□□□ 1.68
TSPAN3-207ENST00000559494 PLIN1O60240 522 aa25.54■■□□□ 1.68
TSPAN3-207ENST00000559494 FAM161AQ3B820 660 aa25.54■■□□□ 1.68
TSPAN3-207ENST00000559494 RTKN2Q8IZC4 609 aa25.54■■□□□ 1.68
TSPAN3-207ENST00000559494 MEIS3Q99687 375 aa25.53■■□□□ 1.68
TSPAN3-207ENST00000559494 SNED1Q8TER0 1413 aa25.53■■□□□ 1.68
TSPAN3-207ENST00000559494 SBF1O95248 1867 aa25.52■■□□□ 1.68
TSPAN3-207ENST00000559494 ITGA6P23229 1130 aa25.52■■□□□ 1.68
TSPAN3-207ENST00000559494 TMC4Q7Z404 712 aa25.52■■□□□ 1.68
TSPAN3-207ENST00000559494 ANKRD18AQ8IVF6 992 aa25.52■■□□□ 1.68
TSPAN3-207ENST00000559494 FTSJ3Q8IY81 847 aaKnown RBP25.52■■□□□ 1.68
TSPAN3-207ENST00000559494 CDC5LQ99459 802 aaKnown RBP25.52■■□□□ 1.68
TSPAN3-207ENST00000559494 BICC1Q9H694 974 aaKnown RBP25.52■■□□□ 1.68
TSPAN3-207ENST00000559494 LTBP3Q9NS15 1303 aa25.51■■□□□ 1.67
TSPAN3-207ENST00000559494 RABL6Q3YEC7 729 aaPredicted RBP25.51■■□□□ 1.67
TSPAN3-207ENST00000559494 ANKRD44Q8N8A2 993 aa25.51■■□□□ 1.67
TSPAN3-207ENST00000559494 PANK1Q8TE04 598 aa25.51■■□□□ 1.67
TSPAN3-207ENST00000559494 TAOK3Q9H2K8 898 aa25.51■■□□□ 1.67
TSPAN3-207ENST00000559494 UBTFL1P0CB47 393 aaPredicted RBP25.5■■□□□ 1.67
TSPAN3-207ENST00000559494 FKBP4Q02790 459 aaKnown RBP eCLIP25.5■■□□□ 1.67
TSPAN3-207ENST00000559494 C9orf131Q5VYM1 1079 aa25.5■■□□□ 1.67
TSPAN3-207ENST00000559494 TMX4Q9H1E5 349 aaPredicted RBP25.5■■□□□ 1.67
TSPAN3-207ENST00000559494 CHMP3Q9Y3E7 222 aa25.5■■□□□ 1.67
TSPAN3-207ENST00000559494 GRIPAP1Q4V328 841 aa25.49■■□□□ 1.67
TSPAN3-207ENST00000559494 CCDC88AQ3V6T2 1871 aa25.49■■□□□ 1.67
TSPAN3-207ENST00000559494 ANKRD18BA2A2Z9 1011 aa25.48■■□□□ 1.67
TSPAN3-207ENST00000559494 LMNB1P20700 586 aa25.48■■□□□ 1.67
TSPAN3-207ENST00000559494 IFIT5Q13325 482 aaKnown RBP25.48■■□□□ 1.67
TSPAN3-207ENST00000559494 PSMD1Q99460 953 aa25.48■■□□□ 1.67
TSPAN3-207ENST00000559494 GNAI3P08754 354 aa25.47■■□□□ 1.67
TSPAN3-207ENST00000559494 MPNDQ8N594 471 aa25.47■■□□□ 1.67
TSPAN3-207ENST00000559494 BSDC1Q9NW68 430 aaPredicted RBP25.47■■□□□ 1.67
TSPAN3-207ENST00000559494 RNF181Q9P0P0 153 aa25.47■■□□□ 1.67
TSPAN3-207ENST00000559494 MS4A1P11836 297 aa25.46■■□□□ 1.67
TSPAN3-207ENST00000559494 YY1P25490 414 aa25.46■■□□□ 1.67
TSPAN3-207ENST00000559494 CCDC57Q2TAC2 916 aa25.46■■□□□ 1.67
TSPAN3-207ENST00000559494 ZNF277Q9NRM2 450 aaPredicted RBP25.46■■□□□ 1.67
TSPAN3-207ENST00000559494 LRRFIP2Q9Y608 721 aaKnown RBP25.46■■□□□ 1.67
TSPAN3-207ENST00000559494 IGHMBP2P38935 993 aaKnown RBP25.45■■□□□ 1.66
TSPAN3-207ENST00000559494 GPSM2P81274 684 aa25.45■■□□□ 1.66
TSPAN3-207ENST00000559494 DPP8Q6V1X1 898 aaPredicted RBP25.45■■□□□ 1.66
TSPAN3-207ENST00000559494 ITPRIPQ8IWB1 547 aa25.45■■□□□ 1.66
TSPAN3-207ENST00000559494 ZNF594Q96JF6 807 aaPredicted RBP25.45■■□□□ 1.66
TSPAN3-207ENST00000559494 ZBTB7BO15156 539 aaPredicted RBP25.44■■□□□ 1.66
TSPAN3-207ENST00000559494 RTFDC1Q9BY42 306 aaPredicted RBP25.44■■□□□ 1.66
TSPAN3-207ENST00000559494 MINPP1Q9UNW1 487 aa25.44■■□□□ 1.66
TSPAN3-207ENST00000559494 NSFL1CQ9UNZ2 370 aaKnown RBP25.44■■□□□ 1.66
TSPAN3-207ENST00000559494 HDAC5Q9UQL6 1122 aa25.44■■□□□ 1.66
TSPAN3-207ENST00000559494 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.43■■□□□ 1.66
TSPAN3-207ENST00000559494 LRRC37AA6NMS7 1700 aa25.43■■□□□ 1.66
TSPAN3-207ENST00000559494 C20orf194Q5TEA3 1177 aa25.42■■□□□ 1.66
TSPAN3-207ENST00000559494 MPHOSPH8Q99549 860 aa25.42■■□□□ 1.66
TSPAN3-207ENST00000559494 IARSP41252 1262 aaKnown RBP25.41■■□□□ 1.66
TSPAN3-207ENST00000559494 PODXL2Q9NZ53 605 aa25.41■■□□□ 1.66
TSPAN3-207ENST00000559494 POLLQ9UGP5 575 aa25.41■■□□□ 1.66
TSPAN3-207ENST00000559494 SPEF2Q9C093 1822 aa25.41■■□□□ 1.66
TSPAN3-207ENST00000559494 GNAI2P04899 355 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms