RNA–Protein interactions for RNA: ENST00000559457.1

AC055874.1-202, humanhuman

TSL 3

Gene AC055874.1, Length 462 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055874.1-202ENST00000559457 DDX46Q7L014 1031 aaKnown RBP23.61■■□□□ 1.37
AC055874.1-202ENST00000559457 C21orf2O43822 256 aa23.6■■□□□ 1.37
AC055874.1-202ENST00000559457 NBPF7P0C2Y1 421 aaPredicted RBP23.6■■□□□ 1.37
AC055874.1-202ENST00000559457 CTSWP56202 376 aa23.6■■□□□ 1.37
AC055874.1-202ENST00000559457 COL4A1P02462 1669 aa23.6■■□□□ 1.37
AC055874.1-202ENST00000559457 CHD4Q14839 1912 aa23.59■■□□□ 1.37
AC055874.1-202ENST00000559457 CCDC152Q4G0S7 254 aa23.59■■□□□ 1.37
AC055874.1-202ENST00000559457 INTS3Q68E01 1043 aaKnown RBP23.59■■□□□ 1.37
AC055874.1-202ENST00000559457 ARHGAP27Q6ZUM4 889 aa23.59■■□□□ 1.37
AC055874.1-202ENST00000559457 PLA2G12BQ9BX93 195 aa23.59■■□□□ 1.37
AC055874.1-202ENST00000559457 USP44Q9H0E7 712 aa23.59■■□□□ 1.37
AC055874.1-202ENST00000559457 UTYO14607 1347 aa23.59■■□□□ 1.37
AC055874.1-202ENST00000559457 OLFM4Q6UX06 510 aa23.58■■□□□ 1.37
AC055874.1-202ENST00000559457 SLC51AQ86UW1 340 aa23.58■■□□□ 1.37
AC055874.1-202ENST00000559457 TTLL11Q8NHH1 800 aa23.58■■□□□ 1.37
AC055874.1-202ENST00000559457 SPEF2Q9C093 1822 aa23.57■■□□□ 1.36
AC055874.1-202ENST00000559457 PPEF1O14829 653 aaPredicted RBP23.57■■□□□ 1.36
AC055874.1-202ENST00000559457 FOXO4P98177 505 aa23.57■■□□□ 1.36
AC055874.1-202ENST00000559457 GRAPQ13588 217 aa23.57■■□□□ 1.36
AC055874.1-202ENST00000559457 GRAPLQ8TC17 118 aaPredicted RBP23.57■■□□□ 1.36
AC055874.1-202ENST00000559457 C7orf43Q8WVR3 580 aa23.57■■□□□ 1.36
AC055874.1-202ENST00000559457 SUCLG2Q96I99 432 aa23.57■■□□□ 1.36
AC055874.1-202ENST00000559457 SEC31BQ9NQW1 1179 aa23.57■■□□□ 1.36
AC055874.1-202ENST00000559457 FER1L6Q2WGJ9 1857 aa23.56■■□□□ 1.36
AC055874.1-202ENST00000559457 PLIN1O60240 522 aa23.56■■□□□ 1.36
AC055874.1-202ENST00000559457 RLBP1P12271 317 aa23.56■■□□□ 1.36
AC055874.1-202ENST00000559457 EPHA10Q5JZY3 1008 aa23.56■■□□□ 1.36
AC055874.1-202ENST00000559457 FTSJ3Q8IY81 847 aaKnown RBP23.56■■□□□ 1.36
AC055874.1-202ENST00000559457 DZIP1LQ8IYY4 767 aaKnown RBP23.56■■□□□ 1.36
AC055874.1-202ENST00000559457 TMEM57Q8N5G2 664 aa23.56■■□□□ 1.36
AC055874.1-202ENST00000559457 CELF1Q92879 486 aaKnown RBP23.56■■□□□ 1.36
AC055874.1-202ENST00000559457 GREM2Q9H772 168 aa23.56■■□□□ 1.36
AC055874.1-202ENST00000559457 CCDC88AQ3V6T2 1871 aa23.56■■□□□ 1.36
AC055874.1-202ENST00000559457 KAZALD1Q96I82 304 aa23.55■■□□□ 1.36
AC055874.1-202ENST00000559457 SBF1O95248 1867 aa23.54■■□□□ 1.36
AC055874.1-202ENST00000559457 BBOX1O75936 387 aa23.53■■□□□ 1.36
AC055874.1-202ENST00000559457 CSF1RP07333 972 aa23.53■■□□□ 1.36
AC055874.1-202ENST00000559457 FAM161AQ3B820 660 aa23.53■■□□□ 1.36
AC055874.1-202ENST00000559457 LMBR1LQ6UX01 489 aa23.53■■□□□ 1.36
AC055874.1-202ENST00000559457 MEIS3Q99687 375 aa23.53■■□□□ 1.36
AC055874.1-202ENST00000559457 CHMP3Q9Y3E7 222 aa23.53■■□□□ 1.36
AC055874.1-202ENST00000559457 RASSF7Q02833 373 aa23.52■■□□□ 1.36
AC055874.1-202ENST00000559457 CCDC93Q567U6 631 aa23.52■■□□□ 1.36
AC055874.1-202ENST00000559457 PANK1Q8TE04 598 aa23.52■■□□□ 1.36
AC055874.1-202ENST00000559457 RTL9Q8NET4 1388 aa23.52■■□□□ 1.36
AC055874.1-202ENST00000559457 UBTFL1P0CB47 393 aaPredicted RBP23.51■■□□□ 1.35
AC055874.1-202ENST00000559457 RPS8P62241 208 aaKnown RBP23.51■■□□□ 1.35
AC055874.1-202ENST00000559457 SOGA3Q5TF21 947 aa23.51■■□□□ 1.35
AC055874.1-202ENST00000559457 BICC1Q9H694 974 aaKnown RBP23.51■■□□□ 1.35
AC055874.1-202ENST00000559457 ATP6V0A2Q9Y487 856 aa23.51■■□□□ 1.35
AC055874.1-202ENST00000559457 NFKBIEO00221 500 aa23.5■■□□□ 1.35
AC055874.1-202ENST00000559457 ITGA6P23229 1130 aa23.5■■□□□ 1.35
AC055874.1-202ENST00000559457 ITPRIPQ8IWB1 547 aa23.5■■□□□ 1.35
AC055874.1-202ENST00000559457 UTRNP46939 3433 aa23.5■■□□□ 1.35
AC055874.1-202ENST00000559457 LRRC37AA6NMS7 1700 aa23.5■■□□□ 1.35
AC055874.1-202ENST00000559457 ANKRD18AQ8IVF6 992 aa23.49■■□□□ 1.35
AC055874.1-202ENST00000559457 ANKRD44Q8N8A2 993 aa23.49■■□□□ 1.35
AC055874.1-202ENST00000559457 CDC5LQ99459 802 aaKnown RBP23.49■■□□□ 1.35
AC055874.1-202ENST00000559457 SP8Q8IXZ3 490 aa23.48■■□□□ 1.35
AC055874.1-202ENST00000559457 SNED1Q8TER0 1413 aa23.48■■□□□ 1.35
AC055874.1-202ENST00000559457 ANKRD18BA2A2Z9 1011 aa23.47■■□□□ 1.35
AC055874.1-202ENST00000559457 GNAI3P08754 354 aa23.47■■□□□ 1.35
AC055874.1-202ENST00000559457 MS4A1P11836 297 aa23.47■■□□□ 1.35
AC055874.1-202ENST00000559457 IFIT5Q13325 482 aaKnown RBP23.47■■□□□ 1.35
AC055874.1-202ENST00000559457 CC2D2BQ6DHV5 1058 aa23.47■■□□□ 1.35
AC055874.1-202ENST00000559457 TMC4Q7Z404 712 aa23.47■■□□□ 1.35
AC055874.1-202ENST00000559457 RTKN2Q8IZC4 609 aa23.47■■□□□ 1.35
AC055874.1-202ENST00000559457 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.47■■□□□ 1.35
AC055874.1-202ENST00000559457 TMX4Q9H1E5 349 aaPredicted RBP23.47■■□□□ 1.35
AC055874.1-202ENST00000559457 LRRFIP2Q9Y608 721 aaKnown RBP23.47■■□□□ 1.35
AC055874.1-202ENST00000559457 PRELPP51888 382 aa23.46■■□□□ 1.35
AC055874.1-202ENST00000559457 RABL6Q3YEC7 729 aaPredicted RBP23.46■■□□□ 1.35
AC055874.1-202ENST00000559457 C20orf194Q5TEA3 1177 aa23.46■■□□□ 1.35
AC055874.1-202ENST00000559457 TAOK3Q9H2K8 898 aa23.46■■□□□ 1.35
AC055874.1-202ENST00000559457 CCDC57Q2TAC2 916 aa23.45■■□□□ 1.34
AC055874.1-202ENST00000559457 DICER1Q9UPY3 1922 aaKnown RBP23.45■■□□□ 1.34
AC055874.1-202ENST00000559457 IGHMBP2P38935 993 aaKnown RBP23.44■■□□□ 1.34
AC055874.1-202ENST00000559457 FKBP4Q02790 459 aaKnown RBP eCLIP23.44■■□□□ 1.34
AC055874.1-202ENST00000559457 ZNF594Q96JF6 807 aaPredicted RBP23.44■■□□□ 1.34
AC055874.1-202ENST00000559457 LTBP3Q9NS15 1303 aa23.43■■□□□ 1.34
AC055874.1-202ENST00000559457 C9orf131Q5VYM1 1079 aa23.43■■□□□ 1.34
AC055874.1-202ENST00000559457 ZNF277Q9NRM2 450 aaPredicted RBP23.43■■□□□ 1.34
AC055874.1-202ENST00000559457 HDAC5Q9UQL6 1122 aa23.43■■□□□ 1.34
AC055874.1-202ENST00000559457 COG6Q9Y2V7 657 aa23.43■■□□□ 1.34
AC055874.1-202ENST00000559457 GPSM2P81274 684 aa23.42■■□□□ 1.34
AC055874.1-202ENST00000559457 GRIPAP1Q4V328 841 aa23.42■■□□□ 1.34
AC055874.1-202ENST00000559457 TAF7LQ5H9L4 462 aa23.42■■□□□ 1.34
AC055874.1-202ENST00000559457 DPP8Q6V1X1 898 aaPredicted RBP23.42■■□□□ 1.34
AC055874.1-202ENST00000559457 MPNDQ8N594 471 aa23.42■■□□□ 1.34
AC055874.1-202ENST00000559457 MPHOSPH8Q99549 860 aa23.42■■□□□ 1.34
AC055874.1-202ENST00000559457 BSDC1Q9NW68 430 aaPredicted RBP23.42■■□□□ 1.34
AC055874.1-202ENST00000559457 RNF181Q9P0P0 153 aa23.42■■□□□ 1.34
AC055874.1-202ENST00000559457 LTBP1Q14766 1721 aa23.42■■□□□ 1.34
AC055874.1-202ENST00000559457 ZBTB7BO15156 539 aaPredicted RBP23.41■■□□□ 1.34
AC055874.1-202ENST00000559457 LMNB1P20700 586 aa23.41■■□□□ 1.34
AC055874.1-202ENST00000559457 RRP1P56182 461 aaKnown RBP23.41■■□□□ 1.34
AC055874.1-202ENST00000559457 MVPQ14764 893 aaKnown RBP23.41■■□□□ 1.34
AC055874.1-202ENST00000559457 PSMD1Q99460 953 aa23.41■■□□□ 1.34
AC055874.1-202ENST00000559457 NSFL1CQ9UNZ2 370 aaKnown RBP23.41■■□□□ 1.34
AC055874.1-202ENST00000559457 DUOX1Q9NRD9 1551 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms