RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 IRS4O14654 1257 aaPredicted RBP14.04□□□□□ -0.16
SPG11-216ENST00000559347 TOMM70O94826 608 aa14.04□□□□□ -0.16
SPG11-216ENST00000559347 IARSP41252 1262 aaKnown RBP14.04□□□□□ -0.16
SPG11-216ENST00000559347 GRAPQ13588 217 aa14.04□□□□□ -0.16
SPG11-216ENST00000559347 SF3B3Q15393 1217 aaKnown RBP14.04□□□□□ -0.16
SPG11-216ENST00000559347 GRIPAP1Q4V328 841 aa14.04□□□□□ -0.16
SPG11-216ENST00000559347 DDX46Q7L014 1031 aaKnown RBP14.04□□□□□ -0.16
SPG11-216ENST00000559347 GRAPLQ8TC17 118 aaPredicted RBP14.04□□□□□ -0.16
SPG11-216ENST00000559347 CWC25Q9NXE8 425 aaPredicted RBP14.04□□□□□ -0.16
SPG11-216ENST00000559347 ATP6V0A2Q9Y487 856 aa14.04□□□□□ -0.16
SPG11-216ENST00000559347 PCCAP05165 728 aaPredicted RBP14.03□□□□□ -0.16
SPG11-216ENST00000559347 IGKV5-2P06315 115 aa14.03□□□□□ -0.16
SPG11-216ENST00000559347 RRAGCQ9HB90 399 aa14.03□□□□□ -0.16
SPG11-216ENST00000559347 CDHR2Q9BYE9 1310 aa14.03□□□□□ -0.16
SPG11-216ENST00000559347 ZNF541Q9H0D2 1346 aa14.03□□□□□ -0.16
SPG11-216ENST00000559347 NEXNQ0ZGT2 675 aa14.02□□□□□ -0.17
SPG11-216ENST00000559347 FKBP5Q13451 457 aaPredicted RBP14.02□□□□□ -0.17
SPG11-216ENST00000559347 DPY19L2Q6NUT2 758 aa14.02□□□□□ -0.17
SPG11-216ENST00000559347 PSME4Q14997 1843 aa14.01□□□□□ -0.17
SPG11-216ENST00000559347 NEURL1BA8MQ27 555 aa14.01□□□□□ -0.17
SPG11-216ENST00000559347 BBOX1O75936 387 aa14.01□□□□□ -0.17
SPG11-216ENST00000559347 CWF19L2Q2TBE0 894 aaKnown RBP14.01□□□□□ -0.17
SPG11-216ENST00000559347 TMC4Q7Z404 712 aa14.01□□□□□ -0.17
SPG11-216ENST00000559347 C16orf71Q8IYS4 520 aaPredicted RBP14.01□□□□□ -0.17
SPG11-216ENST00000559347 RBM46Q8TBY0 533 aaKnown RBP14.01□□□□□ -0.17
SPG11-216ENST00000559347 POTECB2RU33 542 aa14□□□□□ -0.17
SPG11-216ENST00000559347 FZD9O00144 591 aa14□□□□□ -0.17
SPG11-216ENST00000559347 DDNO94850 711 aaPredicted RBP14□□□□□ -0.17
SPG11-216ENST00000559347 VEGFAP15692 232 aaPredicted RBP14□□□□□ -0.17
SPG11-216ENST00000559347 SP8Q8IXZ3 490 aa14□□□□□ -0.17
SPG11-216ENST00000559347 DNAAF4Q8WXU2 420 aa14□□□□□ -0.17
SPG11-216ENST00000559347 CELF1Q92879 486 aaKnown RBP14□□□□□ -0.17
SPG11-216ENST00000559347 E9PSI1 815 aa13.99□□□□□ -0.17
SPG11-216ENST00000559347 PDE8AO60658 829 aa13.99□□□□□ -0.17
SPG11-216ENST00000559347 HSP90B1P14625 803 aaKnown RBP13.99□□□□□ -0.17
SPG11-216ENST00000559347 HSPA6P17066 643 aa13.99□□□□□ -0.17
SPG11-216ENST00000559347 JARID2Q92833 1246 aaPredicted RBP13.99□□□□□ -0.17
SPG11-216ENST00000559347 L3MBTL3Q96JM7 780 aaPredicted RBP13.99□□□□□ -0.17
SPG11-216ENST00000559347 RTFDC1Q9BY42 306 aaPredicted RBP13.99□□□□□ -0.17
SPG11-216ENST00000559347 TMX4Q9H1E5 349 aaPredicted RBP13.99□□□□□ -0.17
SPG11-216ENST00000559347 DPP8Q6V1X1 898 aaPredicted RBP13.98□□□□□ -0.17
SPG11-216ENST00000559347 LARGE2Q8N3Y3 721 aa13.98□□□□□ -0.17
SPG11-216ENST00000559347 JDP2Q8WYK2 163 aa13.98□□□□□ -0.17
SPG11-216ENST00000559347 ZNF646O15015 1829 aaPredicted RBP13.98□□□□□ -0.17
SPG11-216ENST00000559347 SCN9AQ15858 1988 aa13.97□□□□□ -0.17
SPG11-216ENST00000559347 PPIP5K2O43314 1243 aa13.97□□□□□ -0.17
SPG11-216ENST00000559347 CTSWP56202 376 aa13.97□□□□□ -0.17
SPG11-216ENST00000559347 SLFN5Q08AF3 891 aa13.97□□□□□ -0.17
SPG11-216ENST00000559347 GCKRQ14397 625 aa13.97□□□□□ -0.17
SPG11-216ENST00000559347 AOC3Q16853 763 aa13.97□□□□□ -0.17
SPG11-216ENST00000559347 CCDC152Q4G0S7 254 aa13.97□□□□□ -0.17
SPG11-216ENST00000559347 MPNDQ8N594 471 aa13.97□□□□□ -0.17
SPG11-216ENST00000559347 SUPT20HQ8NEM7 779 aa13.97□□□□□ -0.17
SPG11-216ENST00000559347 LINS1Q8NG48 757 aa13.97□□□□□ -0.17
SPG11-216ENST00000559347 VPS33BQ9H267 617 aa13.97□□□□□ -0.17
SPG11-216ENST00000559347 SEC31BQ9NQW1 1179 aa13.97□□□□□ -0.17
SPG11-216ENST00000559347 RTL9Q8NET4 1388 aa13.96□□□□□ -0.17
SPG11-216ENST00000559347 F6X3S4 739 aa13.96□□□□□ -0.17
SPG11-216ENST00000559347 FSTL1Q12841 308 aa13.96□□□□□ -0.17
SPG11-216ENST00000559347 DIEXFQ68CQ4 756 aaKnown RBP13.96□□□□□ -0.17
SPG11-216ENST00000559347 UBE3BQ7Z3V4 1068 aa13.96□□□□□ -0.17
SPG11-216ENST00000559347 GPC2Q8N158 579 aa13.96□□□□□ -0.17
SPG11-216ENST00000559347 SMC1BQ8NDV3 1235 aa13.96□□□□□ -0.17
SPG11-216ENST00000559347 IQCA1LA6NCM1 817 aa13.95□□□□□ -0.18
SPG11-216ENST00000559347 H7C1W4 665 aa13.95□□□□□ -0.18
SPG11-216ENST00000559347 CASP7P55210 303 aa13.95□□□□□ -0.18
SPG11-216ENST00000559347 RPS8P62241 208 aaKnown RBP13.95□□□□□ -0.18
SPG11-216ENST00000559347 KIAA2012Q0VF49 1180 aa13.95□□□□□ -0.18
SPG11-216ENST00000559347 NIM1KQ8IY84 436 aa13.95□□□□□ -0.18
SPG11-216ENST00000559347 CDCA7LQ96GN5 454 aa13.95□□□□□ -0.18
SPG11-216ENST00000559347 CCDC85AQ96PX6 553 aaPredicted RBP13.95□□□□□ -0.18
SPG11-216ENST00000559347 EIF6P56537 245 aaKnown RBP13.94□□□□□ -0.18
SPG11-216ENST00000559347 BEND3Q5T5X7 828 aa13.94□□□□□ -0.18
SPG11-216ENST00000559347 TRMT2AQ8IZ69 625 aaKnown RBP13.94□□□□□ -0.18
SPG11-216ENST00000559347 TTLL11Q8NHH1 800 aa13.94□□□□□ -0.18
SPG11-216ENST00000559347 POTEIP0CG38 1075 aa13.93□□□□□ -0.18
SPG11-216ENST00000559347 POTEJP0CG39 1038 aa13.93□□□□□ -0.18
SPG11-216ENST00000559347 GPSM2P81274 684 aa13.93□□□□□ -0.18
SPG11-216ENST00000559347 MIER1Q8N108 512 aa13.93□□□□□ -0.18
SPG11-216ENST00000559347 PLA2G12BQ9BX93 195 aa13.93□□□□□ -0.18
SPG11-216ENST00000559347 TAF1DQ9H5J8 278 aaPredicted RBP13.93□□□□□ -0.18
SPG11-216ENST00000559347 GREM2Q9H772 168 aa13.93□□□□□ -0.18
SPG11-216ENST00000559347 NSFL1CQ9UNZ2 370 aaKnown RBP13.93□□□□□ -0.18
SPG11-216ENST00000559347 SCNN1DP51172 638 aa13.92□□□□□ -0.18
SPG11-216ENST00000559347 APLP1P51693 650 aa13.92□□□□□ -0.18
SPG11-216ENST00000559347 MRPL50Q8N5N7 158 aaKnown RBP13.92□□□□□ -0.18
SPG11-216ENST00000559347 CDC5LQ99459 802 aaKnown RBP13.92□□□□□ -0.18
SPG11-216ENST00000559347 PODXL2Q9NZ53 605 aa13.92□□□□□ -0.18
SPG11-216ENST00000559347 POLLQ9UGP5 575 aa13.92□□□□□ -0.18
SPG11-216ENST00000559347 HACL1Q9UJ83 578 aa13.92□□□□□ -0.18
SPG11-216ENST00000559347 GJA3Q9Y6H8 435 aa13.92□□□□□ -0.18
SPG11-216ENST00000559347 FAM161AQ3B820 660 aa13.91□□□□□ -0.18
SPG11-216ENST00000559347 ANKRD18AQ8IVF6 992 aa13.91□□□□□ -0.18
SPG11-216ENST00000559347 TBC1D16Q8TBP0 767 aa13.91□□□□□ -0.18
SPG11-216ENST00000559347 SSH1Q8WYL5 1049 aa13.91□□□□□ -0.18
SPG11-216ENST00000559347 RNF39Q9H2S5 420 aa13.91□□□□□ -0.18
SPG11-216ENST00000559347 ZNRF3Q9ULT6 936 aa13.91□□□□□ -0.18
SPG11-216ENST00000559347 TRPM7Q96QT4 1865 aa13.91□□□□□ -0.18
SPG11-216ENST00000559347 PTPRCP08575 1304 aa13.9□□□□□ -0.18
SPG11-216ENST00000559347 PCNTO95613 3336 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms