RNA–Protein interactions for RNA: ENST00000559343.1

RORA-210, Transcript of RAR related orphan receptor A, humanhuman

TSL 4

Gene RORA, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-210ENST00000559343 CCDC24Q8N4L8 307 aa16■□□□□ 0.15
RORA-210ENST00000559343 RPGRQ92834 1020 aaKnown RBP16■□□□□ 0.15
RORA-210ENST00000559343 RBM17Q96I25 401 aaKnown RBP16■□□□□ 0.15
RORA-210ENST00000559343 CCDC136Q96JN2 1154 aa16■□□□□ 0.15
RORA-210ENST00000559343 C9orf78Q9NZ63 289 aaPredicted RBP16■□□□□ 0.15
RORA-210ENST00000559343 CCDC152Q4G0S7 254 aa15.99■□□□□ 0.15
RORA-210ENST00000559343 GRIPAP1Q4V328 841 aa15.99■□□□□ 0.15
RORA-210ENST00000559343 SOGA3Q5TF21 947 aa15.99■□□□□ 0.15
RORA-210ENST00000559343 UBE3BQ7Z3V4 1068 aa15.99■□□□□ 0.15
RORA-210ENST00000559343 TMC4Q7Z404 712 aa15.99■□□□□ 0.15
RORA-210ENST00000559343 SYNE4Q8N205 404 aa15.99■□□□□ 0.15
RORA-210ENST00000559343 KIAA1551Q9HCM1 1747 aa15.99■□□□□ 0.15
RORA-210ENST00000559343 RTL9Q8NET4 1388 aa15.99■□□□□ 0.15
RORA-210ENST00000559343 CC2D2BQ6DHV5 1058 aa15.98■□□□□ 0.15
RORA-210ENST00000559343 USP44Q9H0E7 712 aa15.98■□□□□ 0.15
RORA-210ENST00000559343 BBOX1O75936 387 aa15.97■□□□□ 0.15
RORA-210ENST00000559343 CSF1RP07333 972 aa15.97■□□□□ 0.15
RORA-210ENST00000559343 CTSWP56202 376 aa15.97■□□□□ 0.15
RORA-210ENST00000559343 DDX46Q7L014 1031 aaKnown RBP15.97■□□□□ 0.15
RORA-210ENST00000559343 ZNF622Q969S3 477 aaKnown RBP eCLIP15.97■□□□□ 0.15
RORA-210ENST00000559343 ANKRD31Q8N7Z5 1873 aa15.97■□□□□ 0.15
RORA-210ENST00000559343 GNAI3P08754 354 aa15.96■□□□□ 0.15
RORA-210ENST00000559343 GPR162Q16538 588 aa15.96■□□□□ 0.15
RORA-210ENST00000559343 C3orf67Q6ZVT6 689 aa15.96■□□□□ 0.15
RORA-210ENST00000559343 TTLL11Q8NHH1 800 aa15.96■□□□□ 0.15
RORA-210ENST00000559343 GRAPQ13588 217 aa15.95■□□□□ 0.14
RORA-210ENST00000559343 RTL5Q5HYW3 569 aaPredicted RBP15.95■□□□□ 0.14
RORA-210ENST00000559343 B4GALNT3Q6L9W6 998 aa15.95■□□□□ 0.14
RORA-210ENST00000559343 PRPF40BQ6NWY9 871 aaKnown RBP15.95■□□□□ 0.14
RORA-210ENST00000559343 GRAPLQ8TC17 118 aaPredicted RBP15.95■□□□□ 0.14
RORA-210ENST00000559343 C7orf43Q8WVR3 580 aa15.95■□□□□ 0.14
RORA-210ENST00000559343 BCS1LQ9Y276 419 aa15.95■□□□□ 0.14
RORA-210ENST00000559343 NBPF7P0C2Y1 421 aaPredicted RBP15.94■□□□□ 0.14
RORA-210ENST00000559343 RABL6Q3YEC7 729 aaPredicted RBP15.94■□□□□ 0.14
RORA-210ENST00000559343 CDC5LQ99459 802 aaKnown RBP15.94■□□□□ 0.14
RORA-210ENST00000559343 PCDHB15Q9Y5E8 787 aa15.94■□□□□ 0.14
RORA-210ENST00000559343 DLEC1Q9Y238 1755 aa15.94■□□□□ 0.14
RORA-210ENST00000559343 TNRC6CQ9HCJ0 1690 aaKnown RBP15.93■□□□□ 0.14
RORA-210ENST00000559343 UBTFL1P0CB47 393 aaPredicted RBP15.93■□□□□ 0.14
RORA-210ENST00000559343 YBX3P16989 372 aaKnown RBP eCLIP15.93■□□□□ 0.14
RORA-210ENST00000559343 FOXO4P98177 505 aa15.93■□□□□ 0.14
RORA-210ENST00000559343 HDAC1Q13547 482 aaPredicted RBP15.93■□□□□ 0.14
RORA-210ENST00000559343 TMX4Q9H1E5 349 aaPredicted RBP15.93■□□□□ 0.14
RORA-210ENST00000559343 KDM2BQ8NHM5 1336 aa15.93■□□□□ 0.14
RORA-210ENST00000559343 LAMB2P55268 1798 aa15.92■□□□□ 0.14
RORA-210ENST00000559343 RPS8P62241 208 aaKnown RBP15.92■□□□□ 0.14
RORA-210ENST00000559343 CENPQQ7L2Z9 268 aaPredicted RBP15.92■□□□□ 0.14
RORA-210ENST00000559343 RPAP2Q8IXW5 612 aaPredicted RBP15.92■□□□□ 0.14
RORA-210ENST00000559343 RTKN2Q8IZC4 609 aa15.92■□□□□ 0.14
RORA-210ENST00000559343 JARID2Q92833 1246 aaPredicted RBP15.92■□□□□ 0.14
RORA-210ENST00000559343 SUCLG2Q96I99 432 aa15.92■□□□□ 0.14
RORA-210ENST00000559343 RWDD1Q9H446 243 aaPredicted RBP15.92■□□□□ 0.14
RORA-210ENST00000559343 ATP6V0A2Q9Y487 856 aa15.92■□□□□ 0.14
RORA-210ENST00000559343 LTBP3Q9NS15 1303 aa15.92■□□□□ 0.14
RORA-210ENST00000559343 BRCA1P38398 1863 aaKnown RBP15.91■□□□□ 0.14
RORA-210ENST00000559343 PPEF1O14829 653 aaPredicted RBP15.91■□□□□ 0.14
RORA-210ENST00000559343 CCDC93Q567U6 631 aa15.91■□□□□ 0.14
RORA-210ENST00000559343 SP8Q8IXZ3 490 aa15.91■□□□□ 0.14
RORA-210ENST00000559343 KAZALD1Q96I82 304 aa15.91■□□□□ 0.14
RORA-210ENST00000559343 COL11A2P13942 1736 aaPredicted RBP15.91■□□□□ 0.14
RORA-210ENST00000559343 DDX60Q8IY21 1712 aaKnown RBP15.91■□□□□ 0.14
RORA-210ENST00000559343 GNAI2P04899 355 aa15.9■□□□□ 0.14
RORA-210ENST00000559343 LMBR1LQ6UX01 489 aa15.9■□□□□ 0.14
RORA-210ENST00000559343 MEIS3Q99687 375 aa15.9■□□□□ 0.14
RORA-210ENST00000559343 GREM2Q9H772 168 aa15.9■□□□□ 0.14
RORA-210ENST00000559343 ANKRD18BA2A2Z9 1011 aa15.89■□□□□ 0.13
RORA-210ENST00000559343 ITGA6P23229 1130 aa15.89■□□□□ 0.13
RORA-210ENST00000559343 IFIT5Q13325 482 aaKnown RBP15.89■□□□□ 0.13
RORA-210ENST00000559343 MTX1Q13505 466 aa15.89■□□□□ 0.13
RORA-210ENST00000559343 ANKRD18AQ8IVF6 992 aa15.89■□□□□ 0.13
RORA-210ENST00000559343 PELP1Q8IZL8 1130 aaKnown RBP15.89■□□□□ 0.13
RORA-210ENST00000559343 VPS33BQ9H267 617 aa15.89■□□□□ 0.13
RORA-210ENST00000559343 BICC1Q9H694 974 aaKnown RBP15.89■□□□□ 0.13
RORA-210ENST00000559343 BSDC1Q9NW68 430 aaPredicted RBP15.89■□□□□ 0.13
RORA-210ENST00000559343 C21orf2O43822 256 aa15.88■□□□□ 0.13
RORA-210ENST00000559343 IGHMBP2P38935 993 aaKnown RBP15.88■□□□□ 0.13
RORA-210ENST00000559343 CCDC57Q2TAC2 916 aa15.88■□□□□ 0.13
RORA-210ENST00000559343 EPHA10Q5JZY3 1008 aa15.88■□□□□ 0.13
RORA-210ENST00000559343 ANKRD44Q8N8A2 993 aa15.88■□□□□ 0.13
RORA-210ENST00000559343 CELF1Q92879 486 aaKnown RBP15.88■□□□□ 0.13
RORA-210ENST00000559343 PSMD1Q99460 953 aa15.88■□□□□ 0.13
RORA-210ENST00000559343 SEC31BQ9NQW1 1179 aa15.88■□□□□ 0.13
RORA-210ENST00000559343 FBXO3Q9UK99 471 aa15.88■□□□□ 0.13
RORA-210ENST00000559343 SNED1Q8TER0 1413 aa15.87■□□□□ 0.13
RORA-210ENST00000559343 IGHDP01880 384 aa15.87■□□□□ 0.13
RORA-210ENST00000559343 FAM161AQ3B820 660 aa15.87■□□□□ 0.13
RORA-210ENST00000559343 ARFGEF1Q9Y6D6 1849 aa15.87■□□□□ 0.13
RORA-210ENST00000559343 FKBP4Q02790 459 aaKnown RBP eCLIP15.86■□□□□ 0.13
RORA-210ENST00000559343 ARHGAP27Q6ZUM4 889 aa15.86■□□□□ 0.13
RORA-210ENST00000559343 SUPT20HQ8NEM7 779 aa15.86■□□□□ 0.13
RORA-210ENST00000559343 RTFDC1Q9BY42 306 aaPredicted RBP15.86■□□□□ 0.13
RORA-210ENST00000559343 TAOK3Q9H2K8 898 aa15.86■□□□□ 0.13
RORA-210ENST00000559343 PODXL2Q9NZ53 605 aa15.86■□□□□ 0.13
RORA-210ENST00000559343 CEP85Q6P2H3 762 aa15.85■□□□□ 0.13
RORA-210ENST00000559343 SIRT2Q8IXJ6 389 aa15.85■□□□□ 0.13
RORA-210ENST00000559343 SMC5Q8IY18 1101 aa15.85■□□□□ 0.13
RORA-210ENST00000559343 MPHOSPH8Q99549 860 aa15.85■□□□□ 0.13
RORA-210ENST00000559343 LRRFIP2Q9Y608 721 aaKnown RBP15.85■□□□□ 0.13
RORA-210ENST00000559343 NFKBIEO00221 500 aa15.84■□□□□ 0.13
RORA-210ENST00000559343 HMMRO75330 724 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms