RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 CCDC191Q8NCU4 936 aa22.85■■□□□ 1.25
TPM1-218ENST00000559281 MYD88Q99836 296 aa22.85■■□□□ 1.25
TPM1-218ENST00000559281 RTFDC1Q9BY42 306 aaPredicted RBP22.85■■□□□ 1.25
TPM1-218ENST00000559281 GJA3Q9Y6H8 435 aa22.85■■□□□ 1.25
TPM1-218ENST00000559281 EPHX2P34913 555 aa22.84■■□□□ 1.25
TPM1-218ENST00000559281 EAPPQ56P03 285 aaPredicted RBP22.84■■□□□ 1.25
TPM1-218ENST00000559281 RTL5Q5HYW3 569 aaPredicted RBP22.84■■□□□ 1.25
TPM1-218ENST00000559281 LMOD1P29536 600 aaPredicted RBP22.83■■□□□ 1.25
TPM1-218ENST00000559281 AOC3Q16853 763 aa22.83■■□□□ 1.25
TPM1-218ENST00000559281 TWISTNBQ3B726 338 aaPredicted RBP22.83■■□□□ 1.25
TPM1-218ENST00000559281 METTL22Q9BUU2 404 aaPredicted RBP22.83■■□□□ 1.25
TPM1-218ENST00000559281 CLEC11AQ9Y240 323 aa22.83■■□□□ 1.25
TPM1-218ENST00000559281 POTEIP0CG38 1075 aa22.82■■□□□ 1.24
TPM1-218ENST00000559281 POTEJP0CG39 1038 aa22.82■■□□□ 1.24
TPM1-218ENST00000559281 WDR63Q8IWG1 891 aa22.82■■□□□ 1.24
TPM1-218ENST00000559281 CWC25Q9NXE8 425 aaPredicted RBP22.82■■□□□ 1.24
TPM1-218ENST00000559281 KSR2Q6VAB6 950 aa22.81■■□□□ 1.24
TPM1-218ENST00000559281 ZNRF3Q9ULT6 936 aa22.81■■□□□ 1.24
TPM1-218ENST00000559281 PCCAP05165 728 aaPredicted RBP22.8■■□□□ 1.24
TPM1-218ENST00000559281 NEXNQ0ZGT2 675 aa22.8■■□□□ 1.24
TPM1-218ENST00000559281 SLC51AQ86UW1 340 aa22.8■■□□□ 1.24
TPM1-218ENST00000559281 MAP3K2Q9Y2U5 619 aa22.8■■□□□ 1.24
TPM1-218ENST00000559281 SALL2Q9Y467 1007 aaPredicted RBP22.8■■□□□ 1.24
TPM1-218ENST00000559281 KIAA2012Q0VF49 1180 aa22.79■■□□□ 1.24
TPM1-218ENST00000559281 ANKRD36CQ5JPF3 1778 aa22.78■■□□□ 1.24
TPM1-218ENST00000559281 PI4KAP2A4QPH2 592 aa22.78■■□□□ 1.24
TPM1-218ENST00000559281 SLC4A2P04920 1241 aa22.78■■□□□ 1.24
TPM1-218ENST00000559281 RPS8P62241 208 aaKnown RBP22.78■■□□□ 1.24
TPM1-218ENST00000559281 PI4KAP1Q8N8J0 262 aa22.78■■□□□ 1.24
TPM1-218ENST00000559281 JMYQ8N9B5 988 aa22.78■■□□□ 1.24
TPM1-218ENST00000559281 CELF1Q92879 486 aaKnown RBP22.78■■□□□ 1.24
TPM1-218ENST00000559281 NSFL1CQ9UNZ2 370 aaKnown RBP22.78■■□□□ 1.24
TPM1-218ENST00000559281 PDE8AO60658 829 aa22.77■■□□□ 1.24
TPM1-218ENST00000559281 CCDC152Q4G0S7 254 aa22.77■■□□□ 1.24
TPM1-218ENST00000559281 FAM9BQ8IZU0 186 aa22.77■■□□□ 1.24
TPM1-218ENST00000559281 CREBZFQ9NS37 354 aa22.77■■□□□ 1.24
TPM1-218ENST00000559281 TNIP1Q15025 636 aa22.76■■□□□ 1.23
TPM1-218ENST00000559281 CXCL9Q07325 125 aa22.75■■□□□ 1.23
TPM1-218ENST00000559281 WASHC4Q2M389 1173 aa22.75■■□□□ 1.23
TPM1-218ENST00000559281 FANCIQ9NVI1 1328 aa22.75■■□□□ 1.23
TPM1-218ENST00000559281 SCN4AP35499 1836 aa22.75■■□□□ 1.23
TPM1-218ENST00000559281 C6orf229H3BNL8 230 aa22.74■■□□□ 1.23
TPM1-218ENST00000559281 SCNN1DP51172 638 aa22.74■■□□□ 1.23
TPM1-218ENST00000559281 CIAPIN1Q6FI81 312 aa22.74■■□□□ 1.23
TPM1-218ENST00000559281 USP50Q70EL3 339 aaPredicted RBP22.74■■□□□ 1.23
TPM1-218ENST00000559281 CNTROBQ8N137 903 aa22.74■■□□□ 1.23
TPM1-218ENST00000559281 EYA3Q99504 573 aa22.74■■□□□ 1.23
TPM1-218ENST00000559281 ITGBL1O95965 494 aaPredicted RBP22.73■■□□□ 1.23
TPM1-218ENST00000559281 EPS15P42566 896 aa22.73■■□□□ 1.23
TPM1-218ENST00000559281 PASKQ96RG2 1323 aa22.73■■□□□ 1.23
TPM1-218ENST00000559281 COL4A5P29400 1685 aa22.72■■□□□ 1.23
TPM1-218ENST00000559281 JARID2Q92833 1246 aaPredicted RBP22.72■■□□□ 1.23
TPM1-218ENST00000559281 MYH16Q9H6N6 1097 aa22.72■■□□□ 1.23
TPM1-218ENST00000559281 CDHR2Q9BYE9 1310 aa22.72■■□□□ 1.23
TPM1-218ENST00000559281 VAMP4O75379 141 aa22.71■■□□□ 1.23
TPM1-218ENST00000559281 IGKV5-2P06315 115 aa22.71■■□□□ 1.23
TPM1-218ENST00000559281 GPSM2P81274 684 aa22.71■■□□□ 1.23
TPM1-218ENST00000559281 FLIIQ13045 1269 aa22.71■■□□□ 1.23
TPM1-218ENST00000559281 MAP1SQ66K74 1059 aaPredicted RBP22.71■■□□□ 1.23
TPM1-218ENST00000559281 G2E3Q7L622 706 aa22.71■■□□□ 1.23
TPM1-218ENST00000559281 BCL2L13Q9BXK5 485 aa22.71■■□□□ 1.23
TPM1-218ENST00000559281 SEC31BQ9NQW1 1179 aa22.71■■□□□ 1.23
TPM1-218ENST00000559281 ADARB2Q9NS39 739 aaKnown RBP22.71■■□□□ 1.23
TPM1-218ENST00000559281 GPRC5DQ9NZD1 345 aa22.71■■□□□ 1.23
TPM1-218ENST00000559281 TMEM88BA6NKF7 163 aa22.7■■□□□ 1.22
TPM1-218ENST00000559281 RAD17O75943 681 aa22.7■■□□□ 1.22
TPM1-218ENST00000559281 EXOSC9Q06265 439 aaKnown RBP22.7■■□□□ 1.22
TPM1-218ENST00000559281 FKBP5Q13451 457 aaPredicted RBP22.7■■□□□ 1.22
TPM1-218ENST00000559281 NEURL1BA8MQ27 555 aa22.69■■□□□ 1.22
TPM1-218ENST00000559281 GMPSP49915 693 aaPredicted RBP22.69■■□□□ 1.22
TPM1-218ENST00000559281 ANKRD18AQ8IVF6 992 aa22.69■■□□□ 1.22
TPM1-218ENST00000559281 ZC3H12CQ9C0D7 883 aaKnown RBP22.69■■□□□ 1.22
TPM1-218ENST00000559281 PODXL2Q9NZ53 605 aa22.69■■□□□ 1.22
TPM1-218ENST00000559281 ANKIB1Q9P2G1 1089 aa22.69■■□□□ 1.22
TPM1-218ENST00000559281 POLLQ9UGP5 575 aa22.69■■□□□ 1.22
TPM1-218ENST00000559281 RIMBP2O15034 1052 aa22.68■■□□□ 1.22
TPM1-218ENST00000559281 CWF19L2Q2TBE0 894 aaKnown RBP22.68■■□□□ 1.22
TPM1-218ENST00000559281 TBC1D16Q8TBP0 767 aa22.68■■□□□ 1.22
TPM1-218ENST00000559281 CCDC85AQ96PX6 553 aaPredicted RBP22.68■■□□□ 1.22
TPM1-218ENST00000559281 CDC5LQ99459 802 aaKnown RBP22.68■■□□□ 1.22
TPM1-218ENST00000559281 G3V3G9 751 aa22.67■■□□□ 1.22
TPM1-218ENST00000559281 CTSWP56202 376 aa22.67■■□□□ 1.22
TPM1-218ENST00000559281 DCAF8Q5TAQ9 597 aa22.67■■□□□ 1.22
TPM1-218ENST00000559281 DNAAF4Q8WXU2 420 aa22.67■■□□□ 1.22
TPM1-218ENST00000559281 LAMB2P55268 1798 aa22.67■■□□□ 1.22
TPM1-218ENST00000559281 H7C1D1 291 aa22.66■■□□□ 1.22
TPM1-218ENST00000559281 H7C1W4 665 aa22.66■■□□□ 1.22
TPM1-218ENST00000559281 DBNDD1Q9H9R9 158 aa22.66■■□□□ 1.22
TPM1-218ENST00000559281 MKRN1Q9UHC7 482 aaKnown RBP22.66■■□□□ 1.22
TPM1-218ENST00000559281 GGA1Q9UJY5 639 aa22.66■■□□□ 1.22
TPM1-218ENST00000559281 DDX60Q8IY21 1712 aaKnown RBP22.65■■□□□ 1.22
TPM1-218ENST00000559281 YDJCA8MPS7 323 aa22.65■■□□□ 1.22
TPM1-218ENST00000559281 GCKRQ14397 625 aa22.65■■□□□ 1.22
TPM1-218ENST00000559281 LINS1Q8NG48 757 aa22.65■■□□□ 1.22
TPM1-218ENST00000559281 TTLL11Q8NHH1 800 aa22.65■■□□□ 1.22
TPM1-218ENST00000559281 UFL1O94874 794 aa22.64■■□□□ 1.21
TPM1-218ENST00000559281 UBE3BQ7Z3V4 1068 aa22.64■■□□□ 1.21
TPM1-218ENST00000559281 DPF2Q92785 391 aa22.64■■□□□ 1.21
TPM1-218ENST00000559281 SPINK5Q9NQ38 1064 aaPredicted RBP22.64■■□□□ 1.21
TPM1-218ENST00000559281 CNOT7Q9UIV1 285 aaKnown RBP22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms