RNA–Protein interactions for RNA: ENST00000558906.5

ATP8B4-208, Transcript of ATPase phospholipid transporting 8B4 (putative), human

TSL 1 (best)

Gene ATP8B4, Length 4,179 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP8B4-208	ENST00000558906	SMC5	Q8IY18	1101 aa		4.92	□□□□□ -1.62
ATP8B4-208	ENST00000558906	CAGE1	Q8TC20	777 aa		4.92	□□□□□ -1.62
ATP8B4-208	ENST00000558906	FBXW7	Q969H0	707 aa		4.92	□□□□□ -1.62
ATP8B4-208	ENST00000558906	PUS7	Q96PZ0	661 aa	Known RBP	4.92	□□□□□ -1.62
ATP8B4-208	ENST00000558906	ZSCAN12	O43309	604 aa		4.92	□□□□□ -1.62
ATP8B4-208	ENST00000558906	FBLN1	P23142	703 aa		4.92	□□□□□ -1.62
ATP8B4-208	ENST00000558906	SFPQ	P23246	707 aa	Known RBP eCLIP	4.92	□□□□□ -1.62
ATP8B4-208	ENST00000558906	CALR	P27797	417 aa	Known RBP	4.92	□□□□□ -1.62
ATP8B4-208	ENST00000558906	GSDMD	P57764	484 aa		4.92	□□□□□ -1.62
ATP8B4-208	ENST00000558906	LRSAM1	Q6UWE0	723 aa		4.92	□□□□□ -1.62
ATP8B4-208	ENST00000558906	TMCO3	Q6UWJ1	677 aa		4.92	□□□□□ -1.62
ATP8B4-208	ENST00000558906	TRIM22	Q8IYM9	498 aa		4.92	□□□□□ -1.62
ATP8B4-208	ENST00000558906	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	4.92	□□□□□ -1.62
ATP8B4-208	ENST00000558906	CALCOCO1	Q9P1Z2	691 aa		4.92	□□□□□ -1.62
ATP8B4-208	ENST00000558906	OFD1	O75665	1012 aa		4.91	□□□□□ -1.62
ATP8B4-208	ENST00000558906	RDX	P35241	583 aa	Known RBP	4.91	□□□□□ -1.62
ATP8B4-208	ENST00000558906	UBE2H	P62256	183 aa		4.91	□□□□□ -1.62
ATP8B4-208	ENST00000558906	IQCE	Q6IPM2	695 aa		4.91	□□□□□ -1.62
ATP8B4-208	ENST00000558906	SKAP1	Q86WV1	359 aa		4.91	□□□□□ -1.62
ATP8B4-208	ENST00000558906	ANKLE2	Q86XL3	938 aa		4.91	□□□□□ -1.62
ATP8B4-208	ENST00000558906	PARP14	Q460N5	1801 aa		4.91	□□□□□ -1.62
ATP8B4-208	ENST00000558906	NUTM2B	A6NNL0	878 aa	Predicted RBP	4.91	□□□□□ -1.62
ATP8B4-208	ENST00000558906	NUTM2E	B1AL46	878 aa	Predicted RBP	4.91	□□□□□ -1.62
ATP8B4-208	ENST00000558906	HMGB1	P09429	215 aa	Known RBP	4.91	□□□□□ -1.62
ATP8B4-208	ENST00000558906	AIMP1	Q12904	312 aa	Known RBP	4.91	□□□□□ -1.62
ATP8B4-208	ENST00000558906	CCDC158	Q5M9N0	1113 aa		4.91	□□□□□ -1.62
ATP8B4-208	ENST00000558906	ZSCAN25	Q6NSZ9	544 aa		4.91	□□□□□ -1.62
ATP8B4-208	ENST00000558906	NUTM2A	Q8IVF1	878 aa	Predicted RBP	4.91	□□□□□ -1.62
ATP8B4-208	ENST00000558906	MAGEC2	Q9UBF1	373 aa	Predicted RBP	4.91	□□□□□ -1.62
ATP8B4-208	ENST00000558906	ZKSCAN5	Q9Y2L8	839 aa		4.91	□□□□□ -1.62
ATP8B4-208	ENST00000558906	PAXBP1	Q9Y5B6	917 aa		4.91	□□□□□ -1.62
ATP8B4-208	ENST00000558906	KDR	P35968	1356 aa		4.91	□□□□□ -1.62
ATP8B4-208	ENST00000558906	LAMA3	Q16787	3333 aa		4.91	□□□□□ -1.62
ATP8B4-208	ENST00000558906	TUBB4A	P04350	444 aa		4.91	□□□□□ -1.62
ATP8B4-208	ENST00000558906	CAST	P20810	708 aa	Known RBP	4.91	□□□□□ -1.62
ATP8B4-208	ENST00000558906	FOSB	P53539	338 aa		4.91	□□□□□ -1.62
ATP8B4-208	ENST00000558906	STIM1	Q13586	685 aa		4.91	□□□□□ -1.62
ATP8B4-208	ENST00000558906	PCDHB15	Q9Y5E8	787 aa		4.91	□□□□□ -1.62
ATP8B4-208	ENST00000558906	PHIP	Q8WWQ0	1821 aa		4.91	□□□□□ -1.62
ATP8B4-208	ENST00000558906	DDX60L	Q5H9U9	1706 aa	Known RBP	4.9	□□□□□ -1.62
ATP8B4-208	ENST00000558906	ADCY9	O60503	1353 aa		4.9	□□□□□ -1.62
ATP8B4-208	ENST00000558906	DISP3	Q9P2K9	1392 aa		4.9	□□□□□ -1.62
ATP8B4-208	ENST00000558906	TERF1	P54274	439 aa		4.9	□□□□□ -1.62
ATP8B4-208	ENST00000558906	NAP1L1	P55209	391 aa	Known RBP	4.9	□□□□□ -1.62
ATP8B4-208	ENST00000558906	TTC22	Q5TAA0	569 aa		4.9	□□□□□ -1.62
ATP8B4-208	ENST00000558906	CWC27	Q6UX04	472 aa	Known RBP	4.9	□□□□□ -1.62
ATP8B4-208	ENST00000558906	WASF1	Q92558	559 aa		4.9	□□□□□ -1.62
ATP8B4-208	ENST00000558906	EXOC6B	Q9Y2D4	811 aa		4.9	□□□□□ -1.62
ATP8B4-208	ENST00000558906	ANKRD36B	Q8N2N9	1353 aa		4.9	□□□□□ -1.62
ATP8B4-208	ENST00000558906	KIAA0232	Q92628	1395 aa		4.9	□□□□□ -1.62
ATP8B4-208	ENST00000558906	NPC1L1	Q9UHC9	1359 aa		4.9	□□□□□ -1.62
ATP8B4-208	ENST00000558906	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	4.9	□□□□□ -1.62
ATP8B4-208	ENST00000558906	RAB3GAP1	Q15042	981 aa		4.9	□□□□□ -1.62
ATP8B4-208	ENST00000558906	ZSCAN23	Q3MJ62	389 aa		4.9	□□□□□ -1.62
ATP8B4-208	ENST00000558906	AACS	Q86V21	672 aa		4.9	□□□□□ -1.62
ATP8B4-208	ENST00000558906	VPS37D	Q86XT2	251 aa		4.9	□□□□□ -1.62
ATP8B4-208	ENST00000558906	CCDC191	Q8NCU4	936 aa		4.9	□□□□□ -1.62
ATP8B4-208	ENST00000558906	DNAJC2	Q99543	621 aa	Known RBP	4.9	□□□□□ -1.62
ATP8B4-208	ENST00000558906	USP25	Q9UHP3	1055 aa		4.9	□□□□□ -1.62
ATP8B4-208	ENST00000558906	MAP3K5	Q99683	1374 aa		4.9	□□□□□ -1.63
ATP8B4-208	ENST00000558906	GOLGA6L9	A6NEM1	432 aa		4.9	□□□□□ -1.63
ATP8B4-208	ENST00000558906	FOXO3	O43524	673 aa		4.9	□□□□□ -1.63
ATP8B4-208	ENST00000558906	TNNT1	P13805	278 aa		4.9	□□□□□ -1.63
ATP8B4-208	ENST00000558906	MCM3	P25205	808 aa		4.9	□□□□□ -1.63
ATP8B4-208	ENST00000558906	CEBPZ	Q03701	1054 aa	Known RBP	4.9	□□□□□ -1.63
ATP8B4-208	ENST00000558906	AXDND1	Q5T1B0	1012 aa	Predicted RBP	4.9	□□□□□ -1.63
ATP8B4-208	ENST00000558906	NACAP1	Q9BZK3	213 aa		4.9	□□□□□ -1.63
ATP8B4-208	ENST00000558906	IL1RAPL2	Q9NP60	686 aa		4.9	□□□□□ -1.63
ATP8B4-208	ENST00000558906		U3KPZ7	1027 aa	Predicted RBP	4.9	□□□□□ -1.63
ATP8B4-208	ENST00000558906	STX6	O43752	255 aa		4.9	□□□□□ -1.63
ATP8B4-208	ENST00000558906	KIAA0754	O94854	1291 aa		4.9	□□□□□ -1.63
ATP8B4-208	ENST00000558906	ADCY5	O95622	1261 aa		4.9	□□□□□ -1.63
ATP8B4-208	ENST00000558906	RBM25	P49756	843 aa	Known RBP	4.9	□□□□□ -1.63
ATP8B4-208	ENST00000558906	MPND	Q8N594	471 aa		4.9	□□□□□ -1.63
ATP8B4-208	ENST00000558906	ABTB2	Q8N961	1025 aa		4.9	□□□□□ -1.63
ATP8B4-208	ENST00000558906	NOL7	Q9UMY1	257 aa	Known RBP	4.9	□□□□□ -1.63
ATP8B4-208	ENST00000558906	SLC3A2	P08195	630 aa	Known RBP	4.89	□□□□□ -1.63
ATP8B4-208	ENST00000558906	ESCO1	Q5FWF5	840 aa		4.89	□□□□□ -1.63
ATP8B4-208	ENST00000558906	CCDC83	Q8IWF9	413 aa		4.89	□□□□□ -1.63
ATP8B4-208	ENST00000558906	FAM107B	Q9H098	131 aa		4.89	□□□□□ -1.63
ATP8B4-208	ENST00000558906	CLIP2	Q9UDT6	1046 aa		4.89	□□□□□ -1.63
ATP8B4-208	ENST00000558906	AMOTL2	Q9Y2J4	779 aa		4.89	□□□□□ -1.63
ATP8B4-208	ENST00000558906	SPEF2	Q9C093	1822 aa		4.89	□□□□□ -1.63
ATP8B4-208	ENST00000558906	KAT6B	Q8WYB5	2073 aa		4.89	□□□□□ -1.63
ATP8B4-208	ENST00000558906	CCDC171	Q6TFL3	1326 aa		4.89	□□□□□ -1.63
ATP8B4-208	ENST00000558906	OTOF	Q9HC10	1997 aa		4.89	□□□□□ -1.63
ATP8B4-208	ENST00000558906	GOLGA6L10	A6NI86	522 aa		4.89	□□□□□ -1.63
ATP8B4-208	ENST00000558906	GNAT3	A8MTJ3	354 aa		4.89	□□□□□ -1.63
ATP8B4-208	ENST00000558906		G3V3G9	751 aa		4.89	□□□□□ -1.63
ATP8B4-208	ENST00000558906	POTEB2	H3BUK9	544 aa		4.89	□□□□□ -1.63
ATP8B4-208	ENST00000558906	ERLIN2	O94905	339 aa		4.89	□□□□□ -1.63
ATP8B4-208	ENST00000558906	EVA1C	P58658	441 aa		4.89	□□□□□ -1.63
ATP8B4-208	ENST00000558906	STK3	Q13188	491 aa		4.89	□□□□□ -1.63
ATP8B4-208	ENST00000558906	BMS1	Q14692	1282 aa	Known RBP	4.89	□□□□□ -1.63
ATP8B4-208	ENST00000558906	MAP9	Q49MG5	647 aa		4.89	□□□□□ -1.63
ATP8B4-208	ENST00000558906	DCAF8	Q5TAQ9	597 aa		4.89	□□□□□ -1.63
ATP8B4-208	ENST00000558906	VPS53	Q5VIR6	699 aa		4.89	□□□□□ -1.63
ATP8B4-208	ENST00000558906	HOMEZ	Q8IX15	550 aa		4.89	□□□□□ -1.63
ATP8B4-208	ENST00000558906	INTS4	Q96HW7	963 aa	Known RBP	4.89	□□□□□ -1.63
ATP8B4-208	ENST00000558906	NLRP2	Q9NX02	1062 aa		4.89	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms