RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 ELL2O00472 640 aaPredicted RBP7.22□□□□□ -1.25
SMAD3-209ENST00000558894 BBOX1O75936 387 aa7.22□□□□□ -1.25
SMAD3-209ENST00000558894 EPHX2P34913 555 aa7.22□□□□□ -1.25
SMAD3-209ENST00000558894 GNAI1P63096 354 aa7.22□□□□□ -1.25
SMAD3-209ENST00000558894 CCDC27Q2M243 656 aa7.22□□□□□ -1.25
SMAD3-209ENST00000558894 LDHDQ86WU2 507 aa7.22□□□□□ -1.25
SMAD3-209ENST00000558894 CELF1Q92879 486 aaKnown RBP7.22□□□□□ -1.25
SMAD3-209ENST00000558894 FAM89AQ96GI7 184 aa7.22□□□□□ -1.25
SMAD3-209ENST00000558894 HACL1Q9UJ83 578 aa7.22□□□□□ -1.25
SMAD3-209ENST00000558894 EPS15P42566 896 aa7.21□□□□□ -1.26
SMAD3-209ENST00000558894 KIAA2012Q0VF49 1180 aa7.21□□□□□ -1.26
SMAD3-209ENST00000558894 GRAPQ13588 217 aa7.21□□□□□ -1.26
SMAD3-209ENST00000558894 AOC3Q16853 763 aa7.21□□□□□ -1.26
SMAD3-209ENST00000558894 PPP4R3CPQ6ZMV5 832 aa7.21□□□□□ -1.26
SMAD3-209ENST00000558894 WWC1Q8IX03 1113 aa7.21□□□□□ -1.26
SMAD3-209ENST00000558894 GRAPLQ8TC17 118 aaPredicted RBP7.21□□□□□ -1.26
SMAD3-209ENST00000558894 VPS33BQ9H267 617 aa7.21□□□□□ -1.26
SMAD3-209ENST00000558894 CREBZFQ9NS37 354 aa7.21□□□□□ -1.26
SMAD3-209ENST00000558894 YDJCA8MPS7 323 aa7.2□□□□□ -1.26
SMAD3-209ENST00000558894 FMR1Q06787 632 aaKnown RBP eCLIP7.2□□□□□ -1.26
SMAD3-209ENST00000558894 CXCL9Q07325 125 aa7.2□□□□□ -1.26
SMAD3-209ENST00000558894 MAP1SQ66K74 1059 aaPredicted RBP7.2□□□□□ -1.26
SMAD3-209ENST00000558894 G2E3Q7L622 706 aa7.2□□□□□ -1.26
SMAD3-209ENST00000558894 LARGE2Q8N3Y3 721 aa7.2□□□□□ -1.26
SMAD3-209ENST00000558894 JDP2Q8WYK2 163 aa7.2□□□□□ -1.26
SMAD3-209ENST00000558894 TSR2Q969E8 191 aaKnown RBP7.2□□□□□ -1.26
SMAD3-209ENST00000558894 CNTNAP1P78357 1384 aa7.2□□□□□ -1.26
SMAD3-209ENST00000558894 IRS4O14654 1257 aaPredicted RBP7.19□□□□□ -1.26
SMAD3-209ENST00000558894 PPIP5K2O43314 1243 aa7.19□□□□□ -1.26
SMAD3-209ENST00000558894 IGKV5-2P06315 115 aa7.19□□□□□ -1.26
SMAD3-209ENST00000558894 HIRAP54198 1017 aaPredicted RBP7.19□□□□□ -1.26
SMAD3-209ENST00000558894 EIF6P56537 245 aaKnown RBP7.19□□□□□ -1.26
SMAD3-209ENST00000558894 GPSM2P81274 684 aa7.19□□□□□ -1.26
SMAD3-209ENST00000558894 CALD1Q05682 793 aaKnown RBP7.19□□□□□ -1.26
SMAD3-209ENST00000558894 EAPPQ56P03 285 aaPredicted RBP7.19□□□□□ -1.26
SMAD3-209ENST00000558894 RTL5Q5HYW3 569 aaPredicted RBP7.19□□□□□ -1.26
SMAD3-209ENST00000558894 DPP8Q6V1X1 898 aaPredicted RBP7.19□□□□□ -1.26
SMAD3-209ENST00000558894 DDX46Q7L014 1031 aaKnown RBP7.19□□□□□ -1.26
SMAD3-209ENST00000558894 PNMA8AQ86V59 439 aaPredicted RBP7.19□□□□□ -1.26
SMAD3-209ENST00000558894 CNTROBQ8N137 903 aa7.19□□□□□ -1.26
SMAD3-209ENST00000558894 MPNDQ8N594 471 aa7.19□□□□□ -1.26
SMAD3-209ENST00000558894 ZBTB38Q8NAP3 1195 aaPredicted RBP7.19□□□□□ -1.26
SMAD3-209ENST00000558894 JARID2Q92833 1246 aaPredicted RBP7.19□□□□□ -1.26
SMAD3-209ENST00000558894 MYD88Q99836 296 aa7.19□□□□□ -1.26
SMAD3-209ENST00000558894 METTL22Q9BUU2 404 aaPredicted RBP7.19□□□□□ -1.26
SMAD3-209ENST00000558894 SEC31BQ9NQW1 1179 aa7.19□□□□□ -1.26
SMAD3-209ENST00000558894 GPRC5DQ9NZD1 345 aa7.19□□□□□ -1.26
SMAD3-209ENST00000558894 POLLQ9UGP5 575 aa7.19□□□□□ -1.26
SMAD3-209ENST00000558894 PGAP2Q9UHJ9 254 aa7.19□□□□□ -1.26
SMAD3-209ENST00000558894 ZNRF3Q9ULT6 936 aa7.19□□□□□ -1.26
SMAD3-209ENST00000558894 GJA3Q9Y6H8 435 aa7.19□□□□□ -1.26
SMAD3-209ENST00000558894 SHTN1A0MZ66 631 aa7.18□□□□□ -1.26
SMAD3-209ENST00000558894 ZNF316A6NFI3 1004 aaPredicted RBP7.18□□□□□ -1.26
SMAD3-209ENST00000558894 RASSF10A6NK89 507 aa7.18□□□□□ -1.26
SMAD3-209ENST00000558894 PCCAP05165 728 aaPredicted RBP7.18□□□□□ -1.26
SMAD3-209ENST00000558894 FAM161AQ3B820 660 aa7.18□□□□□ -1.26
SMAD3-209ENST00000558894 CST9Q5W186 159 aa7.18□□□□□ -1.26
SMAD3-209ENST00000558894 KSR2Q6VAB6 950 aa7.18□□□□□ -1.26
SMAD3-209ENST00000558894 USP50Q70EL3 339 aaPredicted RBP7.18□□□□□ -1.26
SMAD3-209ENST00000558894 TMC4Q7Z404 712 aa7.18□□□□□ -1.26
SMAD3-209ENST00000558894 RIC3Q7Z5B4 369 aa7.18□□□□□ -1.26
SMAD3-209ENST00000558894 NIM1KQ8IY84 436 aa7.18□□□□□ -1.26
SMAD3-209ENST00000558894 CCDC191Q8NCU4 936 aa7.18□□□□□ -1.26
SMAD3-209ENST00000558894 SPINK5Q9NQ38 1064 aaPredicted RBP7.18□□□□□ -1.26
SMAD3-209ENST00000558894 KCNQ5Q9NR82 932 aa7.18□□□□□ -1.26
SMAD3-209ENST00000558894 MKRN1Q9UHC7 482 aaKnown RBP7.18□□□□□ -1.26
SMAD3-209ENST00000558894 IL16Q14005 1332 aa7.18□□□□□ -1.26
SMAD3-209ENST00000558894 CDHR2Q9BYE9 1310 aa7.18□□□□□ -1.26
SMAD3-209ENST00000558894 RTL9Q8NET4 1388 aa7.18□□□□□ -1.26
SMAD3-209ENST00000558894 PI4KAP2A4QPH2 592 aa7.17□□□□□ -1.26
SMAD3-209ENST00000558894 WTIPA6NIX2 430 aaPredicted RBP7.17□□□□□ -1.26
SMAD3-209ENST00000558894 TMEM88BA6NKF7 163 aa7.17□□□□□ -1.26
SMAD3-209ENST00000558894 TRAF5O00463 557 aa7.17□□□□□ -1.26
SMAD3-209ENST00000558894 TNRC18O15417 2968 aaPredicted RBP7.17□□□□□ -1.26
SMAD3-209ENST00000558894 HSPA1AP0DMV8 641 aaKnown RBP7.17□□□□□ -1.26
SMAD3-209ENST00000558894 HSPA1BP0DMV9 641 aaKnown RBP7.17□□□□□ -1.26
SMAD3-209ENST00000558894 VEGFBP49765 207 aa7.17□□□□□ -1.26
SMAD3-209ENST00000558894 GMPSP49915 693 aaPredicted RBP7.17□□□□□ -1.26
SMAD3-209ENST00000558894 RPS8P62241 208 aaKnown RBP7.17□□□□□ -1.26
SMAD3-209ENST00000558894 GOLGA2Q08379 1002 aa7.17□□□□□ -1.26
SMAD3-209ENST00000558894 TWISTNBQ3B726 338 aaPredicted RBP7.17□□□□□ -1.26
SMAD3-209ENST00000558894 CCDC30Q5VVM6 783 aa7.17□□□□□ -1.26
SMAD3-209ENST00000558894 PI4KAP1Q8N8J0 262 aa7.17□□□□□ -1.26
SMAD3-209ENST00000558894 SUPT20HQ8NEM7 779 aa7.17□□□□□ -1.26
SMAD3-209ENST00000558894 TBC1D16Q8TBP0 767 aa7.17□□□□□ -1.26
SMAD3-209ENST00000558894 GPR101Q96P66 508 aaPredicted RBP7.17□□□□□ -1.26
SMAD3-209ENST00000558894 PODXL2Q9NZ53 605 aa7.17□□□□□ -1.26
SMAD3-209ENST00000558894 CLEC11AQ9Y240 323 aa7.17□□□□□ -1.26
SMAD3-209ENST00000558894 MAP3K2Q9Y2U5 619 aa7.17□□□□□ -1.26
SMAD3-209ENST00000558894 A0A0C4DFX4 3053 aa7.17□□□□□ -1.26
SMAD3-209ENST00000558894 FANCIQ9NVI1 1328 aa7.17□□□□□ -1.26
SMAD3-209ENST00000558894 ZNF609O15014 1411 aa7.17□□□□□ -1.26
SMAD3-209ENST00000558894 H7C1W4 665 aa7.16□□□□□ -1.26
SMAD3-209ENST00000558894 PDE8AO60658 829 aa7.16□□□□□ -1.26
SMAD3-209ENST00000558894 VAMP4O75379 141 aa7.16□□□□□ -1.26
SMAD3-209ENST00000558894 RAD17O75943 681 aa7.16□□□□□ -1.26
SMAD3-209ENST00000558894 EGFRP00533 1210 aa7.16□□□□□ -1.26
SMAD3-209ENST00000558894 ZEB1P37275 1124 aaPredicted RBP7.16□□□□□ -1.26
SMAD3-209ENST00000558894 CASP7P55210 303 aa7.16□□□□□ -1.26
SMAD3-209ENST00000558894 CWF19L2Q2TBE0 894 aaKnown RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms